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The map label for this gene is lafA [H]

Identifier: 157959893

GI number: 157959893

Start: 76202

End: 77020

Strand: Reverse

Name: lafA [H]

Synonym: Spea_0063

Alternate gene names: 157959893

Gene position: 77020-76202 (Counterclockwise)

Preceding gene: 157959894

Following gene: 157959892

Centisome position: 1.49

GC content: 45.05

Gene sequence:

>819_bases
ATGTTATCTGTAATGACTAACAATGCGTCAAACATCGCTCAAAACTCAGTAAACAGAAACAACGACCTACTAAGCAATGC
TATGGAGCGTTTATCAACAGGTCTACGTATCAACAGCGCGGCTGACGATGCTGCAGGCCTACAAATTGCTTCACGCATGG
AAGCTAACGTAACTGGTATGGAAACAGCAAACCGTAACGTATCTGACGCAACTTCTATGCTACAGACTGCCGATGGTGCG
CTAGATGAACTAGCTACTATTGCGAATCGTCAAAAAGAATTGGCTACTCAAGCAGCTAACGGCGTGAACTCTACTGCAGA
TAGAGCTGCACTGAACGATGAGTTCACAGCACTGACTGCTGAAATGACTCGTATCATGGAAAAAACTACTTATGCGGGCA
ACGATCTGTTTGGCGCTATCTCTGGTAATGTCAGCTTCCAAATCGGTGCAGGTTCAGGTGAAACCCTAACTGTTAGCGGC
GCTTCTGGCATTACGGGCATTAGATCTGGAATTGCAACATTATCAGGCGTTAAAGCTTCTACTCTTGGTGCTCAAATCGG
TGAAATCGATGACTTTATTGACGCCGTTGGCTCAATGCGTTCTGACCTAGGTGCTAACATTAACCGTCTTGGTCACACAG
CATCTAACCTAACTAACGTTACCGAGAACACTAAAGCGGCTGCTGGCCGTATCATGGATGCCGACTTCGCTTCAGAAACT
GCAGCTATGAGTAAGAACCAGTTATTAGTACAAGCTGGTACCAACATTCTATCTTCATCAAACCAAAATACTGGTTTGGT
TATGGGTCTATTGGGTTAA

Upstream 100 bases:

>100_bases
CATTTATTTTATTTTCACTCTCAATCTTCAGTTTTAAGATTCAATGTCGTTTTATTATTTAAGACACCAACCAAATAATT
AAAATTTAAAGGAAGCACCC

Downstream 100 bases:

>100_bases
TCCCTTACTTTCTCCACACTTTTTTAAAAGGGCCTCACGGCCCTTTTTTTTGCCGTTTATCTTATAAATTCCAGCCCCAT
AGCTTTAGCAAGCCTGTAGT

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MLSVMTNNASNIAQNSVNRNNDLLSNAMERLSTGLRINSAADDAAGLQIASRMEANVTGMETANRNVSDATSMLQTADGA
LDELATIANRQKELATQAANGVNSTADRAALNDEFTALTAEMTRIMEKTTYAGNDLFGAISGNVSFQIGAGSGETLTVSG
ASGITGIRSGIATLSGVKASTLGAQIGEIDDFIDAVGSMRSDLGANINRLGHTASNLTNVTENTKAAAGRIMDADFASET
AAMSKNQLLVQAGTNILSSSNQNTGLVMGLLG

Sequences:

>Translated_272_residues
MLSVMTNNASNIAQNSVNRNNDLLSNAMERLSTGLRINSAADDAAGLQIASRMEANVTGMETANRNVSDATSMLQTADGA
LDELATIANRQKELATQAANGVNSTADRAALNDEFTALTAEMTRIMEKTTYAGNDLFGAISGNVSFQIGAGSGETLTVSG
ASGITGIRSGIATLSGVKASTLGAQIGEIDDFIDAVGSMRSDLGANINRLGHTASNLTNVTENTKAAAGRIMDADFASET
AAMSKNQLLVQAGTNILSSSNQNTGLVMGLLG
>Mature_272_residues
MLSVMTNNASNIAQNSVNRNNDLLSNAMERLSTGLRINSAADDAAGLQIASRMEANVTGMETANRNVSDATSMLQTADGA
LDELATIANRQKELATQAANGVNSTADRAALNDEFTALTAEMTRIMEKTTYAGNDLFGAISGNVSFQIGAGSGETLTVSG
ASGITGIRSGIATLSGVKASTLGAQIGEIDDFIDAVGSMRSDLGANINRLGHTASNLTNVTENTKAAAGRIMDADFASET
AAMSKNQLLVQAGTNILSSSNQNTGLVMGLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Essential for lateral flagellar synthesis and swarming motility [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=155, Percent_Identity=41.2903225806452, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 27901; Mature: 27901

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSVMTNNASNIAQNSVNRNNDLLSNAMERLSTGLRINSAADDAAGLQIASRMEANVTGM
CCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCC
ETANRNVSDATSMLQTADGALDELATIANRQKELATQAANGVNSTADRAALNDEFTALTA
HHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHH
EMTRIMEKTTYAGNDLFGAISGNVSFQIGAGSGETLTVSGASGITGIRSGIATLSGVKAS
HHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCHHH
TLGAQIGEIDDFIDAVGSMRSDLGANINRLGHTASNLTNVTENTKAAAGRIMDADFASET
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCHHCCHHHHHH
AAMSKNQLLVQAGTNILSSSNQNTGLVMGLLG
HHHCCCCEEEECCCHHHHCCCCCCCEEEEECC
>Mature Secondary Structure
MLSVMTNNASNIAQNSVNRNNDLLSNAMERLSTGLRINSAADDAAGLQIASRMEANVTGM
CCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCC
ETANRNVSDATSMLQTADGALDELATIANRQKELATQAANGVNSTADRAALNDEFTALTA
HHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHH
EMTRIMEKTTYAGNDLFGAISGNVSFQIGAGSGETLTVSGASGITGIRSGIATLSGVKAS
HHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCHHH
TLGAQIGEIDDFIDAVGSMRSDLGANINRLGHTASNLTNVTENTKAAAGRIMDADFASET
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCHHCCHHHHHH
AAMSKNQLLVQAGTNILSSSNQNTGLVMGLLG
HHHCCCCEEEECCCHHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]