| Definition | Halobacterium sp. NRC-1 chromosome, complete genome. |
|---|---|
| Accession | NC_002607 |
| Length | 2,014,239 |
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The map label for this gene is gspE3
Identifier: 15790072
GI number:
Start: 723798
End: 725687
Strand: Reverse
Name: gspE3
Synonym: VNG0949G
Alternate gene names: NA
Gene position: NA
Preceding gene: 16554479
Following gene: 15790071
Centisome position: NA
GC content: NA
Gene sequence:
>1890_bases ATGGCAGACCATGGGAGTCGACAGATCGGTCACGAACTCCGGGAGACGGCGACCCGCTACACGCACCTCCAGGAGTATCT CCAGCGGTTCAAACAGTTCACCGGCGAGTTCCCGGAGCTGATCGACGAACCGACCGACGACTGGGAGGCCGACAAGCCGA ACGTCGTCTACCCCGTGGGCGGCCCCATCTTCTGTCACGTGTACGGTGACCTGGGAAAAGACACCAAATACTACACCATC GAGCCGGAGCTGTCGGGGCCCGAAGCGGCGGTGTTCAAGAACGTCCAGGAGCGCATCCTTGAGAAGTCGGTCAACAAACC CGCACCGGAGGCCGAGGCCGAGTACGACGACCGCATCGAAGAGCTGCTAGAGGAGACCGTTCGCATCTCCGACGACAAGT CCGACGACGTGTTCCACAGGGTGCGCCAGCTCCCGAACAACCTGGGATCGCTGGTGAAGAACTTCGACGCGTCGACGGTG GCGGATCGGATGGTCGGCGACGATCGTGGCCAGATGTCCCTGGACTCCGGTGACTTGTCCGCCCAGCAGATGCGTGCGGG AGCGCGCCGGGTCGCGTCGTCGCCTCGGAACGCGATCAACCGCGTTCAGCGCGCGGTCCCGATGGTCCGGGAGGCGCTTG AGGAAGCGTTCGGGTTCGGTCGCATTCCAGTCTCGGAGACGACCTACGAGAACATCCGGTACCAGTTGAACCGCGACATC GTCGGGTTCGGACCGCTGGAGCCGGTGATGCGTGACCCCTACAACGAGGACATTCACGTCATCGGCCCGACCGGCTGTTA CGTCGACCACGGCACCTACGGGATGCTGGAGACGACCGTTGACTTCGGGACGCCCGACGAGTTCGACGGCTGGCTGCGGA ACATGGGCGAGCGGATGGGCGACCCGGTCTCCGACAGCGACCCCATCGTGGACTCGACGCTGCCCGACGGCTCCCGTATC AACATCATTTACAGCGACGACGTCTCCCTGAAGGGGCCGTCGCTCACCATCCGACAGGGCGACGACGTGCCGCTGTCGGT CGGGCAGATCACCAAGTGGGGGACGCTGTCGCCGGAGCTCGCGGCGTACCTCTGGCTGTGCCTGGAGAACGAACAGACGG TGTTCGTCGTCGGGGAGACGGCGTCGGGGAAAACCACGACGCTGAACTCCATCATGTCGTTTATTCCCCGGGATTCGAAG ATCTACACCGCGGAGGACACCGCCGAGGTCATTCCGCCACACGACACCTGGCAGCAGCTGCTCACCCGTGAGGGGCAGGG CGAGAACTCCGCGGACGTGGACATGTTCGATCTGGTCGCGGCGGCGCTGCGGTCGCGCCCGGATTACATCATCGTCGGCG AGGTGCGTGGGGAGGAGGGGCGGATGGCGTTCCAGGCGGCCCAGACCGGCCACCCGGTCATGCTGACGTTCCACGCAAGC GACATCGTCTCGATGATTCAGCGGTTCACCGGGGAGCCGATCAACGTCCCGGAGACGTTCATGGACAACGCCGACGTGGC GCTGTTCCAGAACCGCGTGAAGCAGGGCGACGACGTGTTGCGACGCGTCACCTCGGTCCAGGAGATCGAGGGGTATTCCA AGGAGATGGGCGGGGTTGTCACCCGGCAGGCGTTCTACTGGGATCCGGTCGAGGACGAGATCGTCTTCCAGGGCCGGAAC AACTCCTTCGTGCTCGAAGAACAGATCGCGACGCTGCTGGGGTACGCCGACACGCGGGAGATCTACGACGAGATGGATTT CCGCGCTGAGATCCTCGAGCGCATCATCCAGGAGGACCTCATCGGCTACCACGATTTCAACGACACGATTGCGGCCTTCC AGCGTGACGGCGTCGAGGGACTGCCGTTCACGATCTCACGCGGGTTCTGA
Upstream 100 bases:
>100_bases CGGGGATGGGCGAACAGGTCGGCGACTCCATCGGATACTCGGTGCGGTCCGGCACTGGAATCGTCATCGAAAGCCGCAGT GTGGCATAACAGGAATACAC
Downstream 100 bases:
>100_bases GTCAGCATGGCAGCCGAAGCCGAGGGCGAACACGTCGAGAGCGAGGGGTCACTGAGCGACGTCGACTTCGGGGAGTTCGT GGAGTCGGTCGTGGAGTCCT
Product: type II secretion system protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>629_residues MADHGSRQIGHELRETATRYTHLQEYLQRFKQFTGEFPELIDEPTDDWEADKPNVVYPVGGPIFCHVYGDLGKDTKYYTI EPELSGPEAAVFKNVQERILEKSVNKPAPEAEAEYDDRIEELLEETVRISDDKSDDVFHRVRQLPNNLGSLVKNFDASTV ADRMVGDDRGQMSLDSGDLSAQQMRAGARRVASSPRNAINRVQRAVPMVREALEEAFGFGRIPVSETTYENIRYQLNRDI VGFGPLEPVMRDPYNEDIHVIGPTGCYVDHGTYGMLETTVDFGTPDEFDGWLRNMGERMGDPVSDSDPIVDSTLPDGSRI NIIYSDDVSLKGPSLTIRQGDDVPLSVGQITKWGTLSPELAAYLWLCLENEQTVFVVGETASGKTTTLNSIMSFIPRDSK IYTAEDTAEVIPPHDTWQQLLTREGQGENSADVDMFDLVAAALRSRPDYIIVGEVRGEEGRMAFQAAQTGHPVMLTFHAS DIVSMIQRFTGEPINVPETFMDNADVALFQNRVKQGDDVLRRVTSVQEIEGYSKEMGGVVTRQAFYWDPVEDEIVFQGRN NSFVLEEQIATLLGYADTREIYDEMDFRAEILERIIQEDLIGYHDFNDTIAAFQRDGVEGLPFTISRGF
Sequences:
NA
Specific function: NA
COG id: COG0630
COG function: function code NU; Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA