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The map label for this gene is flgF [H]

Identifier: 157959901

GI number: 157959901

Start: 83843

End: 84568

Strand: Reverse

Name: flgF [H]

Synonym: Spea_0071

Alternate gene names: 157959901

Gene position: 84568-83843 (Counterclockwise)

Preceding gene: 157959902

Following gene: 157959900

Centisome position: 1.63

GC content: 53.44

Gene sequence:

>726_bases
ATGCTATATACCGCAGCGAGTGGTGCGTCACGGGTAATGGAGGCGCAGGCAATACGCGCCAATAACCTAGCCAATGCTGA
TACAACGGGTTTCAAGGCCGATCTTGAACGGGTCAATGCCAAGGTCATAGCTCCAATTGGAGACAGCCTACAGACTCGCG
TACTCGCTCAAACACAGGGCAGCGGATTCAGCCGACAAAGCGGCACCCTGAACCCCACTGGCCGCACGCTTGATCTGGCG
ATCAACAATGCAGGTCTGTTCTCGGTAATGACGGCTGAGGGAGAGGGTTACACCCGCGCAGGTGCTATGACTGCAGATGC
AACCGGCCAGCTAACCCTAGATGGTCGCCCCGTTGCTGGGTTAGCGGGTCCAATTGTACTGCCAGAGTACCGTGAACTCT
TCATTGGCGATGACGGCAGAATTAACATTATTGCCGACGCCGATGGTGTTATCGAAGAAGTTGGCCAGCTTAAGCTGGTT
AATCCAGATATCGCCCTAATGAGTAAAGGCTTAGACGGTTTGCTTTACCCACAAGACCGCCAGCCTTTACCCGCTAGCGA
AGAAGTGACGGTAAGCAGTGGCTTTTTAGAAGCCAGTAATGTGCAGGCTGTCGGTGAATTAATTGCAGCAATGGATTTAA
GCCGCCAGTTCGAGGTGCAAGTCAAACTCATGAAGAGCGCCGAAAAGCTCGCAGAGGCGGGTAATCGCCTACTGCGTGAT
GCGTAG

Upstream 100 bases:

>100_bases
GGCTCAGCGTAACTACCAGTCCAATGCCAAGGTGCTTGATACCAACTCAACCATGCAACAAGCCTTGTTAAACGCAATCT
AGGAATAATCCGTGGACAGA

Downstream 100 bases:

>100_bases
ACCATATTTTTAAGGACACACTAGATGCAATCAGCTTTATGGGTCAGTAAAACCGGCTTAACCGCCCAAGATACTAAGAT
GACCACCATTGCCAACAACT

Product: flagellar basal-body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLYTAASGASRVMEAQAIRANNLANADTTGFKADLERVNAKVIAPIGDSLQTRVLAQTQGSGFSRQSGTLNPTGRTLDLA
INNAGLFSVMTAEGEGYTRAGAMTADATGQLTLDGRPVAGLAGPIVLPEYRELFIGDDGRINIIADADGVIEEVGQLKLV
NPDIALMSKGLDGLLYPQDRQPLPASEEVTVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSAEKLAEAGNRLLRD
A

Sequences:

>Translated_241_residues
MLYTAASGASRVMEAQAIRANNLANADTTGFKADLERVNAKVIAPIGDSLQTRVLAQTQGSGFSRQSGTLNPTGRTLDLA
INNAGLFSVMTAEGEGYTRAGAMTADATGQLTLDGRPVAGLAGPIVLPEYRELFIGDDGRINIIADADGVIEEVGQLKLV
NPDIALMSKGLDGLLYPQDRQPLPASEEVTVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSAEKLAEAGNRLLRD
A
>Mature_241_residues
MLYTAASGASRVMEAQAIRANNLANADTTGFKADLERVNAKVIAPIGDSLQTRVLAQTQGSGFSRQSGTLNPTGRTLDLA
INNAGLFSVMTAEGEGYTRAGAMTADATGQLTLDGRPVAGLAGPIVLPEYRELFIGDDGRINIIADADGVIEEVGQLKLV
NPDIALMSKGLDGLLYPQDRQPLPASEEVTVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSAEKLAEAGNRLLRD
A

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=247, Percent_Identity=40.4858299595142, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=28.8461538461538, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25348; Mature: 25348

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYTAASGASRVMEAQAIRANNLANADTTGFKADLERVNAKVIAPIGDSLQTRVLAQTQG
CEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEECCCCCHHHEEEEECCC
SGFSRQSGTLNPTGRTLDLAINNAGLFSVMTAEGEGYTRAGAMTADATGQLTLDGRPVAG
CCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEECCCEEECCCCEEEECCCCCCC
LAGPIVLPEYRELFIGDDGRINIIADADGVIEEVGQLKLVNPDIALMSKGLDGLLYPQDR
CCCCEECCCCCEEEECCCCCEEEEECCCHHHHHCCCEEEECCCHHHHHCCCCCCCCCCCC
QPLPASEEVTVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSAEKLAEAGNRLLRD
CCCCCCCCEEEECCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
A
C
>Mature Secondary Structure
MLYTAASGASRVMEAQAIRANNLANADTTGFKADLERVNAKVIAPIGDSLQTRVLAQTQG
CEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEECCCCCHHHEEEEECCC
SGFSRQSGTLNPTGRTLDLAINNAGLFSVMTAEGEGYTRAGAMTADATGQLTLDGRPVAG
CCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCEEECCCEEECCCCEEEECCCCCCC
LAGPIVLPEYRELFIGDDGRINIIADADGVIEEVGQLKLVNPDIALMSKGLDGLLYPQDR
CCCCEECCCCCEEEECCCCCEEEEECCCHHHHHCCCEEEECCCHHHHHCCCCCCCCCCCC
QPLPASEEVTVSSGFLEASNVQAVGELIAAMDLSRQFEVQVKLMKSAEKLAEAGNRLLRD
CCCCCCCCEEEECCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]