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The map label for this gene is 157960086

Identifier: 157960086

GI number: 157960086

Start: 287555

End: 288559

Strand: Reverse

Name: 157960086

Synonym: Spea_0257

Alternate gene names: NA

Gene position: 288559-287555 (Counterclockwise)

Preceding gene: 157960087

Following gene: 157960085

Centisome position: 5.58

GC content: 48.06

Gene sequence:

>1005_bases
ATGAAACGTATACTTTTGATTGGTGGCCTACTTCTTAGCAGCGTAACACACCAAACCTTTGCCGAAGAACGATGCGGCAA
AGTCACTATCGCTGATATGAATTGGAGCTCCGCTTCATTAATCGCGAATGTTGACCGCTTTATTTTAGAGCATGGTTATG
ACTGTGAAGCCGAGTTAATTCCAGGCGATACCATGCCCACCAGCACTTCGATGGTTGAAAAAGGAGAGCCTGATATCGCC
CCAGAAATCTGGAGTAACAGCGTCAAAGAACTTATCGAAAAAGCAGTCAATGATAAGCGCTTAATTATCGCAGGTAACTC
GCTATCCGATGGTGGTGAAGAAGGCTTCTGGGTTCCGCAGTACATGGTCGACAAAGATCCTAGCCTGAAAACCATTCAGG
GAGTCATAGCCAATGTAAAAACCTTTGAGCACCCAGAAGATCCTGATCGTGGTGCCTTTTATGGATGCCCTGCTGGCTGG
GGTTGCCAACTATCTGCAGAAAACCTGTTTCGCGCACTCAAGCTCGGTGATGCTGGATTTGATCTTATCGATCCCGGTTC
AGGAGCCGGTCTTGCTGGTTCTATTGCCCGAGCTTACGAACGCCAACAACCTTGGTTTGGCTACTATTGGGCCCCCACCG
CTGTATTAGGTAAGTACAAAATGGTCAAAGTGGACTTTGGTAGCGGTGTTGATACAGAGCATTTTCGCGACTGCACCTCT
CAAGTAGAGTGTGCCGCCCCTAAGGTCACCATGTACCCAGCTGCATTAGTGCAGACGGTCACCACCGCAGCATTCGCAGA
CAAATCAACCTCGGCATTCAAATACCTTAGTAAACGCGCCTTGACCAATGCGCAGATGAACAGCTTACTGGCGTGGATGG
AGAACAATCAGGCTGATGGCACTATCGCTGCCGAATATTTCCTAATCAATCATCAAGATATTTGGCTTGAATGGGTTCCA
GCTAACGTCGCCACAAAAGTGAAGCTGGCTATCGCAAACCTATAA

Upstream 100 bases:

>100_bases
TATTACCAGCAAGAATCCAGCATAGCCTCTAATTTGAACTCTAATAATTGTTGTGGGGCAGGTGCGTAAAGGAATACTCA
ACCTCGAGCACGGAGTTCTT

Downstream 100 bases:

>100_bases
CGCTAAATCGCTACGCGAGGCCTACTTCGCCTCGTGATCTGTCTTTTCACCTAGAAAATCCCTTAAAAAACTGGAGAGGT
AGCAATGGCTGACTTTTCTT

Product: substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKRILLIGGLLLSSVTHQTFAEERCGKVTIADMNWSSASLIANVDRFILEHGYDCEAELIPGDTMPTSTSMVEKGEPDIA
PEIWSNSVKELIEKAVNDKRLIIAGNSLSDGGEEGFWVPQYMVDKDPSLKTIQGVIANVKTFEHPEDPDRGAFYGCPAGW
GCQLSAENLFRALKLGDAGFDLIDPGSGAGLAGSIARAYERQQPWFGYYWAPTAVLGKYKMVKVDFGSGVDTEHFRDCTS
QVECAAPKVTMYPAALVQTVTTAAFADKSTSAFKYLSKRALTNAQMNSLLAWMENNQADGTIAAEYFLINHQDIWLEWVP
ANVATKVKLAIANL

Sequences:

>Translated_334_residues
MKRILLIGGLLLSSVTHQTFAEERCGKVTIADMNWSSASLIANVDRFILEHGYDCEAELIPGDTMPTSTSMVEKGEPDIA
PEIWSNSVKELIEKAVNDKRLIIAGNSLSDGGEEGFWVPQYMVDKDPSLKTIQGVIANVKTFEHPEDPDRGAFYGCPAGW
GCQLSAENLFRALKLGDAGFDLIDPGSGAGLAGSIARAYERQQPWFGYYWAPTAVLGKYKMVKVDFGSGVDTEHFRDCTS
QVECAAPKVTMYPAALVQTVTTAAFADKSTSAFKYLSKRALTNAQMNSLLAWMENNQADGTIAAEYFLINHQDIWLEWVP
ANVATKVKLAIANL
>Mature_334_residues
MKRILLIGGLLLSSVTHQTFAEERCGKVTIADMNWSSASLIANVDRFILEHGYDCEAELIPGDTMPTSTSMVEKGEPDIA
PEIWSNSVKELIEKAVNDKRLIIAGNSLSDGGEEGFWVPQYMVDKDPSLKTIQGVIANVKTFEHPEDPDRGAFYGCPAGW
GCQLSAENLFRALKLGDAGFDLIDPGSGAGLAGSIARAYERQQPWFGYYWAPTAVLGKYKMVKVDFGSGVDTEHFRDCTS
QVECAAPKVTMYPAALVQTVTTAAFADKSTSAFKYLSKRALTNAQMNSLLAWMENNQADGTIAAEYFLINHQDIWLEWVP
ANVATKVKLAIANL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36533; Mature: 36533

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILLIGGLLLSSVTHQTFAEERCGKVTIADMNWSSASLIANVDRFILEHGYDCEAELI
CCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEE
PGDTMPTSTSMVEKGEPDIAPEIWSNSVKELIEKAVNDKRLIIAGNSLSDGGEEGFWVPQ
CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCH
YMVDKDPSLKTIQGVIANVKTFEHPEDPDRGAFYGCPAGWGCQLSAENLFRALKLGDAGF
HEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEECHHHHHHHHHCCCCCC
DLIDPGSGAGLAGSIARAYERQQPWFGYYWAPTAVLGKYKMVKVDFGSGVDTEHFRDCTS
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHCCEEEEEEECCCCCCHHHHHHHHH
QVECAAPKVTMYPAALVQTVTTAAFADKSTSAFKYLSKRALTNAQMNSLLAWMENNQADG
HHHHCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TIAAEYFLINHQDIWLEWVPANVATKVKLAIANL
EEEEEEEEEECCEEEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MKRILLIGGLLLSSVTHQTFAEERCGKVTIADMNWSSASLIANVDRFILEHGYDCEAELI
CCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEE
PGDTMPTSTSMVEKGEPDIAPEIWSNSVKELIEKAVNDKRLIIAGNSLSDGGEEGFWVPQ
CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCH
YMVDKDPSLKTIQGVIANVKTFEHPEDPDRGAFYGCPAGWGCQLSAENLFRALKLGDAGF
HEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCEECHHHHHHHHHCCCCCC
DLIDPGSGAGLAGSIARAYERQQPWFGYYWAPTAVLGKYKMVKVDFGSGVDTEHFRDCTS
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHCCEEEEEEECCCCCCHHHHHHHHH
QVECAAPKVTMYPAALVQTVTTAAFADKSTSAFKYLSKRALTNAQMNSLLAWMENNQADG
HHHHCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TIAAEYFLINHQDIWLEWVPANVATKVKLAIANL
EEEEEEEEEECCEEEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA