| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is hsdM [C]
Identifier: 157826362
GI number: 157826362
Start: 1213812
End: 1214204
Strand: Reverse
Name: hsdM [C]
Synonym: A1C_06755
Alternate gene names: 157826362
Gene position: 1214204-1213812 (Counterclockwise)
Preceding gene: 157826363
Following gene: 157826361
Centisome position: 98.63
GC content: 27.23
Gene sequence:
>393_bases GTGTTTCCTAGAAAAATTATTTTGATTGAAAATAATTTTGGTGGATATTCTACACCGAGAAATATAATCAAAACAATTAT TACCCTAATTGATCCAAAGTTTGGAGAAACTGTTTATGATCATTTTTGTGGTGCAGGTGGTGTTTTAACTGAAGTTGTTA ATTATATAAAAGAAAATAATATAATTAACACTGAAGAAGATTTAGAAAAGTTAATGTTTAATACATTATATGGACGAGAG CTAACTAAAACTACTAGAATCGCAAAGATGAACACTGTTTTACAATGTTATGATGGACATAGTGAAATCCAGCAAATAGA TACACTAAGAGTAGATGAGTTGTTTTTATTTTATACTAATAATGAAGCTAAATTAAATTCACTTTGGCAATGA
Upstream 100 bases:
>100_bases CTATTTCTCTAAGTAATAATACTCTTCGTCATATTATTGATGCAATCGATCCTCTCATTTTATCTACAATTGATACTGAT ATAAAATGTGATGCATTTGA
Downstream 100 bases:
>100_bases TTGATGTACATTCACTACTTAAAAGATTTGATTGGTTTTAAGTCTGTAACTCCTGAAAACGATGGTGCTATTGAGTATAT TGATGATTTGCTTAAACAGC
Product: Type I restriction-modification system methyltransferase subunit
Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]
Alternate protein names: N-6 DNA Methylase; Restriction- Protein; Type I Restriction- System M Subunit
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MFPRKIILIENNFGGYSTPRNIIKTIITLIDPKFGETVYDHFCGAGGVLTEVVNYIKENNIINTEEDLEKLMFNTLYGRE LTKTTRIAKMNTVLQCYDGHSEIQQIDTLRVDELFLFYTNNEAKLNSLWQ
Sequences:
>Translated_130_residues MFPRKIILIENNFGGYSTPRNIIKTIITLIDPKFGETVYDHFCGAGGVLTEVVNYIKENNIINTEEDLEKLMFNTLYGRE LTKTTRIAKMNTVLQCYDGHSEIQQIDTLRVDELFLFYTNNEAKLNSLWQ >Mature_130_residues MFPRKIILIENNFGGYSTPRNIIKTIITLIDPKFGETVYDHFCGAGGVLTEVVNYIKENNIINTEEDLEKLMFNTLYGRE LTKTTRIAKMNTVLQCYDGHSEIQQIDTLRVDELFLFYTNNEAKLNSLWQ
Specific function: The M And S Subunits Together Form A Methyltransferase (Mtase) That Methylates Two Adenine Residues In Complementary Strands Of A Bipartite DNA Recognition Sequence. In The Presence Of The R Subunit The Complex Can Also Act As An Endonuclease, Binding To
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.72 [C]
Molecular weight: Translated: 15073; Mature: 15073
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPRKIILIENNFGGYSTPRNIIKTIITLIDPKFGETVYDHFCGAGGVLTEVVNYIKENN CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCC IINTEEDLEKLMFNTLYGRELTKTTRIAKMNTVLQCYDGHSEIQQIDTLRVDELFLFYTN CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEC NEAKLNSLWQ CCCCHHCCCC >Mature Secondary Structure MFPRKIILIENNFGGYSTPRNIIKTIITLIDPKFGETVYDHFCGAGGVLTEVVNYIKENN CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCC IINTEEDLEKLMFNTLYGRELTKTTRIAKMNTVLQCYDGHSEIQQIDTLRVDELFLFYTN CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEEC NEAKLNSLWQ CCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]
Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA