| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157959889
Identifier: 157959889
GI number: 157959889
Start: 72616
End: 73788
Strand: Reverse
Name: 157959889
Synonym: Spea_0059
Alternate gene names: NA
Gene position: 73788-72616 (Counterclockwise)
Preceding gene: 157959890
Following gene: 157959888
Centisome position: 1.43
GC content: 48.76
Gene sequence:
>1173_bases ATGATTAATAACTCGGTTTTATCAGGCTGCACAGCTCAAGCGTCAACGACTAGCGGTCAACTATCAACGCAAATAAAAAG CCATAGCTGTAATCACAATGACGACCCGCTTGAACAACATCAAGCGGACGTATTGCCGTTCTCGTTGGCTTTCGCTTCAA TTGACACCACTGACGCAAGTCAACTGAGTCAAATACCACCTGGGTTATTGGCAGCAACCTCAACGGGTTCAGCCTTCTCA GCTCAGAAAAACGCAACAACTTCGTTTTCTGCAGGCCATTATGGACAGCAGCCACCAGCATCCTTGCAAACTCAGTCTGT TGCTAACTTAACGACTGGCTTAACTGCGGCTCAGGATACGAGTGCACAGGCTTTACCGTTTTTGGAAGGCTCACCGCTCG CCCCTAAGCTGTCAACAGCGCCCCCAAGCTCACAATACTCTAGCGCACAAGCTGTAAACCTGTCGATTGGATCACAGGGA ACAGGGCAAGCACAGACAAACTCGCTTTCGACGAGCAGCTACCAACAGTTGTCATCCCAGGCTAACTCTGTCACGCCCCA GACTAGCTTGCCTCAGCAAACTGGAACGCTAAAGAGTGACACCATGATGAGCCAGAGTTTATTTCAAGCAATGAACTCGC CACTGCAAGCATCAATAACCGATACCGCTTCCGTAGACATTGTTGACTCTGTTAACCAGATTTTGGCATCGAGTACTCGT TCGCAAACAGCTGTCGCACAGTGGGGACCGGTTGCGGTTTCTCAGACAGCTCCTTTGTTGCAACAAGCTCATGAGATGCT ATCTCCTCTACGAGAGCAATTGAAGTTTCAAATCGATCAACAAATTAAGCAGGCCGAAATCAGGCTCGATCCGCCCGAGC TAGGTAAGGTTGAGCTCAATGTACGCTTAGACGGTGATCGCTTACACATTCAAATGCATGCCGCGAACTCATCGGTGCGC GACGCTCTATTAATGGGCCTAGATAGATTACGCGCCGAGCTAGCAATGGATCATGGTGGTCAGATTGATGTCGATATTAG TCAGGATGACCGCCCTCAAAAGCAAGATACACAAGCGTCTGACTTCGCTATTGCTGCCGCGACAAACAATGGAACAGAAA CGTCTTTTAACAGCCACTCTCAACAACAAGATCACGTGGATCTGTTAGCATAA
Upstream 100 bases:
>100_bases GTACAAGCAAAAGATCAGTTAGGGCAAGAGATGAATCAATTTAAGCAGCAACAAGACGGTCTAGCGGCTTATCAGCTGAC CAGTGTCAGTGGTGGTGCTT
Downstream 100 bases:
>100_bases TTTAGGAGAAACTCATGGCGTCGATGAACAAACAAGGCAAGAGACTCGCTCTCGTTTTGCTTTTTCTGACTTGGACAGGT GCAACATTCTGGGTTGGTTG
Product: flagellar hook-length control protein
Products: NA
Alternate protein names: Flagellar Hook-Length Control Protein FliK; LafE Protein
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MINNSVLSGCTAQASTTSGQLSTQIKSHSCNHNDDPLEQHQADVLPFSLAFASIDTTDASQLSQIPPGLLAATSTGSAFS AQKNATTSFSAGHYGQQPPASLQTQSVANLTTGLTAAQDTSAQALPFLEGSPLAPKLSTAPPSSQYSSAQAVNLSIGSQG TGQAQTNSLSTSSYQQLSSQANSVTPQTSLPQQTGTLKSDTMMSQSLFQAMNSPLQASITDTASVDIVDSVNQILASSTR SQTAVAQWGPVAVSQTAPLLQQAHEMLSPLREQLKFQIDQQIKQAEIRLDPPELGKVELNVRLDGDRLHIQMHAANSSVR DALLMGLDRLRAELAMDHGGQIDVDISQDDRPQKQDTQASDFAIAAATNNGTETSFNSHSQQQDHVDLLA
Sequences:
