| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is tag [H]
Identifier: 157959838
GI number: 157959838
Start: 10686
End: 11246
Strand: Direct
Name: tag [H]
Synonym: Spea_0008
Alternate gene names: 157959838
Gene position: 10686-11246 (Clockwise)
Preceding gene: 157959835
Following gene: 157959849
Centisome position: 0.21
GC content: 41.0
Gene sequence:
>561_bases ATGGAAGTAACGCGTTGTGGCTGGGTTAGTAACGATCCCATTTATCAAGAGTACCATGACAGGGTGTGGGGAAGGCCTGT TTATGATAGCCAAGAGTTATTTGCGAAGCTTTGTCTCGACGGTCAGCAGGCGGGTTTATCTTGGATTACCATACTAAAGA AACAGCAAAATTATGAGGCTGCATTTGCTAATTTTGATCCTAAAGTTATCGCAACTTTTGATGATGCAAAAATAGAGGAA TTACTGCAAAACCCTGGCATTGTACGTAATAGGCTTAAGGTTAATTCGATCATAAAAAATGCTAAAGGCTATATGGCTTA TGTCGAGCAGGGTAATGATTTTTCAGCGTTTTTGTGGAGCTTTGTAGGGGGCGCGCCAAAGACTAATCATTTTATATCAA TGAATGAATTACCTGTACAGACCCCAGAGTCAGAAGCCATGTCTAAGGCCTTAAAGAAGATGGGTTTTAACTTCGTCGGC CCCACTATTTGTTATGCCTTTATGCAAGCCGTTGGCATGGTAAATGACCACACCACGGACTGTTTTTGTTATCAAAAATA A
Upstream 100 bases:
>100_bases CTGGAAGCTCTAATAGAAAATGGGATCAATTATACCTTGTAGAATAACGCTTATGTAGGTTATTTTTTATCTGGTTGGTT AAAAACTCAGGAATTGGACT
Downstream 100 bases:
>100_bases CCCATATAGCCTAAGGATTTAAGGCTGAGTCATTACAAGTTTTGATGGGTCTTCAGAATGTAAATAGATGGCTTTAAATT CCACTTCGCCAGTAGAGTTA
Product: DNA-3-methyladenine glycosylase I
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MEVTRCGWVSNDPIYQEYHDRVWGRPVYDSQELFAKLCLDGQQAGLSWITILKKQQNYEAAFANFDPKVIATFDDAKIEE LLQNPGIVRNRLKVNSIIKNAKGYMAYVEQGNDFSAFLWSFVGGAPKTNHFISMNELPVQTPESEAMSKALKKMGFNFVG PTICYAFMQAVGMVNDHTTDCFCYQK
Sequences:
>Translated_186_residues MEVTRCGWVSNDPIYQEYHDRVWGRPVYDSQELFAKLCLDGQQAGLSWITILKKQQNYEAAFANFDPKVIATFDDAKIEE LLQNPGIVRNRLKVNSIIKNAKGYMAYVEQGNDFSAFLWSFVGGAPKTNHFISMNELPVQTPESEAMSKALKKMGFNFVG PTICYAFMQAVGMVNDHTTDCFCYQK >Mature_186_residues MEVTRCGWVSNDPIYQEYHDRVWGRPVYDSQELFAKLCLDGQQAGLSWITILKKQQNYEAAFANFDPKVIATFDDAKIEE LLQNPGIVRNRLKVNSIIKNAKGYMAYVEQGNDFSAFLWSFVGGAPKTNHFISMNELPVQTPESEAMSKALKKMGFNFVG PTICYAFMQAVGMVNDHTTDCFCYQK
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=180, Percent_Identity=52.7777777777778, Blast_Score=217, Evalue=4e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 21133; Mature: 21133
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVTRCGWVSNDPIYQEYHDRVWGRPVYDSQELFAKLCLDGQQAGLSWITILKKQQNYEA CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHH AFANFDPKVIATFDDAKIEELLQNPGIVRNRLKVNSIIKNAKGYMAYVEQGNDFSAFLWS HHCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH FVGGAPKTNHFISMNELPVQTPESEAMSKALKKMGFNFVGPTICYAFMQAVGMVNDHTTD HHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC CFCYQK EEEECC >Mature Secondary Structure MEVTRCGWVSNDPIYQEYHDRVWGRPVYDSQELFAKLCLDGQQAGLSWITILKKQQNYEA CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHH AFANFDPKVIATFDDAKIEELLQNPGIVRNRLKVNSIIKNAKGYMAYVEQGNDFSAFLWS HHCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH FVGGAPKTNHFISMNELPVQTPESEAMSKALKKMGFNFVGPTICYAFMQAVGMVNDHTTD HHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC CFCYQK EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3536912; 3520491; 8041620; 9278503 [H]