Definition Halobacterium sp. NRC-1 chromosome, complete genome.
Accession NC_002607
Length 2,014,239

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The map label for this gene is polA2

Identifier: 15791139

GI number:

Start: 1746166

End: 1750278

Strand: Reverse

Name: polA2

Synonym: VNG2338G

Alternate gene names: NA

Gene position: NA

Preceding gene: 15791140

Following gene: 15791136

Centisome position: NA

GC content: NA

Gene sequence:

>4113_bases
ATGCGGCCCACCGACGAAACCTACTTCGAAACGCTGGAAACCGGCCTCGACGACGCCTTCGAGGTCGCGGAAGCCGCCCG
GGAACGCGGGGAAGACCCGACGCCGAACGTCGAAATCCCGGTCGCAAAGGACATGGCCGACCGCGTCGAGAACATCCTCG
GGATCGACGGCGTCGCCGAGCGCGTCCGCGATCTCGACGGCGAGATGAGCCGCGAGGAGGCCGCGCTGGAGCTCGTCGCG
GACTTCGTCGACGGCCGCGTCGGCGACTACGACACCGACGCCGGCAAGATCGAGGGCGCGGTCCGCACCGCGGTTGCACT
GCTCACTGAGGGCGTGGTCGCGGCCCCCATCGAGGGCATCGACCGCGTTGAAGTCAACGACAACGACGACGGCACCCAGT
ACGTCGCGGTCTACTACGCCGGCCCCATCCGGTCGGCCGGCGGCACCGCGCAGGCGCTCTCGGTGCTCGTCGCCGACTAC
GCGCGTGCGATGCTCGGCATCGACGCGTTCAAACCCCGCGACGACGAGATCGAGCGCTACGCCGAGGAGGTCGATCTCTA
CGACTCCGAGACCGGTCTCCAGTACTCCCCGAAGGACGCCGAAACCACGTTCATCACCGAACACTGTCCGGTGATGCTGG
ACGGCGAAGCAACCGGCAACGAGGAGGTCGATGGGTTCCGCGACCTCGAACGCATCGACACCAACTCCCCGCGGGGCGGC
ATGTGTCTCGTGCTCGCGGAGGGCATCGCGCTGAAAGCCCCCAAGATCCAGCGCTACACCCGGAACCTCGACGAAGTCGC
GTGGCCGTGGCTCCAGGACCTCATCGACGGCACCATCGGCGCCGACGACGCCGACGAAGACACCCCGGACGCCGGCAGCG
ACAGCGACGCAACCGACGAGGGGGACGCCCCCAGTGCGAGCACCGACGCCGAGGAGCCACCCCGCGCCGCCCCCTCGGAC
AAGTTCCTCCGCGACCTCATCGCGGGCCGGCCGGTGTTCGGCCATCCCTCCAAAAACGGCGGGTTCAGGCTGCGCTACGG
GCGTGCGCGAAACCACGGGAACGCGACCGCGGGCGTCCACCCGGCGACGATGCACTTGCTCGATGACTTCCTCGCGACGG
GCACCCAGATCAAGACCGAACGCCCCGGGAAGGCCGCGGGCATCGTCCCCGTCGACTCCATCGAGGGGCCGACGGTGAAA
CTCGCCAACGGCGACGTCCGCCACATCAACGACCCCGCGGACGCCCTCGACGTCCGCAACGGCGTCGCGGAGATCCTCGA
CGTCGGCGAATACCTCGTGAACTACGGGGAGTTCGTGGAGAACAACCACGAGCTCGCGCCCGCCTCGTACGCCCCCGAGT
GGTGGATTCAGGACCTCGACGCCGCGGGCGCGGACGTGCAAGCCCTCCGGGACTCGCCGTACGTCGATCTCACCGCCCCC
ACCGCCGATCAAGCCATGGCGTGGGCGACCGACTACGACGCCCCGCTGCACCCGGCGTACACGTACCTCTGGCACGACAT
CGACGTCGAGCAGTTCCGCGCGCTCGCCGACGCCGTCGCCGACGCCCACACCGACGCCAGCGACGACGACGACCGCGGTG
TGCTCGTGCTCGATCACACCACCACCGTGCGCGAGACGCTCGAAGCGCTCCTGGTCACCCACCACCAGGGCGACGACACC
ATCCGGGTCGACGACTGGCTGCCGCTGGCGCGCTCGCTCGGCGTCACCGAATCGCTCGACCGGGAGTGGGAGACGCTCTC
TGAGGCCGCCGCCGAGTGGCCCAACGCCGTCCGCGCGGTCAACGAAGTCGCGCCGTTCAGCGTCCAGGAGCGCGCCCCCA
CACGCATCGGGAACCGCATGGGCCGCCCCGAGAAATCCGAATCCCGCGATCTCTCGCCGGCCGTCCACACCCTGTTCCCC
ATCGGCGACGCCGGCGGCAGCCAGCGCGACGTCGCCGACGCCGCGCGGTACGCGCCGGACATGTCCGACACGCCCGGCGA
AATCCCCGTCCGGGTCGGCGACCGCGTCTGTCCGTCCTGCGACGAGCACACCTACGAATCGCGGTGCCCCGACTGCGGGG
ACTGGACCGACCCCCACTACGAGTGCCGGGACTGCGGTGCCGTCGCCACCCCCGACGAGTCCGGGCGCGTCGAATGCCCG
AACTGCGGGCGGGACCTCGACAACGTCACCACACAGGTCATCGACATCAACGACGAATACCACGGCGCGCTCCGCGCCGT
CGGCGAGCGCGAGAACGCCTTCGACCAACTCAAAGGCGTCAAGGGACTGTTATCCGCGGAGAAAACCCCCGAACCCATGG
CGAAAGGCGTCCTGCGCGCGAAACACGACGTCACCGCGTTCAAGGACGGCACTGTCCGCTACGACATGACCGACCTCCCG
GTGACCGCCGTCACACCCGCGGAGCTCGACGTCACTGCCGGGCAGTTCCGCGAACTCGGCTACAACCAGGACATCCACGG
CGACCCCCTCGAACACGACGACCAACTGGTCGAACTCCGCGTGCAGGACGTGGTGCTCTCCGACGGCGCGGCCGACCACA
TGCTCAAGACCGCGGACTTCGTCGACGACCTCCTCACCCAGTATTACGGCCTCGACGCCTTCTACGACCTCGACGACCGC
GACGATCTCGTCGGCGAACTCGTCTTCGGCATGGCACCCCACACGTCGGCCGCCGTCGTCGGCCGCGTTGCCGGCTTCAC
CTCCGCGTCCGTCGGCTACGCCCACCCCTACTTCCACGCCGCGAAACGCCGGAACTGCTTCCACCCGGAGACGAACGTCT
GGTTCCGCGACGAGTCCGGGGAGTGGCACCACGACCCGATCGAGACGCTCGTCGAGGCGCGACTCGATCCCGACACGGCC
GACGAGGACGACTTCGGAGCCCTCGTGCAGGCCCTCGACGGCGACGTGTTCGTGCCCTCGGTGACCGAGGACGGCGAGGA
GACCCTCCAGCGAGTCGAAGCCGTCTCCAAACACCCCGCCCCGGACCACCTCCTCGCGGTCGAGACGAAACGCGGCCGGG
AACTGACCGTGACCCCCGACCACTCGATGCGTCGGTGGACCGGGGACGGCATCGAACGCGTCGACGCCCGGGAACTGACG
GCGGGCGACGCTCTCCCCGCACCGACACAGGTTCCGGGCGACGGCGAGACGGCGACGTCCGAGCTGCGTTCCGAGTCCCT
GGACGGCACACACCCGCAGCGACGCTTCGGTGACGGCGGCAGCGTCCGGACCGACGAGGTCGTGTCCGTCGAACCGGTCC
GATCCAGCGTCGACCACACGTACTCCCTGACCGTCGCGGAGACCAACACGCTCGTCGCAAACGGCCTGTTCACCGGGCAG
TGCGACGGCGACGAGGACTGCGTGATGCTGCTGATGGACGGCCTGATCAACTTCTCGAAGTCGTACCTGCCGGACAAGCG
CGGCGGCCGGATGGACGCGCCGCTGGTGATGTCCTCCCGCATCGACCCCGCGGAGATCGACGACGAAGCCCACAACATCG
ACATCGACCGCGAGTACCCCCGGGAGTTCTACGAGGCGACCCGGGAGCTGGCCGACCCCGAGGACGTGGCGGACCTCATC
ACCCTCGCGGAGTCGACGGTCGGCACCGACGAAGAGTACACCGGCTTCGGGCACACCCACGCCACCTCCAACATCCACCT
GGGGCCGTCGCTGTCGGCGTACAAGACCCTGGGGTCGATGATGGACAAGATGGACGCCCAACTGGAGTTGGCCCGCAAAC
TCCGGTCGGTCGCCGAAACCGACGTCGCCGAACGCGTCATCGAGTACCACTTCCTCCCGGACCTCATCGGGAACCTGCGC
GCGTTCAGCCGCCAGGAAACCCGGTGTCTGGACTGTGGGGAGAAATACCGCCGCATGCCGCTCAGCGGCGACTGCCGGGA
GTGCGGTGGGCGCGTGAACCTCACGGTCCACGAGGGTTCCGTAAACAAGTACATGGACACCGCCATGCGGGTCGCCACCG
AGTACGACTGCCGGGAGTACACGAAACAGCGCCTCGAAATCATGGACCGACGCCTGGAATCCGTCTTCGAGGACGACACC
AACAAGCAAAGCGGCATCTCCGATTTCATGTGA

Upstream 100 bases:

>100_bases
AACGCGCGACCGTGTTCGCCGGCGAACTGTACGTCCGCGAACTCGACGCCGACCTCGTTCGCGAGCACGACGCCGCCACC
GACCTCGACCGCTGGCTGTA

Downstream 100 bases:

>100_bases
CCACGGCGCTCGCCGCGCGCGGCGCGCTCAGAACGGGGCCTGTGGGCCTTCGTCCTCGGCGCTCTCCTCGGTGTCGCCGT
CCTCGCCCGGGAACGACGGC

Product: DNA polymerase II large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1370_residues
MRPTDETYFETLETGLDDAFEVAEAARERGEDPTPNVEIPVAKDMADRVENILGIDGVAERVRDLDGEMSREEAALELVA
DFVDGRVGDYDTDAGKIEGAVRTAVALLTEGVVAAPIEGIDRVEVNDNDDGTQYVAVYYAGPIRSAGGTAQALSVLVADY
ARAMLGIDAFKPRDDEIERYAEEVDLYDSETGLQYSPKDAETTFITEHCPVMLDGEATGNEEVDGFRDLERIDTNSPRGG
MCLVLAEGIALKAPKIQRYTRNLDEVAWPWLQDLIDGTIGADDADEDTPDAGSDSDATDEGDAPSASTDAEEPPRAAPSD
KFLRDLIAGRPVFGHPSKNGGFRLRYGRARNHGNATAGVHPATMHLLDDFLATGTQIKTERPGKAAGIVPVDSIEGPTVK
LANGDVRHINDPADALDVRNGVAEILDVGEYLVNYGEFVENNHELAPASYAPEWWIQDLDAAGADVQALRDSPYVDLTAP
TADQAMAWATDYDAPLHPAYTYLWHDIDVEQFRALADAVADAHTDASDDDDRGVLVLDHTTTVRETLEALLVTHHQGDDT
IRVDDWLPLARSLGVTESLDREWETLSEAAAEWPNAVRAVNEVAPFSVQERAPTRIGNRMGRPEKSESRDLSPAVHTLFP
IGDAGGSQRDVADAARYAPDMSDTPGEIPVRVGDRVCPSCDEHTYESRCPDCGDWTDPHYECRDCGAVATPDESGRVECP
NCGRDLDNVTTQVIDINDEYHGALRAVGERENAFDQLKGVKGLLSAEKTPEPMAKGVLRAKHDVTAFKDGTVRYDMTDLP
VTAVTPAELDVTAGQFRELGYNQDIHGDPLEHDDQLVELRVQDVVLSDGAADHMLKTADFVDDLLTQYYGLDAFYDLDDR
DDLVGELVFGMAPHTSAAVVGRVAGFTSASVGYAHPYFHAAKRRNCFHPETNVWFRDESGEWHHDPIETLVEARLDPDTA
DEDDFGALVQALDGDVFVPSVTEDGEETLQRVEAVSKHPAPDHLLAVETKRGRELTVTPDHSMRRWTGDGIERVDARELT
AGDALPAPTQVPGDGETATSELRSESLDGTHPQRRFGDGGSVRTDEVVSVEPVRSSVDHTYSLTVAETNTLVANGLFTGQ
CDGDEDCVMLLMDGLINFSKSYLPDKRGGRMDAPLVMSSRIDPAEIDDEAHNIDIDREYPREFYEATRELADPEDVADLI
TLAESTVGTDEEYTGFGHTHATSNIHLGPSLSAYKTLGSMMDKMDAQLELARKLRSVAETDVAERVIEYHFLPDLIGNLR
AFSRQETRCLDCGEKYRRMPLSGDCRECGGRVNLTVHEGSVNKYMDTAMRVATEYDCREYTKQRLEIMDRRLESVFEDDT
NKQSGISDFM

Sequences:
NA

Specific function: NA

COG id: COG1933

COG function: function code L; Archaeal DNA polymerase II, large subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA