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The map label for this gene is glyQ

Identifier: 157826328

GI number: 157826328

Start: 1182946

End: 1183815

Strand: Reverse

Name: glyQ

Synonym: A1C_06585

Alternate gene names: 157826328

Gene position: 1183815-1182946 (Counterclockwise)

Preceding gene: 157826329

Following gene: 157826327

Centisome position: 96.16

GC content: 40.23

Gene sequence:

>870_bases
ATGAAAAAACTATCATTTCAACAAATTATTCTGACATTACAAAATTATTGGCAGGATTATGGTTGCGGCATATTACAGCC
TTACGATGCCCATGTCGGAGCCGGTACGTTTCACCCTGCAACGGTGCTTAGATGCCTTGGTACTAAACCTTGGTCTGTTG
CATATGTTCAACCATCAAGAAGACCAGGCGATAGCAGATACGGTATGCACCCCAATAGAATGCAGCATTATTACCAGTTT
CAAGTTATCTTAAAACCGTCGCCAGATGATATTCAAGATTTATATCTTAAAAATTTGGAATGTTTGGGGATAGATTTAAA
AAACCATGATATCAGATTTGTTGAAGATGATTGGGAGTCACCGACGCTCGGAGCCTCAGGGCTCGGTTGGGAAGTATGGT
GCGATGGTATGGAAGTATCACAATTTACTTATATGCAGCAAATCGGTGGGATTGAATGTCGTCCCGTTGCGTGTGAGATC
ACTTATGGCTTAGAAAGGCTTGCGTTATACATCCAAGGCGTTGATGTAGTCAAAGCACTTGATTGGAACGGACAAATAGG
TGAAAAAGCTTTAAAATACGGTGAAGTAGATTTCGAGGCTGAGCGGCAATTTTCGAAATATAATTTAGAGCTTGCCGATA
GCAAGATGTTGCTAAGACATTTTAAAGATAGTGAAGAACAATGCGAGAGGCTAGTGAAGGCAAACTTACCTATGCCGGCT
TATGATGAATGCCTTAAAGCAAGTCATTACTTTAATCAATTAAATGCGTTAGGTGTAATTAGTGTAACGGAGCGTGCTTC
TTATGTTTTAAGAGTGCGTCATTTAGCTAGAATTTGTTGTATGAAATGGTTGGAGTTAAGCGGTGAGTGA

Upstream 100 bases:

>100_bases
ATATTAGTTACTAGAAATACCAAACATTATAATATATTTAACATTAAAATATTTAATCCTTTTGACTGATAAAAATTTTA
TTCCTCACTAATAACTTTTT

Downstream 100 bases:

>100_bases
ATTATTATTAGAGCTATTTAGTGAAGAAATACCTGCATTTATGCAAAAAAACGCTGAAGAGGGGTATTTAAATATATTCA
CACAAATTTTTGCAGAAAGC

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKKLSFQQIILTLQNYWQDYGCGILQPYDAHVGAGTFHPATVLRCLGTKPWSVAYVQPSRRPGDSRYGMHPNRMQHYYQF
QVILKPSPDDIQDLYLKNLECLGIDLKNHDIRFVEDDWESPTLGASGLGWEVWCDGMEVSQFTYMQQIGGIECRPVACEI
TYGLERLALYIQGVDVVKALDWNGQIGEKALKYGEVDFEAERQFSKYNLELADSKMLLRHFKDSEEQCERLVKANLPMPA
YDECLKASHYFNQLNALGVISVTERASYVLRVRHLARICCMKWLELSGE

Sequences:

>Translated_289_residues
MKKLSFQQIILTLQNYWQDYGCGILQPYDAHVGAGTFHPATVLRCLGTKPWSVAYVQPSRRPGDSRYGMHPNRMQHYYQF
QVILKPSPDDIQDLYLKNLECLGIDLKNHDIRFVEDDWESPTLGASGLGWEVWCDGMEVSQFTYMQQIGGIECRPVACEI
TYGLERLALYIQGVDVVKALDWNGQIGEKALKYGEVDFEAERQFSKYNLELADSKMLLRHFKDSEEQCERLVKANLPMPA
YDECLKASHYFNQLNALGVISVTERASYVLRVRHLARICCMKWLELSGE
>Mature_289_residues
MKKLSFQQIILTLQNYWQDYGCGILQPYDAHVGAGTFHPATVLRCLGTKPWSVAYVQPSRRPGDSRYGMHPNRMQHYYQF
QVILKPSPDDIQDLYLKNLECLGIDLKNHDIRFVEDDWESPTLGASGLGWEVWCDGMEVSQFTYMQQIGGIECRPVACEI
TYGLERLALYIQGVDVVKALDWNGQIGEKALKYGEVDFEAERQFSKYNLELADSKMLLRHFKDSEEQCERLVKANLPMPA
YDECLKASHYFNQLNALGVISVTERASYVLRVRHLARICCMKWLELSGE

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=276, Percent_Identity=59.0579710144928, Blast_Score=332, Evalue=2e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_RICAH (A8GQ65)

Other databases:

- EMBL:   CP000847
- RefSeq:   YP_001494048.1
- ProteinModelPortal:   A8GQ65
- SMR:   A8GQ65
- STRING:   A8GQ65
- GeneID:   5645293
- GenomeReviews:   CP000847_GR
- KEGG:   rak:A1C_06585
- NMPDR:   fig|293614.3.peg.1246
- eggNOG:   COG0752
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- ProtClustDB:   PRK09348
- BioCyc:   RAKA293614:A1C_06585-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 33249; Mature: 33249

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSFQQIILTLQNYWQDYGCGILQPYDAHVGAGTFHPATVLRCLGTKPWSVAYVQPSR
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCC
RPGDSRYGMHPNRMQHYYQFQVILKPSPDDIQDLYLKNLECLGIDLKNHDIRFVEDDWES
CCCCCCCCCCHHHHHEEEEEEEEECCCCCHHHHHHHCCCEEEEEEECCCCEEEEECCCCC
PTLGASGLGWEVWCDGMEVSQFTYMQQIGGIECRPVACEITYGLERLALYIQGVDVVKAL
CCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCHHHEEEE
DWNGQIGEKALKYGEVDFEAERQFSKYNLELADSKMLLRHFKDSEEQCERLVKANLPMPA
CCCCCHHHHHHHHCCCCCHHHHHHHHCCEEECHHHHHHHHHCCCHHHHHHHHHCCCCCCH
YDECLKASHYFNQLNALGVISVTERASYVLRVRHLARICCMKWLELSGE
HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLSFQQIILTLQNYWQDYGCGILQPYDAHVGAGTFHPATVLRCLGTKPWSVAYVQPSR
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCC
RPGDSRYGMHPNRMQHYYQFQVILKPSPDDIQDLYLKNLECLGIDLKNHDIRFVEDDWES
CCCCCCCCCCHHHHHEEEEEEEEECCCCCHHHHHHHCCCEEEEEEECCCCEEEEECCCCC
PTLGASGLGWEVWCDGMEVSQFTYMQQIGGIECRPVACEITYGLERLALYIQGVDVVKAL
CCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCHHHEEEE
DWNGQIGEKALKYGEVDFEAERQFSKYNLELADSKMLLRHFKDSEEQCERLVKANLPMPA
CCCCCHHHHHHHHCCCCCHHHHHHHHCCEEECHHHHHHHHHCCCHHHHHHHHHCCCCCCH
YDECLKASHYFNQLNALGVISVTERASYVLRVRHLARICCMKWLELSGE
HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA