| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is katE [C]
Identifier: 157959955
GI number: 157959955
Start: 136765
End: 138279
Strand: Direct
Name: katE [C]
Synonym: Spea_0125
Alternate gene names: 157959955
Gene position: 136765-138279 (Clockwise)
Preceding gene: 157959953
Following gene: 157959956
Centisome position: 2.64
GC content: 43.56
Gene sequence:
>1515_bases ATGGAAATTGTAAAAAAGGCTGGTTTGGCCCTATCGTTGAGCTTGGTTGTTGTGAATGTGCAGGCTGAAACGTTAACACG TGACAATGGTGCCCCAGTAGGAGACAACCAAAACTCAATCACTGCGGGGAGTAACGGCAGTGTGCTGCTACAAGATGTCC AGTTGATCCAGAAGTTACAGAGATTTGCGCGTGAGCGGATCCCTGAGCGCGTAGTTCACGCTAGAGGAACTGGTGTACAT GGGGAGTTTATTGCTAGTAGTGATTTGAGTGAGTTAACACAGGCCGCACCGTTTGCTGAAAAAGGCAAAATTACTCCGGT ATTCGTACGCTTTTCAACAGTTATTCATTCAAAAGGTTCGCCAGAAACTCTACGGGACCCTAGAGGTTTTGCGACTCGTT TTTACTCAGATCAAGGTAACTGGGATCTTGTGGGGAACAACTTGCCGGTGTTCTTTATCCGTGATGCGATAAAGTTTCCA GATATGGTGCACTCACTTAAGCCGTCGCCTATTACTAATCTACAGGACCCAAATCGCTTTTTTGATTTTTTCAGTCATGA AGCTACAGCAACAAATATGCTGACTTGGGTTTATACCAACTTAGGTACTCCTGCTAGCTACCGAAAAATGGACGGTTGGG GAGTGCATGCATATAAATTTATTAACGATGAGCATCAGGTTAAATACGTAAAGTTTCATTGGAAAAGCCAACAAGGTGTA GAAGGGCTAAGGCCTGATGAAGTCGTTAAAACTCAAGGCCAGAATTTTAACCATCTAACAGACGACCTTTATAGCGAGAT TAACAAGGGCAACTTCCCAAAATGGGATCTTATGGTCAAGGTATTGCGCCCAGAGGATTTGAACAAGTTTGATTACAACC CACTTGATGCAACAAAAATGTGGCTGGATGTACCAGAAACTAAAGTGGGCACTATGACGCTCAATCGCGTCCCGGATAAC TTCTTTCAGGAAACAGAACAGGCAGCTTTTGCGCCTTCAAACTTAATACCCGGTATTGAACCTTCGGAAGATAAGTTGCT TCAGGGACGTATTTTTTCCTATGCCGATACTCAGCTTTATCGTTTAGGTGCCAACTTGTCTCAATTGCCAATTAACCAAC CTAAGATGGCTGTGGCAAATCATAATCAAGAAGGGGCAGCTAATTATGGTCGTACAAGCTCTGATGTGAATTATCAACCT AGCACTAAGCTCGCATTAGCTGAAGATCATCGTTATCGAGCCGTACAAACACCCCTATCGGGCACAGTTCTGCAAGCGGT TATTGCTAAACAAGATAATTTCACTCAGGCGGGCGTGCTTTACCGTAGTTTGAGTAAACAAGATAAGCGCGATCTTATTA CCAATTTATCTGCTGACTTAGGCAAGGTGACAGACAGTCATGTTAAGCATCAAATGTTGAGTTATTTCTATCAGGCGGAT AAGGACTTTGGTAAGCGTTTAACGCAAGCTGTGGCGGGTGATTTAAATGAAGTGAAAAAACTCGCCAATATGTAG
Upstream 100 bases:
>100_bases CGATACAACCAATCGATAAAGGTTGCTTCTTTTAATCGACATTATCGCTCAAACTGTTTTTGGGCAGAAAGAGCGTGCGT TGTTAATTAAGAGAATACTC
Downstream 100 bases:
>100_bases CTAGTAACTAACTCTATAGGTTAACGCTTAATGGGCCGGCGTTAACAGTTCCCGAGTCAGTCTCTTGATTCGGTTTCTCG AGTAAGTCCCGTAAGGCGTG
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MEIVKKAGLALSLSLVVVNVQAETLTRDNGAPVGDNQNSITAGSNGSVLLQDVQLIQKLQRFARERIPERVVHARGTGVH GEFIASSDLSELTQAAPFAEKGKITPVFVRFSTVIHSKGSPETLRDPRGFATRFYSDQGNWDLVGNNLPVFFIRDAIKFP DMVHSLKPSPITNLQDPNRFFDFFSHEATATNMLTWVYTNLGTPASYRKMDGWGVHAYKFINDEHQVKYVKFHWKSQQGV EGLRPDEVVKTQGQNFNHLTDDLYSEINKGNFPKWDLMVKVLRPEDLNKFDYNPLDATKMWLDVPETKVGTMTLNRVPDN FFQETEQAAFAPSNLIPGIEPSEDKLLQGRIFSYADTQLYRLGANLSQLPINQPKMAVANHNQEGAANYGRTSSDVNYQP STKLALAEDHRYRAVQTPLSGTVLQAVIAKQDNFTQAGVLYRSLSKQDKRDLITNLSADLGKVTDSHVKHQMLSYFYQAD KDFGKRLTQAVAGDLNEVKKLANM
Sequences:
>Translated_504_residues MEIVKKAGLALSLSLVVVNVQAETLTRDNGAPVGDNQNSITAGSNGSVLLQDVQLIQKLQRFARERIPERVVHARGTGVH GEFIASSDLSELTQAAPFAEKGKITPVFVRFSTVIHSKGSPETLRDPRGFATRFYSDQGNWDLVGNNLPVFFIRDAIKFP DMVHSLKPSPITNLQDPNRFFDFFSHEATATNMLTWVYTNLGTPASYRKMDGWGVHAYKFINDEHQVKYVKFHWKSQQGV EGLRPDEVVKTQGQNFNHLTDDLYSEINKGNFPKWDLMVKVLRPEDLNKFDYNPLDATKMWLDVPETKVGTMTLNRVPDN FFQETEQAAFAPSNLIPGIEPSEDKLLQGRIFSYADTQLYRLGANLSQLPINQPKMAVANHNQEGAANYGRTSSDVNYQP STKLALAEDHRYRAVQTPLSGTVLQAVIAKQDNFTQAGVLYRSLSKQDKRDLITNLSADLGKVTDSHVKHQMLSYFYQAD KDFGKRLTQAVAGDLNEVKKLANM >Mature_504_residues MEIVKKAGLALSLSLVVVNVQAETLTRDNGAPVGDNQNSITAGSNGSVLLQDVQLIQKLQRFARERIPERVVHARGTGVH GEFIASSDLSELTQAAPFAEKGKITPVFVRFSTVIHSKGSPETLRDPRGFATRFYSDQGNWDLVGNNLPVFFIRDAIKFP DMVHSLKPSPITNLQDPNRFFDFFSHEATATNMLTWVYTNLGTPASYRKMDGWGVHAYKFINDEHQVKYVKFHWKSQQGV EGLRPDEVVKTQGQNFNHLTDDLYSEINKGNFPKWDLMVKVLRPEDLNKFDYNPLDATKMWLDVPETKVGTMTLNRVPDN FFQETEQAAFAPSNLIPGIEPSEDKLLQGRIFSYADTQLYRLGANLSQLPINQPKMAVANHNQEGAANYGRTSSDVNYQP STKLALAEDHRYRAVQTPLSGTVLQAVIAKQDNFTQAGVLYRSLSKQDKRDLITNLSADLGKVTDSHVKHQMLSYFYQAD KDFGKRLTQAVAGDLNEVKKLANM
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=484, Percent_Identity=38.8429752066116, Blast_Score=355, Evalue=4e-98, Organism=Escherichia coli, GI48994891, Length=500, Percent_Identity=38.4, Blast_Score=344, Evalue=9e-96, Organism=Caenorhabditis elegans, GI25151141, Length=480, Percent_Identity=40.625, Blast_Score=384, Evalue=1e-107, Organism=Caenorhabditis elegans, GI25147792, Length=478, Percent_Identity=40.5857740585774, Blast_Score=383, Evalue=1e-106, Organism=Caenorhabditis elegans, GI71998444, Length=475, Percent_Identity=40, Blast_Score=379, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6320462, Length=486, Percent_Identity=36.6255144032922, Blast_Score=300, Evalue=3e-82, Organism=Saccharomyces cerevisiae, GI6321525, Length=532, Percent_Identity=34.0225563909774, Blast_Score=298, Evalue=1e-81, Organism=Drosophila melanogaster, GI17981717, Length=480, Percent_Identity=40, Blast_Score=364, Evalue=1e-101, Organism=Drosophila melanogaster, GI19920968, Length=480, Percent_Identity=38.125, Blast_Score=351, Evalue=6e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 56556; Mature: 56556
