| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is exeL [H]
Identifier: 157959982
GI number: 157959982
Start: 167912
End: 169105
Strand: Direct
Name: exeL [H]
Synonym: Spea_0152
Alternate gene names: 157959982
Gene position: 167912-169105 (Clockwise)
Preceding gene: 157959981
Following gene: 157959983
Centisome position: 3.24
GC content: 47.32
Gene sequence:
>1194_bases GTGAGTGAAAGACTATTCATCCGCTTAGGTCAGACAGCCGAGCAGCCATGCTCTTGGCTAGTATGGTCTGAGCAGGAGCA AGAAATTATAGGTTCTGGTGAGCTAAGCGATGCCAGTGCTCTATCGACTCTTACTGAAAGAGCGGGTAATCGCGCGGTTG ACGTTTTAGTACCTGCTTCCAGCATTACATTAACCCATGTTGAGCTACCAGAGAAAAGCCAGCGGCAGGCCGTTAAGGCT TTACCTTTTATGCTGGAAGAGAACCTAGCTCAAAACGTAGATGAATTGCATTTTGTTACAGGGCCTCGCAATGGCGAGCA GCTAAGTATTGCCGTGGTGGCTCATGAACAGATGCAAGCTTGGATCGAATGGCTTAACGATGCCGGCCTTAAAGCAAAAT GTATCGTACCAGACTGTTTGGCACTGCCATTGGCCGAGTGCGACTGGGCTGCAATGAGTTTTGGCAAAGAGATTTTGCTG CGTACAGGCGAAGGTAGCGGTGTGAGTCTGACTCAGAGCTGGATGGATGTGGTGCTGCCACAGCTGTTAGCGACTGCAGA CCATGATAATACTACGGTTGCGGCATATACCGATCTACAAGTGAGCGGGGCGGAAGTGAAATCTCAGCCACTAGACCTGC CTATGCTAGTGCTAGCAAAAGGTATACTCAATGCGCCAATGAACCTACTTTCTGGGGTTTATAAACCGAAGAAAGAGTAT GGTAAGCATCTTGTTTTATGGCGTAATACGGCTATCGCATTCGGGATTGTGATCCTACTAGCCCTAGTGAACAAAGGACT TAATATTCATCAGATGAATAGCGATGCGGATAGGTTACAGGCGCAAAGCGAGCAGATCTATAAGCAGGTTGTTCCTGGGA GTTCACGAGTGGTGAACTTACGCTCTCAGATGGAAAGCTATGTTCGAACACTTCAAGGCGGCGGTAGTGGCAGCGAGTTT TTTGTCATGCTTAGTGGTATGCAAGAGGCTTTTGCTCAAGTGCCTGCACTTAAGCCAACCACCTTGCGCTTTGATAGTAA TCGTAACGAAATTCGTATGCAGGTTACTGCTAAGAATTATGAGCAGATAGAAAAGTTTAAAGAGATCATTGCGCGTTCTT ACAAGCTCGATGGTGGTGCGATGAATAGTGGTGAGTCTCAAGTCACCAGCACCTTAACCATAAGGAGCAAATAA
Upstream 100 bases:
>100_bases ACGGCGATAGTAAAAAATTAGAAGTGTTATCTCGCCAGTTTGGTGGGCAAAAATAACAACAGTCCTTTAATGAGTTGAAG AGACTTGTGGAGATAAATCA
Downstream 100 bases:
>100_bases GATGGAAAACTTTAAAGCTTGGTGGGGTGGATTGGTTCTTCGTGAGCAGCAGATGGTTGCGGCTTGTGGTGTGGTGTTAG TGATAGGCATTTTGTATTGG
Product: general secretion pathway protein L
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSERLFIRLGQTAEQPCSWLVWSEQEQEIIGSGELSDASALSTLTERAGNRAVDVLVPASSITLTHVELPEKSQRQAVKA LPFMLEENLAQNVDELHFVTGPRNGEQLSIAVVAHEQMQAWIEWLNDAGLKAKCIVPDCLALPLAECDWAAMSFGKEILL RTGEGSGVSLTQSWMDVVLPQLLATADHDNTTVAAYTDLQVSGAEVKSQPLDLPMLVLAKGILNAPMNLLSGVYKPKKEY GKHLVLWRNTAIAFGIVILLALVNKGLNIHQMNSDADRLQAQSEQIYKQVVPGSSRVVNLRSQMESYVRTLQGGGSGSEF FVMLSGMQEAFAQVPALKPTTLRFDSNRNEIRMQVTAKNYEQIEKFKEIIARSYKLDGGAMNSGESQVTSTLTIRSK
Sequences:
>Translated_397_residues MSERLFIRLGQTAEQPCSWLVWSEQEQEIIGSGELSDASALSTLTERAGNRAVDVLVPASSITLTHVELPEKSQRQAVKA LPFMLEENLAQNVDELHFVTGPRNGEQLSIAVVAHEQMQAWIEWLNDAGLKAKCIVPDCLALPLAECDWAAMSFGKEILL RTGEGSGVSLTQSWMDVVLPQLLATADHDNTTVAAYTDLQVSGAEVKSQPLDLPMLVLAKGILNAPMNLLSGVYKPKKEY GKHLVLWRNTAIAFGIVILLALVNKGLNIHQMNSDADRLQAQSEQIYKQVVPGSSRVVNLRSQMESYVRTLQGGGSGSEF FVMLSGMQEAFAQVPALKPTTLRFDSNRNEIRMQVTAKNYEQIEKFKEIIARSYKLDGGAMNSGESQVTSTLTIRSK >Mature_396_residues SERLFIRLGQTAEQPCSWLVWSEQEQEIIGSGELSDASALSTLTERAGNRAVDVLVPASSITLTHVELPEKSQRQAVKAL PFMLEENLAQNVDELHFVTGPRNGEQLSIAVVAHEQMQAWIEWLNDAGLKAKCIVPDCLALPLAECDWAAMSFGKEILLR TGEGSGVSLTQSWMDVVLPQLLATADHDNTTVAAYTDLQVSGAEVKSQPLDLPMLVLAKGILNAPMNLLSGVYKPKKEYG KHLVLWRNTAIAFGIVILLALVNKGLNIHQMNSDADRLQAQSEQIYKQVVPGSSRVVNLRSQMESYVRTLQGGGSGSEFF VMLSGMQEAFAQVPALKPTTLRFDSNRNEIRMQVTAKNYEQIEKFKEIIARSYKLDGGAMNSGESQVTSTLTIRSK
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3297
COG function: function code U; Type II secretory pathway, component PulL
Gene ontology:
Cell location: Cell inner membrane (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP L family [H]
Homologues:
Organism=Escherichia coli, GI87082244, Length=367, Percent_Identity=19.8910081743869, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007812 [H]
Pfam domain/function: PF05134 GspL [H]
EC number: NA
Molecular weight: Translated: 43646; Mature: 43514
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLFIRLGQTAEQPCSWLVWSEQEQEIIGSGELSDASALSTLTERAGNRAVDVLVPAS CCCCEEEEECCCCCCCCCEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECC SITLTHVELPEKSQRQAVKALPFMLEENLAQNVDELHFVTGPRNGEQLSIAVVAHEQMQA CEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCEEEEEEEEHHHHHH WIEWLNDAGLKAKCIVPDCLALPLAECDWAAMSFGKEILLRTGEGSGVSLTQSWMDVVLP HHHHHHCCCCEEEEECCHHHHCCCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHH QLLATADHDNTTVAAYTDLQVSGAEVKSQPLDLPMLVLAKGILNAPMNLLSGVYKPKKEY HHHHHCCCCCCEEEEEEEEEECCCHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHH GKHLVLWRNTAIAFGIVILLALVNKGLNIHQMNSDADRLQAQSEQIYKQVVPGSSRVVNL CCEEEEEECHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEHH RSQMESYVRTLQGGGSGSEFFVMLSGMQEAFAQVPALKPTTLRFDSNRNEIRMQVTAKNY HHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCH EQIEKFKEIIARSYKLDGGAMNSGESQVTSTLTIRSK HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure SERLFIRLGQTAEQPCSWLVWSEQEQEIIGSGELSDASALSTLTERAGNRAVDVLVPAS CCCEEEEECCCCCCCCCEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECC SITLTHVELPEKSQRQAVKALPFMLEENLAQNVDELHFVTGPRNGEQLSIAVVAHEQMQA CEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCEEEEEEEEHHHHHH WIEWLNDAGLKAKCIVPDCLALPLAECDWAAMSFGKEILLRTGEGSGVSLTQSWMDVVLP HHHHHHCCCCEEEEECCHHHHCCCCCCCHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHH QLLATADHDNTTVAAYTDLQVSGAEVKSQPLDLPMLVLAKGILNAPMNLLSGVYKPKKEY HHHHHCCCCCCEEEEEEEEEECCCHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHH GKHLVLWRNTAIAFGIVILLALVNKGLNIHQMNSDADRLQAQSEQIYKQVVPGSSRVVNL CCEEEEEECHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEHH RSQMESYVRTLQGGGSGSEFFVMLSGMQEAFAQVPALKPTTLRFDSNRNEIRMQVTAKNY HHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCH EQIEKFKEIIARSYKLDGGAMNSGESQVTSTLTIRSK HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]