| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826330
Identifier: 157826330
GI number: 157826330
Start: 1184267
End: 1184896
Strand: Reverse
Name: 157826330
Synonym: A1C_06595
Alternate gene names: NA
Gene position: 1184896-1184267 (Counterclockwise)
Preceding gene: 157826331
Following gene: 157826329
Centisome position: 96.25
GC content: 36.98
Gene sequence:
>630_bases ATGAGCGCAGTTTTTGAAATACCAAACGGTGAAAGCAAAGTTTTACTACATTGTTGTTGTGCTCCTTGCGTTGGTCCTTT AATGGAAAAAATGATAGAGAGCGACATTAAATATACACTTTTTTTTTACAATCCTAATATTCACCCTAAAAAAGAATATG AGCTTCGTAAGAACGAAAATATTAAGTTTGCCGAGAAGCATAATATAGAATTTATCGACGCAGATTATGATCCACAAAAT TGGTTTAGAAGAGCTAAAGGGATGGAATTTGAGCCTGAGAGAGGTATACGCTGTACAATGTGTTTTGATATGCGTTTCGA GCGTACGGCTTTATATGCTTATGAGAACGGCTTTAAAGTTATAACTAGCTCGCTTGGTATTTCTAGATGGAAAGATATGA ACCAAATTAATGAATCAGGAACTAGGGCGGCATCTCATTATGCAGGGATAACCTATTGGACTTATAATTGGCGTAAAGAC GGTGGTGCTAGTCGTATGTATGAAATCGCTAAAGAAGAGCATTTTTATAAGCAAGAATTTTGCGGTTGTGTTTATTCTTT CCGTGATACTAACGATTGGCGAGTAGCAAATGATCGCCCTAAGATCGAGATCGGCAAGGAGTATTATTAG
Upstream 100 bases:
>100_bases CTATTGCATATTATTTAATTGCACTTGCATTATTGTCTTCTATTCTTCTAAAATTCTACAAAGAAACTTATAAAAAGAAT TTGGTAAATTAGGTTCTATG
Downstream 100 bases:
>100_bases TCTCTTAAATTAATAAAAAATATTTTTTAAATCTTTATATTATAATAATCTAGACAATCTAGCTATATTAGGGTTTATTA TGAATAAATGGCAGTTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSAVFEIPNGESKVLLHCCCAPCVGPLMEKMIESDIKYTLFFYNPNIHPKKEYELRKNENIKFAEKHNIEFIDADYDPQN WFRRAKGMEFEPERGIRCTMCFDMRFERTALYAYENGFKVITSSLGISRWKDMNQINESGTRAASHYAGITYWTYNWRKD GGASRMYEIAKEEHFYKQEFCGCVYSFRDTNDWRVANDRPKIEIGKEYY
Sequences:
>Translated_209_residues MSAVFEIPNGESKVLLHCCCAPCVGPLMEKMIESDIKYTLFFYNPNIHPKKEYELRKNENIKFAEKHNIEFIDADYDPQN WFRRAKGMEFEPERGIRCTMCFDMRFERTALYAYENGFKVITSSLGISRWKDMNQINESGTRAASHYAGITYWTYNWRKD GGASRMYEIAKEEHFYKQEFCGCVYSFRDTNDWRVANDRPKIEIGKEYY >Mature_208_residues SAVFEIPNGESKVLLHCCCAPCVGPLMEKMIESDIKYTLFFYNPNIHPKKEYELRKNENIKFAEKHNIEFIDADYDPQNW FRRAKGMEFEPERGIRCTMCFDMRFERTALYAYENGFKVITSSLGISRWKDMNQINESGTRAASHYAGITYWTYNWRKDG GASRMYEIAKEEHFYKQEFCGCVYSFRDTNDWRVANDRPKIEIGKEYY
Specific function: Unknown
COG id: COG1636
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003828 [H]
Pfam domain/function: PF02677 DUF208 [H]
EC number: NA
Molecular weight: Translated: 24824; Mature: 24693
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVFEIPNGESKVLLHCCCAPCVGPLMEKMIESDIKYTLFFYNPNIHPKKEYELRKNEN CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHCCCCC IKFAEKHNIEFIDADYDPQNWFRRAKGMEFEPERGIRCTMCFDMRFERTALYAYENGFKV EEEEECCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEE ITSSLGISRWKDMNQINESGTRAASHYAGITYWTYNWRKDGGASRMYEIAKEEHFYKQEF EHHHCCHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH CGCVYSFRDTNDWRVANDRPKIEIGKEYY HHHHEEECCCCCEEEECCCCCEEECCCCC >Mature Secondary Structure SAVFEIPNGESKVLLHCCCAPCVGPLMEKMIESDIKYTLFFYNPNIHPKKEYELRKNEN CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHCCCCC IKFAEKHNIEFIDADYDPQNWFRRAKGMEFEPERGIRCTMCFDMRFERTALYAYENGFKV EEEEECCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCEE ITSSLGISRWKDMNQINESGTRAASHYAGITYWTYNWRKDGGASRMYEIAKEEHFYKQEF EHHHCCHHHHHHHHHHHHCCCHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH CGCVYSFRDTNDWRVANDRPKIEIGKEYY HHHHEEECCCCCEEEECCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]