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIVKKAGLALSLSLVVVNVQAETLTRDNGAPVGDNQNSITAGSNGSVLLQDVQLIQKLQ CCCHHHCCCEEEEEEEEEEEEHHHEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHH RFARERIPERVVHARGTGVHGEFIASSDLSELTQAAPFAEKGKITPVFVRFSTVIHSKGS HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCEEEEEEEHHHHCCCC PETLRDPRGFATRFYSDQGNWDLVGNNLPVFFIRDAIKFPDMVHSLKPSPITNLQDPNRF CCHHCCCCCHHHHEECCCCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHH FDFFSHEATATNMLTWVYTNLGTPASYRKMDGWGVHAYKFINDEHQVKYVKFHWKSQQGV HHHHHCCHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCC EGLRPDEVVKTQGQNFNHLTDDLYSEINKGNFPKWDLMVKVLRPEDLNKFDYNPLDATKM CCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCCCCCCHHHH WLDVPETKVGTMTLNRVPDNFFQETEQAAFAPSNLIPGIEPSEDKLLQGRIFSYADTQLY EEECCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHH RLGANLSQLPINQPKMAVANHNQEGAANYGRTSSDVNYQPSTKLALAEDHRYRAVQTPLS HHCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCC GTVLQAVIAKQDNFTQAGVLYRSLSKQDKRDLITNLSADLGKVTDSHVKHQMLSYFYQAD HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDFGKRLTQAVAGDLNEVKKLANM HHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MEIVKKAGLALSLSLVVVNVQAETLTRDNGAPVGDNQNSITAGSNGSVLLQDVQLIQKLQ CCCHHHCCCEEEEEEEEEEEEHHHEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHH RFARERIPERVVHARGTGVHGEFIASSDLSELTQAAPFAEKGKITPVFVRFSTVIHSKGS HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCEEEEEEEHHHHCCCC PETLRDPRGFATRFYSDQGNWDLVGNNLPVFFIRDAIKFPDMVHSLKPSPITNLQDPNRF CCHHCCCCCHHHHEECCCCCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHH FDFFSHEATATNMLTWVYTNLGTPASYRKMDGWGVHAYKFINDEHQVKYVKFHWKSQQGV HHHHHCCHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCC EGLRPDEVVKTQGQNFNHLTDDLYSEINKGNFPKWDLMVKVLRPEDLNKFDYNPLDATKM CCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCCCCCCHHHH WLDVPETKVGTMTLNRVPDNFFQETEQAAFAPSNLIPGIEPSEDKLLQGRIFSYADTQLY EEECCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHH RLGANLSQLPINQPKMAVANHNQEGAANYGRTSSDVNYQPSTKLALAEDHRYRAVQTPLS HHCCCHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCC GTVLQAVIAKQDNFTQAGVLYRSLSKQDKRDLITNLSADLGKVTDSHVKHQMLSYFYQAD HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDFGKRLTQAVAGDLNEVKKLANM HHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]