| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is exeJ [H]
Identifier: 157959980
GI number: 157959980
Start: 166162
End: 166887
Strand: Direct
Name: exeJ [H]
Synonym: Spea_0150
Alternate gene names: 157959980
Gene position: 166162-166887 (Clockwise)
Preceding gene: 157959979
Following gene: 157959981
Centisome position: 3.21
GC content: 48.76
Gene sequence:
>726_bases ATGTGCTTAAGGCTGACTAAATCTCAGCGTGGCTTCACGCTACTAGAGATGCTGATCGCCATCGCCATTTTTGCCATGCT AGGTTTAGCGGCGAATACCGTGTTGAGCACAGTGATGAAAAACGACACCGCGACCCGAGATTTTGCCGCTAAGCTAAAGG CGATGCAGCAAGGTTTTGGAGTGATTGAGCGTGACTTAAACCAGATGGTCGCACGCACGCCTAGGTTATTAGAGGGCGGT AGAGCCACGACGGTTTTTCAGACGGGTAGCAATATGCTCGATTCGGAGTCTGAATCCTTAGTCTTTTTTCGCTTAGGTTG GCTAAATCCAGACGGACTCTTGCCAAGAGGCAGTTTGCAGTCGGTTGCCTATGTGGTGATGGAAGGGCAGTTGCAGCGTT GGTATTACCCTTATCCTGAACCGGAAATTGGTGCAGAGCCAATTAAAACTGTGATTATGGAGAAGGTGCTTTCAGTGGAA TACGCCTTTTTTACCGATGACAAATGGGAGCGTCAAACTGATGCAACTAAGTTACCCAAGGCGATTGCGATAGAAATTGA GTTTGAAGATATTGGTAAGGTGCAACGTAAATTCCTAGTGCCTAAGGGCGCGCTTGCTGGCAGTAACGATGATACCAATA GTGGTGGCGGAGACGAAGAGTCTATACCGGATGGAGACCGTAACAGCGGCAACGGTAGCGACACCGGAAAAGGGCATGGT GAATAA
Upstream 100 bases:
>100_bases AAAGAGGTCATTAAAACGACCGATGATAATTTTAGAATGATCCGTATAAGTGTTAGTGATGATGAACGCTTTGCTCGGGT CATTGCTGAGGTGAGCAGCT
Downstream 100 bases:
>100_bases TGCCTTCTAAACAACGTGGTGTAGCCCTTATTGTGGTGCTATTGATTGTGGCTATGGTAGCCATTATTGCGACCAATATT ACCTCGCGTAATCAATTATC
Product: general secretion pathway protein J
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MCLRLTKSQRGFTLLEMLIAIAIFAMLGLAANTVLSTVMKNDTATRDFAAKLKAMQQGFGVIERDLNQMVARTPRLLEGG RATTVFQTGSNMLDSESESLVFFRLGWLNPDGLLPRGSLQSVAYVVMEGQLQRWYYPYPEPEIGAEPIKTVIMEKVLSVE YAFFTDDKWERQTDATKLPKAIAIEIEFEDIGKVQRKFLVPKGALAGSNDDTNSGGGDEESIPDGDRNSGNGSDTGKGHG E
Sequences:
>Translated_241_residues MCLRLTKSQRGFTLLEMLIAIAIFAMLGLAANTVLSTVMKNDTATRDFAAKLKAMQQGFGVIERDLNQMVARTPRLLEGG RATTVFQTGSNMLDSESESLVFFRLGWLNPDGLLPRGSLQSVAYVVMEGQLQRWYYPYPEPEIGAEPIKTVIMEKVLSVE YAFFTDDKWERQTDATKLPKAIAIEIEFEDIGKVQRKFLVPKGALAGSNDDTNSGGGDEESIPDGDRNSGNGSDTGKGHG E >Mature_241_residues MCLRLTKSQRGFTLLEMLIAIAIFAMLGLAANTVLSTVMKNDTATRDFAAKLKAMQQGFGVIERDLNQMVARTPRLLEGG RATTVFQTGSNMLDSESESLVFFRLGWLNPDGLLPRGSLQSVAYVVMEGQLQRWYYPYPEPEIGAEPIKTVIMEKVLSVE YAFFTDDKWERQTDATKLPKAIAIEIEFEDIGKVQRKFLVPKGALAGSNDDTNSGGGDEESIPDGDRNSGNGSDTGKGHG E
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]
COG id: COG4795
COG function: function code U; Type II secretory pathway, component PulJ
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP J family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010055 - InterPro: IPR012902 - InterPro: IPR001120 [H]
Pfam domain/function: PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 26477; Mature: 26477
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLRLTKSQRGFTLLEMLIAIAIFAMLGLAANTVLSTVMKNDTATRDFAAKLKAMQQGFG CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VIERDLNQMVARTPRLLEGGRATTVFQTGSNMLDSESESLVFFRLGWLNPDGLLPRGSLQ HHHHHHHHHHHHCHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHH SVAYVVMEGQLQRWYYPYPEPEIGAEPIKTVIMEKVLSVEYAFFTDDKWERQTDATKLPK HHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHCCHHHCCC AIAIEIEFEDIGKVQRKFLVPKGALAGSNDDTNSGGGDEESIPDGDRNSGNGSDTGKGHG EEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC E C >Mature Secondary Structure MCLRLTKSQRGFTLLEMLIAIAIFAMLGLAANTVLSTVMKNDTATRDFAAKLKAMQQGFG CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VIERDLNQMVARTPRLLEGGRATTVFQTGSNMLDSESESLVFFRLGWLNPDGLLPRGSLQ HHHHHHHHHHHHCHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHH SVAYVVMEGQLQRWYYPYPEPEIGAEPIKTVIMEKVLSVEYAFFTDDKWERQTDATKLPK HHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHCCHHHCCC AIAIEIEFEDIGKVQRKFLVPKGALAGSNDDTNSGGGDEESIPDGDRNSGNGSDTGKGHG EEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]