>Translated_390_residues MINNSVLSGCTAQASTTSGQLSTQIKSHSCNHNDDPLEQHQADVLPFSLAFASIDTTDASQLSQIPPGLLAATSTGSAFS AQKNATTSFSAGHYGQQPPASLQTQSVANLTTGLTAAQDTSAQALPFLEGSPLAPKLSTAPPSSQYSSAQAVNLSIGSQG TGQAQTNSLSTSSYQQLSSQANSVTPQTSLPQQTGTLKSDTMMSQSLFQAMNSPLQASITDTASVDIVDSVNQILASSTR SQTAVAQWGPVAVSQTAPLLQQAHEMLSPLREQLKFQIDQQIKQAEIRLDPPELGKVELNVRLDGDRLHIQMHAANSSVR DALLMGLDRLRAELAMDHGGQIDVDISQDDRPQKQDTQASDFAIAAATNNGTETSFNSHSQQQDHVDLLA >Mature_390_residues MINNSVLSGCTAQASTTSGQLSTQIKSHSCNHNDDPLEQHQADVLPFSLAFASIDTTDASQLSQIPPGLLAATSTGSAFS AQKNATTSFSAGHYGQQPPASLQTQSVANLTTGLTAAQDTSAQALPFLEGSPLAPKLSTAPPSSQYSSAQAVNLSIGSQG TGQAQTNSLSTSSYQQLSSQANSVTPQTSLPQQTGTLKSDTMMSQSLFQAMNSPLQASITDTASVDIVDSVNQILASSTR SQTAVAQWGPVAVSQTAPLLQQAHEMLSPLREQLKFQIDQQIKQAEIRLDPPELGKVELNVRLDGDRLHIQMHAANSSVR DALLMGLDRLRAELAMDHGGQIDVDISQDDRPQKQDTQASDFAIAAATNNGTETSFNSHSQQQDHVDLLA
Specific function: Unknown
COG id: COG3144
COG function: function code N; Flagellar hook-length control protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41166; Mature: 41166
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNSVLSGCTAQASTTSGQLSTQIKSHSCNHNDDPLEQHQADVLPFSLAFASIDTTDAS CCCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHEEECCCCCHH QLSQIPPGLLAATSTGSAFSAQKNATTSFSAGHYGQQPPASLQTQSVANLTTGLTAAQDT HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC SAQALPFLEGSPLAPKLSTAPPSSQYSSAQAVNLSIGSQGTGQAQTNSLSTSSYQQLSSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHH ANSVTPQTSLPQQTGTLKSDTMMSQSLFQAMNSPLQASITDTASVDIVDSVNQILASSTR HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCC SQTAVAQWGPVAVSQTAPLLQQAHEMLSPLREQLKFQIDQQIKQAEIRLDPPELGKVELN CCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEE VRLDGDRLHIQMHAANSSVRDALLMGLDRLRAELAMDHGGQIDVDISQDDRPQKQDTQAS EEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC DFAIAAATNNGTETSFNSHSQQQDHVDLLA CEEEEEECCCCCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure MINNSVLSGCTAQASTTSGQLSTQIKSHSCNHNDDPLEQHQADVLPFSLAFASIDTTDAS CCCCCHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHEEECCCCCHH QLSQIPPGLLAATSTGSAFSAQKNATTSFSAGHYGQQPPASLQTQSVANLTTGLTAAQDT HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC SAQALPFLEGSPLAPKLSTAPPSSQYSSAQAVNLSIGSQGTGQAQTNSLSTSSYQQLSSQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHH ANSVTPQTSLPQQTGTLKSDTMMSQSLFQAMNSPLQASITDTASVDIVDSVNQILASSTR HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHCCC SQTAVAQWGPVAVSQTAPLLQQAHEMLSPLREQLKFQIDQQIKQAEIRLDPPELGKVELN CCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEE VRLDGDRLHIQMHAANSSVRDALLMGLDRLRAELAMDHGGQIDVDISQDDRPQKQDTQAS EEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC DFAIAAATNNGTETSFNSHSQQQDHVDLLA CEEEEEECCCCCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA