| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is bdhA [H]
Identifier: 157826375
GI number: 157826375
Start: 1222470
End: 1222736
Strand: Direct
Name: bdhA [H]
Synonym: A1C_06835
Alternate gene names: 157826375
Gene position: 1222470-1222736 (Clockwise)
Preceding gene: 157826366
Following gene: 157826376
Centisome position: 99.3
GC content: 39.7
Gene sequence:
>267_bases GTGACTGAGAATAATATTACAGTTAATGCTATCTGTCCCGGTTACGTCAACACACCGCTCGTGCAGAATCAAATAGCAGA TACTGCTAAAGCTAGGCATATCAGTGAAGAATCAGCGTTAATGGATGTAATCCTTAAATCCCAAGCTACGAAAAAATTTG TAGAAGCTGATGAAATAGCAAACTTAGTAATATTCTTATGTGATGAAAAAGCATCATCAATAACAGGTAGTGGACTCTTG ATAGATGGCGGCTGGACGGCGCAGTAG
Upstream 100 bases:
>100_bases ACATTGCTTCCGCTCATGCATATGTCGCATCACCTTTAAGTCGACATATGTAGCAGCAAAGCATGGTATCATTGGGCTTA CCAAAACCGTTGCTTTAGAA
Downstream 100 bases:
>100_bases TTTTTAATTCCTAGTATTTGTTAGTTATTGAGAAATAACTAACAATAAAAACTTATTGCAAGAATTTAATTTACCCCTTT ACACTTGAAATAAATCAAAA
Product: oxidoreductase
Products: NA
Alternate protein names: BDH; 3-hydroxybutyrate dehydrogenase; 3-HBDH [H]
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTENNITVNAICPGYVNTPLVQNQIADTAKARHISEESALMDVILKSQATKKFVEADEIANLVIFLCDEKASSITGSGLL IDGGWTAQ
Sequences:
>Translated_88_residues MTENNITVNAICPGYVNTPLVQNQIADTAKARHISEESALMDVILKSQATKKFVEADEIANLVIFLCDEKASSITGSGLL IDGGWTAQ >Mature_87_residues TENNITVNAICPGYVNTPLVQNQIADTAKARHISEESALMDVILKSQATKKFVEADEIANLVIFLCDEKASSITGSGLLI DGGWTAQ
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011294 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.30 [H]
Molecular weight: Translated: 9438; Mature: 9307
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENNITVNAICPGYVNTPLVQNQIADTAKARHISEESALMDVILKSQATKKFVEADEIA CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC NLVIFLCDEKASSITGSGLLIDGGWTAQ EEEEEEECCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure TENNITVNAICPGYVNTPLVQNQIADTAKARHISEESALMDVILKSQATKKFVEADEIA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC NLVIFLCDEKASSITGSGLLIDGGWTAQ EEEEEEECCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9922248; 11481431 [H]