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The map label for this gene is 157960045

Identifier: 157960045

GI number: 157960045

Start: 228156

End: 228449

Strand: Direct

Name: 157960045

Synonym: Spea_0216

Alternate gene names: NA

Gene position: 228156-228449 (Clockwise)

Preceding gene: 157960039

Following gene: 157960047

Centisome position: 4.41

GC content: 44.22

Gene sequence:

>294_bases
ATGAAAAAATTATTAGCACTGACTGCAGTGGCAGCTATGACTCTGTCTACAAGCGCACTTGCTCAAGATGGTAAAGCTGT
ATATGACAAGGCATGCCAAGTATGTCACAGCATGGGTGTTGCTGGTGCGCCAAAATCACATGACGCTGCAGCTTGGGAAC
CACGTCTAGGTAAAGGTATGGACGCTTTAGTATCTTCTGTTAAGTCAGGCCTAAACGCTATGCCACCAGGTGGTATGTGT
ACAGATTGCTCTGATGATGATTACAAGAATGCAATCGAGTATATGTCTAAGTAA

Upstream 100 bases:

>100_bases
TTTGTTGAACTTTGTAGTAACCTAGCCGTGCTATAACAAGTCTGCCAAAAATTTGAGGGCAGCGTGAGCTTTGTTAGAAT
TTGCATTAGGAACGTATAAA

Downstream 100 bases:

>100_bases
GCTTTAGCTAGACATCAAAAAGCCGGCCTAAGCCGGTTTTTTTGTGTCTAGAATTCAGGCGGCTATTATTAATGTACCAA
CGTTTGTAAGTGAACACTTA

Product: cytochrome c class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKKLLALTAVAAMTLSTSALAQDGKAVYDKACQVCHSMGVAGAPKSHDAAAWEPRLGKGMDALVSSVKSGLNAMPPGGMC
TDCSDDDYKNAIEYMSK

Sequences:

>Translated_97_residues
MKKLLALTAVAAMTLSTSALAQDGKAVYDKACQVCHSMGVAGAPKSHDAAAWEPRLGKGMDALVSSVKSGLNAMPPGGMC
TDCSDDDYKNAIEYMSK
>Mature_97_residues
MKKLLALTAVAAMTLSTSALAQDGKAVYDKACQVCHSMGVAGAPKSHDAAAWEPRLGKGMDALVSSVKSGLNAMPPGGMC
TDCSDDDYKNAIEYMSK

Specific function: It is unreactive with cytochrome c reductase or oxidase but seems to function as an intermediate in nitrate respiration of facultative anaerobic pseudmonads [H]

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR002323 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10056; Mature: 10056

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
11.3 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
11.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLALTAVAAMTLSTSALAQDGKAVYDKACQVCHSMGVAGAPKSHDAAAWEPRLGKGM
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
DALVSSVKSGLNAMPPGGMCTDCSDDDYKNAIEYMSK
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKLLALTAVAAMTLSTSALAQDGKAVYDKACQVCHSMGVAGAPKSHDAAAWEPRLGKGM
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
DALVSSVKSGLNAMPPGGMCTDCSDDDYKNAIEYMSK
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA