Definition Halobacterium sp. NRC-1 chromosome, complete genome.
Accession NC_002607
Length 2,014,239

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The map label for this gene is gspE3

Identifier: 15790072

GI number:

Start: 723798

End: 725687

Strand: Reverse

Name: gspE3

Synonym: VNG0949G

Alternate gene names: NA

Gene position: NA

Preceding gene: 16554479

Following gene: 15790071

Centisome position: NA

GC content: NA

Gene sequence:

>1890_bases
ATGGCAGACCATGGGAGTCGACAGATCGGTCACGAACTCCGGGAGACGGCGACCCGCTACACGCACCTCCAGGAGTATCT
CCAGCGGTTCAAACAGTTCACCGGCGAGTTCCCGGAGCTGATCGACGAACCGACCGACGACTGGGAGGCCGACAAGCCGA
ACGTCGTCTACCCCGTGGGCGGCCCCATCTTCTGTCACGTGTACGGTGACCTGGGAAAAGACACCAAATACTACACCATC
GAGCCGGAGCTGTCGGGGCCCGAAGCGGCGGTGTTCAAGAACGTCCAGGAGCGCATCCTTGAGAAGTCGGTCAACAAACC
CGCACCGGAGGCCGAGGCCGAGTACGACGACCGCATCGAAGAGCTGCTAGAGGAGACCGTTCGCATCTCCGACGACAAGT
CCGACGACGTGTTCCACAGGGTGCGCCAGCTCCCGAACAACCTGGGATCGCTGGTGAAGAACTTCGACGCGTCGACGGTG
GCGGATCGGATGGTCGGCGACGATCGTGGCCAGATGTCCCTGGACTCCGGTGACTTGTCCGCCCAGCAGATGCGTGCGGG
AGCGCGCCGGGTCGCGTCGTCGCCTCGGAACGCGATCAACCGCGTTCAGCGCGCGGTCCCGATGGTCCGGGAGGCGCTTG
AGGAAGCGTTCGGGTTCGGTCGCATTCCAGTCTCGGAGACGACCTACGAGAACATCCGGTACCAGTTGAACCGCGACATC
GTCGGGTTCGGACCGCTGGAGCCGGTGATGCGTGACCCCTACAACGAGGACATTCACGTCATCGGCCCGACCGGCTGTTA
CGTCGACCACGGCACCTACGGGATGCTGGAGACGACCGTTGACTTCGGGACGCCCGACGAGTTCGACGGCTGGCTGCGGA
ACATGGGCGAGCGGATGGGCGACCCGGTCTCCGACAGCGACCCCATCGTGGACTCGACGCTGCCCGACGGCTCCCGTATC
AACATCATTTACAGCGACGACGTCTCCCTGAAGGGGCCGTCGCTCACCATCCGACAGGGCGACGACGTGCCGCTGTCGGT
CGGGCAGATCACCAAGTGGGGGACGCTGTCGCCGGAGCTCGCGGCGTACCTCTGGCTGTGCCTGGAGAACGAACAGACGG
TGTTCGTCGTCGGGGAGACGGCGTCGGGGAAAACCACGACGCTGAACTCCATCATGTCGTTTATTCCCCGGGATTCGAAG
ATCTACACCGCGGAGGACACCGCCGAGGTCATTCCGCCACACGACACCTGGCAGCAGCTGCTCACCCGTGAGGGGCAGGG
CGAGAACTCCGCGGACGTGGACATGTTCGATCTGGTCGCGGCGGCGCTGCGGTCGCGCCCGGATTACATCATCGTCGGCG
AGGTGCGTGGGGAGGAGGGGCGGATGGCGTTCCAGGCGGCCCAGACCGGCCACCCGGTCATGCTGACGTTCCACGCAAGC
GACATCGTCTCGATGATTCAGCGGTTCACCGGGGAGCCGATCAACGTCCCGGAGACGTTCATGGACAACGCCGACGTGGC
GCTGTTCCAGAACCGCGTGAAGCAGGGCGACGACGTGTTGCGACGCGTCACCTCGGTCCAGGAGATCGAGGGGTATTCCA
AGGAGATGGGCGGGGTTGTCACCCGGCAGGCGTTCTACTGGGATCCGGTCGAGGACGAGATCGTCTTCCAGGGCCGGAAC
AACTCCTTCGTGCTCGAAGAACAGATCGCGACGCTGCTGGGGTACGCCGACACGCGGGAGATCTACGACGAGATGGATTT
CCGCGCTGAGATCCTCGAGCGCATCATCCAGGAGGACCTCATCGGCTACCACGATTTCAACGACACGATTGCGGCCTTCC
AGCGTGACGGCGTCGAGGGACTGCCGTTCACGATCTCACGCGGGTTCTGA

Upstream 100 bases:

>100_bases
CGGGGATGGGCGAACAGGTCGGCGACTCCATCGGATACTCGGTGCGGTCCGGCACTGGAATCGTCATCGAAAGCCGCAGT
GTGGCATAACAGGAATACAC

Downstream 100 bases:

>100_bases
GTCAGCATGGCAGCCGAAGCCGAGGGCGAACACGTCGAGAGCGAGGGGTCACTGAGCGACGTCGACTTCGGGGAGTTCGT
GGAGTCGGTCGTGGAGTCCT

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>629_residues
MADHGSRQIGHELRETATRYTHLQEYLQRFKQFTGEFPELIDEPTDDWEADKPNVVYPVGGPIFCHVYGDLGKDTKYYTI
EPELSGPEAAVFKNVQERILEKSVNKPAPEAEAEYDDRIEELLEETVRISDDKSDDVFHRVRQLPNNLGSLVKNFDASTV
ADRMVGDDRGQMSLDSGDLSAQQMRAGARRVASSPRNAINRVQRAVPMVREALEEAFGFGRIPVSETTYENIRYQLNRDI
VGFGPLEPVMRDPYNEDIHVIGPTGCYVDHGTYGMLETTVDFGTPDEFDGWLRNMGERMGDPVSDSDPIVDSTLPDGSRI
NIIYSDDVSLKGPSLTIRQGDDVPLSVGQITKWGTLSPELAAYLWLCLENEQTVFVVGETASGKTTTLNSIMSFIPRDSK
IYTAEDTAEVIPPHDTWQQLLTREGQGENSADVDMFDLVAAALRSRPDYIIVGEVRGEEGRMAFQAAQTGHPVMLTFHAS
DIVSMIQRFTGEPINVPETFMDNADVALFQNRVKQGDDVLRRVTSVQEIEGYSKEMGGVVTRQAFYWDPVEDEIVFQGRN
NSFVLEEQIATLLGYADTREIYDEMDFRAEILERIIQEDLIGYHDFNDTIAAFQRDGVEGLPFTISRGF

Sequences:
NA

Specific function: NA

COG id: COG0630

COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA