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The map label for this gene is cc4 [H]

Identifier: 157959930

GI number: 157959930

Start: 111657

End: 112277

Strand: Reverse

Name: cc4 [H]

Synonym: Spea_0100

Alternate gene names: 157959930

Gene position: 112277-111657 (Counterclockwise)

Preceding gene: 157959932

Following gene: 157959929

Centisome position: 2.17

GC content: 44.28

Gene sequence:

>621_bases
ATGAAAAAGTTAGCTCTTGCGCTGTCTGTTTTAGCCACAATCTCTTTACCTGCAATGGCCGAAGGAAATGCCGAAGCCGG
AAAAACTAAAGCCATTGTTTGTTCTGCTTGTCACGGTGTTGACGGCAACAGCATGATAGACATGTATCCTAAACTTGCAG
GTCAACACGTTACCTACCTAGAAAAGCAGCTACATGATTTCCGCAGTGCAGCACAAACTGGTGGAAAAGAAGGTCGTATG
GACCCAATCATGGGCGGCATGTCTGTCACTCTGAGCGATCAAGATATCGCAGACATTTCTGCCTTTTATGCTAGCCAAGA
AAACAAAGATATCGAAGTTAAAGATATCCCAGAACTAGGAGCACAGCTCTATACCACCGGTGACTCGGCTCGCGGCATCA
CAGCCTGTATCGCTTGTCATGGTCCTGAAGGTAAAGGAACTGAGCTTGCAGGCTTCCCTGCAATCAACAGCCAACATGCA
AATTATATCAAGATCCAGCTAAATAAGTTCCACGATACAAATCGTAACAACGACTTAAATGGCATGATGCAAGACGTCGC
GAAAAAGTTAAATGCAGCCGACATCGAAGCATTATCTAAATATATATCAAGCCTTAAGTAA

Upstream 100 bases:

>100_bases
GTGTAAAATATTACCCCGATCACATAAAATACATTTTATCACGCTTGCGGGTCTTCCTAGTAAGCTCAAGACAAATATTT
TAATAAGAAGTTGGAACGCC

Downstream 100 bases:

>100_bases
ATATTAGCTAGATCTTAAGAGGACGGTTTCACCGTCCTTTTTTATATCATCCTGTTTACGTTTACGTAAACTTCAAGCAA
AACCCTCTTGACAGAGATCA

Product: cytochrome c class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKKLALALSVLATISLPAMAEGNAEAGKTKAIVCSACHGVDGNSMIDMYPKLAGQHVTYLEKQLHDFRSAAQTGGKEGRM
DPIMGGMSVTLSDQDIADISAFYASQENKDIEVKDIPELGAQLYTTGDSARGITACIACHGPEGKGTELAGFPAINSQHA
NYIKIQLNKFHDTNRNNDLNGMMQDVAKKLNAADIEALSKYISSLK

Sequences:

>Translated_206_residues
MKKLALALSVLATISLPAMAEGNAEAGKTKAIVCSACHGVDGNSMIDMYPKLAGQHVTYLEKQLHDFRSAAQTGGKEGRM
DPIMGGMSVTLSDQDIADISAFYASQENKDIEVKDIPELGAQLYTTGDSARGITACIACHGPEGKGTELAGFPAINSQHA
NYIKIQLNKFHDTNRNNDLNGMMQDVAKKLNAADIEALSKYISSLK
>Mature_206_residues
MKKLALALSVLATISLPAMAEGNAEAGKTKAIVCSACHGVDGNSMIDMYPKLAGQHVTYLEKQLHDFRSAAQTGGKEGRM
DPIMGGMSVTLSDQDIADISAFYASQENKDIEVKDIPELGAQLYTTGDSARGITACIACHGPEGKGTELAGFPAINSQHA
NYIKIQLNKFHDTNRNNDLNGMMQDVAKKLNAADIEALSKYISSLK

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21991; Mature: 21991

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLALALSVLATISLPAMAEGNAEAGKTKAIVCSACHGVDGNSMIDMYPKLAGQHVTYL
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHH
EKQLHDFRSAAQTGGKEGRMDPIMGGMSVTLSDQDIADISAFYASQENKDIEVKDIPELG
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHC
AQLYTTGDSARGITACIACHGPEGKGTELAGFPAINSQHANYIKIQLNKFHDTNRNNDLN
CEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH
GMMQDVAKKLNAADIEALSKYISSLK
HHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLALALSVLATISLPAMAEGNAEAGKTKAIVCSACHGVDGNSMIDMYPKLAGQHVTYL
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHH
EKQLHDFRSAAQTGGKEGRMDPIMGGMSVTLSDQDIADISAFYASQENKDIEVKDIPELG
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHC
AQLYTTGDSARGITACIACHGPEGKGTELAGFPAINSQHANYIKIQLNKFHDTNRNNDLN
CEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHH
GMMQDVAKKLNAADIEALSKYISSLK
HHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]