Definition Halobacterium sp. NRC-1 chromosome, complete genome.
Accession NC_002607
Length 2,014,239

Click here to switch to the map view.

The map label for this gene is phr1

Identifier: 15790677

GI number:

Start: 1293457

End: 1294845

Strand: Reverse

Name: phr1

Synonym: VNG1754G

Alternate gene names: NA

Gene position: NA

Preceding gene: 15790678

Following gene: 15790676

Centisome position: NA

GC content: NA

Gene sequence:

>1389_bases
ATGCACCTGTACTGGCACCAACGCGACCTCCGCGTTCCCGACAACCGCGGCCTCCACGCCGCCACCGACGGCGACACCGT
CGTGCCCGTCTACGTCTTCGACGACACCGTGCTCTCCCAGGTGGGCCGCCCCAAGCGCGCGTTCCTCGCCGCCGGCGTGC
GCGCACTGCGGGCGGCGTACCGCGAGCGCGGCAGCGACCTCCTCGTCCGTGAGGGCGACGCCGAATCCGTGCTGCCGGCG
CTGGCCGACGAGTTCGACGCCGACACCGTGTTCCACGCCGCCCACTACGACGCCGCACGGCGGAACCGCCGCACGCGGGT
CGCGGACGCGCTCGCCGCCGCAGGCGTCGACACCGCGGGCCACGTCGACCACACGCTCGTCGACCCCGCGACCCTCGACG
ACGCCTACCCCTCTCACAGCCAGTTCTACGACGACTGGCAGCAGGCACCGAAACCCGACCCGGTGCCCGCGCCGGACGCC
GACGCGCTGGCCGACGTCCACGACGACCACACGCTCTCGGTCCCGGCCCCCGAGCCGCCGCTCCCGGATGCGGGGCACGC
GGCCGCCACCGACCGCCTCGCGGCGTTCCTCGACGACGGCATCGCGTCGTACAACGACACCCGGGACGACCTCGCGGCGG
CGGTCGACGCCCCCGCCAGCGCTGTCTCCCGGCTGTCGCCGTATCTCGCCGCCGGCAACATCGGCGTCCGGGAGGTGTGG
GCGGCCGTCGCCGACGCCTACGACGACGCCACCGGGAATGCGGCGCGGAACATCGGGAAATACCGCTACGAGCTGTCCTG
GCGCGAGCAGAACTACCACCTGCTGTACCACACCCCCCGCCTCCAGACGGAGAACTACGTCAGCTTCGACGCCCCGATCG
CGTGGCAGAACAGCGACGACCACTTCGAGGCGTGGACCCGGGGGGAGACCGGCTACCCGCTGGTGGACGCCGGCATGCGC
CAGCTCCGCGCGGAGGGGTACGTCCACAACCGCCCCCGGCAGGTGGTCGCCAGCTTCCTCACGAAACACCTCCTGGTGGA
CTGGCGGCGCGGCGAGCGCCACTTCGCCGACCGGCTGGTGGATTACGACCCCGCGAACAACGCCGCGAACTGGCAGTGGA
CCGCCTCCACCGGCACGGACACGGTCGCCGTCCGCATCTTCGATCCGGTCAGCCAGATGGCGAAATACGATTCCGATGCG
GCGTTCGTCACCGAGTACGTCCCCGAGCTGCGCGGCGTCGACCCCGAGACCATCGTGGACTGGCCGACGCTGCGCCACTC
CCAGCGCGAACGCCTCGCGCCCGACTACCACCACCCGATCGTCGACCGCGATCACGCCTACGAGCGCGCCCAGCGCGTCT
TCGAAGCGGCCCTGGACGGGGACGCGTGA

Upstream 100 bases:

>100_bases
AAGCCGTTATCGACGACGATCCCGCGGCGTCGGGCTCGACCGACCCGCTGGCCGTCCCCGGGGAGTTCAACTTCGACACG
CCGACCACGGCCGACTGACC

Downstream 100 bases:

>100_bases
TCCGGGCCGCGGCCACACGCTGATTCCGCGGCGGTTTTACCGCGTGTCCCCGTAGCGCCAGCCATGTACGACCGGATCCT
GCTCCCGGTGGACGACAGTG

Product: photolyase/cryptochrome

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>462_residues
MHLYWHQRDLRVPDNRGLHAATDGDTVVPVYVFDDTVLSQVGRPKRAFLAAGVRALRAAYRERGSDLLVREGDAESVLPA
LADEFDADTVFHAAHYDAARRNRRTRVADALAAAGVDTAGHVDHTLVDPATLDDAYPSHSQFYDDWQQAPKPDPVPAPDA
DALADVHDDHTLSVPAPEPPLPDAGHAAATDRLAAFLDDGIASYNDTRDDLAAAVDAPASAVSRLSPYLAAGNIGVREVW
AAVADAYDDATGNAARNIGKYRYELSWREQNYHLLYHTPRLQTENYVSFDAPIAWQNSDDHFEAWTRGETGYPLVDAGMR
QLRAEGYVHNRPRQVVASFLTKHLLVDWRRGERHFADRLVDYDPANNAANWQWTASTGTDTVAVRIFDPVSQMAKYDSDA
AFVTEYVPELRGVDPETIVDWPTLRHSQRERLAPDYHHPIVDRDHAYERAQRVFEAALDGDA

Sequences:
NA

Specific function: NA

COG id: COG0415

COG function: function code L; Deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA