| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is mutL [H]
Identifier: 157826372
GI number: 157826372
Start: 1219680
End: 1221509
Strand: Reverse
Name: mutL [H]
Synonym: A1C_06805
Alternate gene names: 157826372
Gene position: 1221509-1219680 (Counterclockwise)
Preceding gene: 157826373
Following gene: 157826371
Centisome position: 99.22
GC content: 35.03
Gene sequence:
>1830_bases ATGACTATCAAATTTCTTTCAGAAAATACTATAAACCGAATTGCTGCCGGTGAGGTTATAGAAAGACCCGCATCGGTAGT AAAGGAATTAGTTGAAAATGCTGTTGATGCTGGTAGTACAAAAATAGATATTATTTTAGAACGTGCCGGTAAAAATCTAA TCATTATTTCCGATGACGGTATCGGTATGACTGATAAGGAATTAGAAATTGCCGTTGAACGTCACACAACTTCTAAGCTT GATGAAAGCGATTTCCTAAATATTCATACTTTCGGTTTTCGAGGTGAAGCATTGCCGTCTATTGCTGCCATTAGCAAAAT GCTAATTACTTCTAAGAAACAAGGGTATGACAAAGCATTTCAGATTAAGTTAATCGGTGGTAATGAAAAACAAGTTACTA TTTCTGTTCATAATGAAGGTACTAAAATAGAGATACGTGATTTATTTTTCGCAACACCTGCACGTTTAAAATTTCTTAGA TCCGACAAAACTGAGCTTGTAGCAACAGTAGACGTGGTTAAGAAAATCGCTCTAGCACATCCTAAAATTTCTTTTAGCTT AACGCATGATGACAGAAATCTGTTAAAGTTTAAAGGACACAATAAAGATGTAGAAACTAACCTAAAACAGCGTATAATTG ATGTAATAGGTGATGATTTTATAAAAAATGCTGCTTATATAGATTTCAAAACTCCTGATTTCTCTATTTGCGGCTATACT AGTATCCCGACATATAATAGAGCTTCAAGTGAAGATCAGTTTTTATTTATCAATAATAGACCGGTAAAAGATAAGTTGCT ACAAGTAGCTTTAAGGGTAGCATATCAGGATTATTTAGCTCGTGATCGTTATCCGCTGTGTGCTATATTCTTACAAATCG ATCCGCAGCTTGTTGACGTTAACGTACATCCGGCAAAAGCAGAGGTTAGATTTCATGACCCGAATTATGTACGAAACTTA TTAATAGAAGCGATTAAAAATGCTTTAACAAATACAAGCCATGTTACTTCTACTACTATCGCCTCTGATGCTCTTCAGTT ATTTAAAAATCATTTAGTTAACAAACAACCATCAGTAAGTAAAGCTGTAAGCGTGAATAGCAAACCTACAGATTATAGAC CTGCTATGTCGCCTAGTTTTAAATCTACGCCAAATACTGATTGTCAAAAACTAATCGATACATTACCGCACGCTAAAATA GAACAAGAAGTAGAAAGGCGTATAGAACGTGAGCAGCAAGCCCATAAACAATATAAACTTGGTGCAGCTAAAGCACAACT TCATACTACTTACATTATTTCACAAACCGAAGATAGTATAGTAATTACCGACCAGCATGCAGCACATGAACGTTTAGGAT ATGAAAAAATAAAAGATTACCTTAAAACGGAAGAGTTAATAAGACAGCGTTTGCTTATTCCTGAGATAGTAGAACTGCCA AATGAAAGAAACGCAGATTCTTTATATGAAAATAGAGAAAAACTATATAAACTTGGTTTAACTCTAGAAAAATTCGGTGA GAAATCTATTATAGTGACTGAAATTCCAAATATCCTTGGAGATGTCAACGTACAAAAATTAATTCATGATCTCGCTGATC ATTTATCGGATTTCGGTGAGAATATAGCTTTGACGGAGTTAATAGAGCATGTGACAGAAACTTATGCCTGTCATTACTCT ATTAGAGCAGGACGAAAATTGTCGGCAGATGAAATGAATGCTTTACTGCGTCAAATGGAAAATACGCCGTTTTCAGGTCA ATGTAATCACGGCAGACCTACTTATATTGAGTTGAAGCTTAAGGATATCGAACGCTTATTTGGACGGTAG
Upstream 100 bases:
>100_bases AACCTCCATATGACCATCCAAAAATTTATTTAGAGATAGATAAGGAAAAAAAGGAAGTTATCTGCCCATATTGTAGTAAG AAATTTAAATTAGTAACAAA
Downstream 100 bases:
>100_bases TGAATAGGTATTGCCTAGGGGAGCATAACGTTTTGATATCATTCCCGCTTTTGCGGAAATGATATCATTTTAGGCAATGC AGGTTAAATTATTTCATTTT
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 609; Mature: 608
Protein sequence:
>609_residues MTIKFLSENTINRIAAGEVIERPASVVKELVENAVDAGSTKIDIILERAGKNLIIISDDGIGMTDKELEIAVERHTTSKL DESDFLNIHTFGFRGEALPSIAAISKMLITSKKQGYDKAFQIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLR SDKTELVATVDVVKKIALAHPKISFSLTHDDRNLLKFKGHNKDVETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT SIPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPLCAIFLQIDPQLVDVNVHPAKAEVRFHDPNYVRNL LIEAIKNALTNTSHVTSTTIASDALQLFKNHLVNKQPSVSKAVSVNSKPTDYRPAMSPSFKSTPNTDCQKLIDTLPHAKI EQEVERRIEREQQAHKQYKLGAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIRQRLLIPEIVELP NERNADSLYENREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIHDLADHLSDFGENIALTELIEHVTETYACHYS IRAGRKLSADEMNALLRQMENTPFSGQCNHGRPTYIELKLKDIERLFGR
Sequences:
>Translated_609_residues MTIKFLSENTINRIAAGEVIERPASVVKELVENAVDAGSTKIDIILERAGKNLIIISDDGIGMTDKELEIAVERHTTSKL DESDFLNIHTFGFRGEALPSIAAISKMLITSKKQGYDKAFQIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLR SDKTELVATVDVVKKIALAHPKISFSLTHDDRNLLKFKGHNKDVETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT SIPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPLCAIFLQIDPQLVDVNVHPAKAEVRFHDPNYVRNL LIEAIKNALTNTSHVTSTTIASDALQLFKNHLVNKQPSVSKAVSVNSKPTDYRPAMSPSFKSTPNTDCQKLIDTLPHAKI EQEVERRIEREQQAHKQYKLGAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIRQRLLIPEIVELP NERNADSLYENREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIHDLADHLSDFGENIALTELIEHVTETYACHYS IRAGRKLSADEMNALLRQMENTPFSGQCNHGRPTYIELKLKDIERLFGR >Mature_608_residues TIKFLSENTINRIAAGEVIERPASVVKELVENAVDAGSTKIDIILERAGKNLIIISDDGIGMTDKELEIAVERHTTSKLD ESDFLNIHTFGFRGEALPSIAAISKMLITSKKQGYDKAFQIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRS DKTELVATVDVVKKIALAHPKISFSLTHDDRNLLKFKGHNKDVETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYTS IPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPLCAIFLQIDPQLVDVNVHPAKAEVRFHDPNYVRNLL IEAIKNALTNTSHVTSTTIASDALQLFKNHLVNKQPSVSKAVSVNSKPTDYRPAMSPSFKSTPNTDCQKLIDTLPHAKIE QEVERRIEREQQAHKQYKLGAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIRQRLLIPEIVELPN ERNADSLYENREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIHDLADHLSDFGENIALTELIEHVTETYACHYSI RAGRKLSADEMNALLRQMENTPFSGQCNHGRPTYIELKLKDIERLFGR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=312, Percent_Identity=36.2179487179487, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI4505913, Length=357, Percent_Identity=29.6918767507003, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI310128478, Length=357, Percent_Identity=29.6918767507003, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI4505911, Length=350, Percent_Identity=28, Blast_Score=113, Evalue=6e-25, Organism=Homo sapiens, GI189458898, Length=350, Percent_Identity=28, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI189458896, Length=339, Percent_Identity=29.7935103244838, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI310128480, Length=315, Percent_Identity=28.5714285714286, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI91992162, Length=294, Percent_Identity=29.2517006802721, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI91992160, Length=294, Percent_Identity=29.2517006802721, Blast_Score=89, Evalue=9e-18, Organism=Homo sapiens, GI263191589, Length=218, Percent_Identity=29.8165137614679, Blast_Score=86, Evalue=8e-17, Organism=Escherichia coli, GI1790612, Length=614, Percent_Identity=29.6416938110749, Blast_Score=258, Evalue=8e-70, Organism=Caenorhabditis elegans, GI71991825, Length=323, Percent_Identity=31.8885448916409, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17562796, Length=348, Percent_Identity=28.1609195402299, Blast_Score=119, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6323819, Length=343, Percent_Identity=34.6938775510204, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6324247, Length=339, Percent_Identity=28.023598820059, Blast_Score=117, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6325093, Length=726, Percent_Identity=21.900826446281, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI17136968, Length=317, Percent_Identity=35.3312302839117, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI17136970, Length=358, Percent_Identity=27.3743016759777, Blast_Score=113, Evalue=3e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 68983; Mature: 68851
