Definition Halobacterium sp. NRC-1 chromosome, complete genome.
Accession NC_002607
Length 2,014,239

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The map label for this gene is epf2

Identifier: 15789650

GI number:

Start: 307290

End: 309215

Strand: Reverse

Name: epf2

Synonym: VNG0401G

Alternate gene names: NA

Gene position: NA

Preceding gene: 15789651

Following gene: 15789649

Centisome position: NA

GC content: NA

Gene sequence:

>1926_bases
ATGAGTACTGTAGACCGTCAACTTGAGGAGTTACAGGACGAAATCGTCAGCGAAATTCCGGCGGACATCTCGGTCACCGA
TGTCAAATACGAAGGCCCCGAGCTCGTCGTCTACACCCGGGACCCCAAACAGTTCGCACAGGACGGCGACCTCGTTCGCC
GGCTGGCGTCCAAGCTCCGGAAGCGCATCACCGTGCGGCCGGACCCGGCGGTACTCTCCAGCCCGAAGCGCGCCCGCGAC
CGCGTCCTCGACGTGATCCCCGAGGAGGCCGGCGTCACGAACCTGGATTTCCACGAGGACACCGGCGAGGTGGTCATCGA
AGCCGAGAAGCCCGGCATGGTGATCGGCCGCCACGGCTCCACGTTGCGGGAGATCACACAGGAAGCCGGGTGGACTCCGG
AGGTCGTGCGCACGCCCCCGATCGAGTCCTCGACGGTCTCGAACGTCCGGAACTTCCTCAAACAGGAGCGCGACGAGCGC
CGCGACATCCTCGAAACGGTCGGACGCCAGATCCACCGTGAGGAGATGCAGGACGACGAGTACGTGCGCGTGACGACCCT
GGGGTGCTGTCGCGAGGTCGGGCGCGCCAGCTTCGTGCTTTCGACGCCGGAAACGCGGATTCTCGTCGACTGCGGGGACA
AACCCGGCAGCGAGGACGAAGTCCCGTATCTGCAGGTCCAGGAGGCGCTGGCGGGCGGCGCGAACACGATCGACGCCGTG
ATTTTGACCCACGCCCACCTCGACCACTCGGCGTTCATTCCGCTGCTGTTCAAGTACGGCTACGACGGCCCGATCTACTG
CACGGAGCCGACCCGGGACCTCATGGGTCTGTTGACCCTGGACTACTTGGACGTGGCCGCGAAGGAGGGGCGGGCACCGC
CGTACGACTCCGAGATGGTGCGGGAAGCGATCAAGCACTGCATCCCCCTGGAGTACGGCGATGTCACTGACATCGCGCCG
GACGTGAAACTCACGTTCCACAACGCCGGTCACATCCTCGGGTCGGCCGTCTCCCATTTCCACATCGGGGACGGCCTCTA
CAACGTCGCGTTCTCCGGGGACATTCACTACGACGACACCCGACTGTTCAACGGCGCTGTCAACGACTTCCCGCGCGTGG
AGACGCTCGTGATGGAGTCCACGTACGGCGGCCGCAACGACTACCAGACCGACCAGGAGGACTCCGAGCGCAAACTCAAA
CGCGTCATCAACGAGACCTACGAGGACGGCGGCAAGGTCCTCATTCCGGCGTTCGCCGTCGGCCGGTCCCAGGAGATGAT
GCTCGTGCTCGAAGAGGCGATGCGGGAGGGCGAGATCCCCGAGATGCCCATCCACCTCGACGGCATGATCTGGGAGGCCA
CTGCCATCCACACCACCTACCCCGAGTACCTCCGGGACGACCTCCGGGATCGCATCTTCCACAGCGACTCCAATCCGTTC
CTCGCGCCCCAGTTCAACCACATCGACGGCGGCGAGGAGGAACGGCAAGCGGTCGCCGACGACGACCAGTGTATCATCCT
CTCGACGTCGGGGATGGTCTCCGGCGGCCCCATCATGTCGTGGCTCGAACACATCGCGCCGGACCCCGATTCGACGCTGA
CGTTCGTCGGCTACCAGGCCCAGGGCACGCTTGGCCGCCGCATTCAGTCCGGGCGGGACAAGATCCCGATGCCCGACTCT
CGGAGCGGCGGCCGCACCGAGCACCTCCAACTCAACATGGGCGTCGAAACCGTCGACGGCTTCTCCGGACACGCCGACCG
CCAGGGCCTCGAAGACTTCGTGCGCACGATGAACCCCCGGCCGGAGAAAGTGCTGTGCGTCCACGGCGACGAGTCCTCCA
CACAGGACCTCTCGTCGGCGCTGTACCACGAGTTCAACATGCGGACGTTCGCGCCGAAGAACCTCGAAACGTTCCGGTTC
GTGTAG

Upstream 100 bases:

>100_bases
TTGCCACCGTGCCCCCTGGGCCCCGCGCACACCGGCCCACATCGTCGCAGGTCCGTTACGGACGGTGTCGCCACACTCGG
GAACCCCGTGTTAACCGATT

Downstream 100 bases:

>100_bases
CCGGCCACAGCCGTGGCGGTGGTCGCGGTGACCTATCAACTGTGATCGGTGTTCCGACAGGTCTATTATCATACCACCGG
TACGTGTTGGCGTGAATCGC

Product: mRNA 3'-end processing factor-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>641_residues
MSTVDRQLEELQDEIVSEIPADISVTDVKYEGPELVVYTRDPKQFAQDGDLVRRLASKLRKRITVRPDPAVLSSPKRARD
RVLDVIPEEAGVTNLDFHEDTGEVVIEAEKPGMVIGRHGSTLREITQEAGWTPEVVRTPPIESSTVSNVRNFLKQERDER
RDILETVGRQIHREEMQDDEYVRVTTLGCCREVGRASFVLSTPETRILVDCGDKPGSEDEVPYLQVQEALAGGANTIDAV
ILTHAHLDHSAFIPLLFKYGYDGPIYCTEPTRDLMGLLTLDYLDVAAKEGRAPPYDSEMVREAIKHCIPLEYGDVTDIAP
DVKLTFHNAGHILGSAVSHFHIGDGLYNVAFSGDIHYDDTRLFNGAVNDFPRVETLVMESTYGGRNDYQTDQEDSERKLK
RVINETYEDGGKVLIPAFAVGRSQEMMLVLEEAMREGEIPEMPIHLDGMIWEATAIHTTYPEYLRDDLRDRIFHSDSNPF
LAPQFNHIDGGEEERQAVADDDQCIILSTSGMVSGGPIMSWLEHIAPDPDSTLTFVGYQAQGTLGRRIQSGRDKIPMPDS
RSGGRTEHLQLNMGVETVDGFSGHADRQGLEDFVRTMNPRPEKVLCVHGDESSTQDLSSALYHEFNMRTFAPKNLETFRF
V

Sequences:
NA

Specific function: NA

COG id: COG1782

COG function: function code R; Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA