| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is hemH [H]
Identifier: 157826383
GI number: 157826383
Start: 1228631
End: 1229665
Strand: Reverse
Name: hemH [H]
Synonym: A1C_06875
Alternate gene names: 157826383
Gene position: 1229665-1228631 (Counterclockwise)
Preceding gene: 157826384
Following gene: 157826382
Centisome position: 99.89
GC content: 27.05
Gene sequence:
>1035_bases GTGAATAAAAGAAGAAAAATAGCAATAGTACTTTTTAATTTAGGAGGTCCAAAAGACCTTAAATCAGTGAAGTATTTTCT GTTTAATCTGTTCTATGACAAAGCTATAATTAATCTACCGAATCCATTACGATATATTATTGCAAAAATAATTTCTATCA CTAGAGAGAAAAAATCTCAAAAAATTTATTCTTTAATCGGTGGTAAATCTTCTTTACTTCAGGAAACAGAGGAGCAGAAA TTAGCACTAACCGAAAAGTTAAAACAACTTATAAAAGAAGATTTTGCTATTTTTATAAATATGAGATATTCAGCACCGTT TGCTAAAGAAGTAATAGGTCAAATAAAAATATATAATCCGAGTGAAATAATATTATTGCCTCTATATCCTCAATTTTCAA GTACTACGACAGGATCATCGGTTAAAAATTTTTTACAAAACCTTGATATTGATATTCCAATTAAAACAATTTGTTGTTAT CCTACAGAAGAACATTTTATAAAAACCCATGTTTCATTGATTAATGAAAAACTCAACGATAAAAATTTTCGTGTATTATT TTCTGCTCACGGGTTACCAGAAAAAATAATAAAAGCAGGTGACCCTTATAGTTTTCAGATAAAAGAAACTGTAAAAGCAA TAGTCAAAGAATTAAATATAAAAGATCTAGATTATAAGATAACTTACCAAAGTAGAGTAGGACATATAGAGTGGTTAAAA CCAAATACGGAAAATGAAATAGAGCTAGCAGGAAAGTTAAAAAAAAACATAATTATCGTACCTATATCATTTGTATCCGA GCATGTTGAAACACTAGTAGAACTTGATATTGAATATAAATTAATCGCAGATAAATATGAAATTCAATATACTCGAATTC CGACACTTGGAACAAATAAAATTTTTATTAATAGTTTGACAAATATATTGCTACGATTTATCAATAAGGTTGATACTAAT TTAGTCACGAGTAGTTCTAGTACAAGAATATGTCCAAGCGAATTTACTAAATGTTTATGTAAATTAACAAATTAA
Upstream 100 bases:
>100_bases GAAATGAAAGGAAAGAATTTTATCTTTAATTTAGGACATGGTATTTTGCCTAAAACACCTCCGGAAAATGTAGAATTTTT AACAGAGTGTATTAGGTCTT
Downstream 100 bases:
>100_bases TAAGGAAAAGAATGGCAAGTTACTATCTATGGTTTAAGTCAGTACATCTGATATCTGCTATATGTTGGATGGCAGGACTT CTTTATTTGCCTAGAATATA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MNKRRKIAIVLFNLGGPKDLKSVKYFLFNLFYDKAIINLPNPLRYIIAKIISITREKKSQKIYSLIGGKSSLLQETEEQK LALTEKLKQLIKEDFAIFINMRYSAPFAKEVIGQIKIYNPSEIILLPLYPQFSSTTTGSSVKNFLQNLDIDIPIKTICCY PTEEHFIKTHVSLINEKLNDKNFRVLFSAHGLPEKIIKAGDPYSFQIKETVKAIVKELNIKDLDYKITYQSRVGHIEWLK PNTENEIELAGKLKKNIIIVPISFVSEHVETLVELDIEYKLIADKYEIQYTRIPTLGTNKIFINSLTNILLRFINKVDTN LVTSSSSTRICPSEFTKCLCKLTN
Sequences:
>Translated_344_residues MNKRRKIAIVLFNLGGPKDLKSVKYFLFNLFYDKAIINLPNPLRYIIAKIISITREKKSQKIYSLIGGKSSLLQETEEQK LALTEKLKQLIKEDFAIFINMRYSAPFAKEVIGQIKIYNPSEIILLPLYPQFSSTTTGSSVKNFLQNLDIDIPIKTICCY PTEEHFIKTHVSLINEKLNDKNFRVLFSAHGLPEKIIKAGDPYSFQIKETVKAIVKELNIKDLDYKITYQSRVGHIEWLK PNTENEIELAGKLKKNIIIVPISFVSEHVETLVELDIEYKLIADKYEIQYTRIPTLGTNKIFINSLTNILLRFINKVDTN LVTSSSSTRICPSEFTKCLCKLTN >Mature_344_residues MNKRRKIAIVLFNLGGPKDLKSVKYFLFNLFYDKAIINLPNPLRYIIAKIISITREKKSQKIYSLIGGKSSLLQETEEQK LALTEKLKQLIKEDFAIFINMRYSAPFAKEVIGQIKIYNPSEIILLPLYPQFSSTTTGSSVKNFLQNLDIDIPIKTICCY PTEEHFIKTHVSLINEKLNDKNFRVLFSAHGLPEKIIKAGDPYSFQIKETVKAIVKELNIKDLDYKITYQSRVGHIEWLK PNTENEIELAGKLKKNIIIVPISFVSEHVETLVELDIEYKLIADKYEIQYTRIPTLGTNKIFINSLTNILLRFINKVDTN LVTSSSSTRICPSEFTKCLCKLTN
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=346, Percent_Identity=30.9248554913295, Blast_Score=144, Evalue=8e-35, Organism=Homo sapiens, GI60499025, Length=346, Percent_Identity=30.9248554913295, Blast_Score=144, Evalue=9e-35, Organism=Escherichia coli, GI1786681, Length=325, Percent_Identity=24.6153846153846, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324750, Length=322, Percent_Identity=29.8136645962733, Blast_Score=147, Evalue=3e-36, Organism=Drosophila melanogaster, GI17864156, Length=327, Percent_Identity=33.0275229357798, Blast_Score=164, Evalue=7e-41, Organism=Drosophila melanogaster, GI24651774, Length=261, Percent_Identity=30.2681992337165, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI45552018, Length=178, Percent_Identity=35.9550561797753, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39531; Mature: 39531
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRRKIAIVLFNLGGPKDLKSVKYFLFNLFYDKAIINLPNPLRYIIAKIISITREKKSQ CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KIYSLIGGKSSLLQETEEQKLALTEKLKQLIKEDFAIFINMRYSAPFAKEVIGQIKIYNP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHCEEEEECC SEIILLPLYPQFSSTTTGSSVKNFLQNLDIDIPIKTICCYPTEEHFIKTHVSLINEKLND CCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC KNFRVLFSAHGLPEKIIKAGDPYSFQIKETVKAIVKELNIKDLDYKITYQSRVGHIEWLK CCEEEEEECCCCCHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEC PNTENEIELAGKLKKNIIIVPISFVSEHVETLVELDIEYKLIADKYEIQYTRIPTLGTNK CCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCEEEEEECEEEEEEEECCCCCCCH IFINSLTNILLRFINKVDTNLVTSSSSTRICPSEFTKCLCKLTN HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNKRRKIAIVLFNLGGPKDLKSVKYFLFNLFYDKAIINLPNPLRYIIAKIISITREKKSQ CCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KIYSLIGGKSSLLQETEEQKLALTEKLKQLIKEDFAIFINMRYSAPFAKEVIGQIKIYNP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHCEEEEECC SEIILLPLYPQFSSTTTGSSVKNFLQNLDIDIPIKTICCYPTEEHFIKTHVSLINEKLND CCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC KNFRVLFSAHGLPEKIIKAGDPYSFQIKETVKAIVKELNIKDLDYKITYQSRVGHIEWLK CCEEEEEECCCCCHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEC PNTENEIELAGKLKKNIIIVPISFVSEHVETLVELDIEYKLIADKYEIQYTRIPTLGTNK CCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCEEEEEECEEEEEEEECCCCCCCH IFINSLTNILLRFINKVDTNLVTSSSSTRICPSEFTKCLCKLTN HHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]