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKFLSENTINRIAAGEVIERPASVVKELVENAVDAGSTKIDIILERAGKNLIIISDDG CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCCC IGMTDKELEIAVERHTTSKLDESDFLNIHTFGFRGEALPSIAAISKMLITSKKQGYDKAF CCCCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEE QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRSDKTELVATVDVVKKIALAH EEEEECCCCEEEEEEEECCCCEEEEEHEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC PKISFSLTHDDRNLLKFKGHNKDVETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT CCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC SIPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPLCAIFLQIDPQLVDV CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEE NVHPAKAEVRFHDPNYVRNLLIEAIKNALTNTSHVTSTTIASDALQLFKNHLVNKQPSVS EECCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH KAVSVNSKPTDYRPAMSPSFKSTPNTDCQKLIDTLPHAKIEQEVERRIEREQQAHKQYKL HHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC GAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIRQRLLIPEIVELP CHHHHHEEEEEEEEECCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHCC NERNADSLYENREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIHDLADHLSDFGE CCCCHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCHHHHCCCCHHHHHHHHHHHHHHHCC NIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPFSGQCNHGRPTYIELKL CCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEH KDIERLFGR HHHHHHHCC >Mature Secondary Structure TIKFLSENTINRIAAGEVIERPASVVKELVENAVDAGSTKIDIILERAGKNLIIISDDG EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCCC IGMTDKELEIAVERHTTSKLDESDFLNIHTFGFRGEALPSIAAISKMLITSKKQGYDKAF CCCCCCHHEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEE QIKLIGGNEKQVTISVHNEGTKIEIRDLFFATPARLKFLRSDKTELVATVDVVKKIALAH EEEEECCCCEEEEEEEECCCCEEEEEHEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC PKISFSLTHDDRNLLKFKGHNKDVETNLKQRIIDVIGDDFIKNAAYIDFKTPDFSICGYT CCEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC SIPTYNRASSEDQFLFINNRPVKDKLLQVALRVAYQDYLARDRYPLCAIFLQIDPQLVDV CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEE NVHPAKAEVRFHDPNYVRNLLIEAIKNALTNTSHVTSTTIASDALQLFKNHLVNKQPSVS EECCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH KAVSVNSKPTDYRPAMSPSFKSTPNTDCQKLIDTLPHAKIEQEVERRIEREQQAHKQYKL HHEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC GAAKAQLHTTYIISQTEDSIVITDQHAAHERLGYEKIKDYLKTEELIRQRLLIPEIVELP CHHHHHEEEEEEEEECCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHCC NERNADSLYENREKLYKLGLTLEKFGEKSIIVTEIPNILGDVNVQKLIHDLADHLSDFGE CCCCHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCHHHHCCCCHHHHHHHHHHHHHHHCC NIALTELIEHVTETYACHYSIRAGRKLSADEMNALLRQMENTPFSGQCNHGRPTYIELKL CCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEH KDIERLFGR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA