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The map label for this gene is dnaQ [H]

Identifier: 157826195

GI number: 157826195

Start: 1043059

End: 1043748

Strand: Reverse

Name: dnaQ [H]

Synonym: A1C_05860

Alternate gene names: 157826195

Gene position: 1043748-1043059 (Counterclockwise)

Preceding gene: 157826196

Following gene: 157826194

Centisome position: 84.78

GC content: 33.62

Gene sequence:

>690_bases
ATGTCAAGTTTAAGAGAAATAATTTTAGATACCGAAACTACGGGACTTGACCCACGACAAGGTCACCGCATCGTTGAAAT
TGCTGCAATTGAAATGATGAATAAGGTGTTAACAGGTAGGAATTTTCATTTTTATATTAATCCTGAGCGAGACATTCCGT
TTGATGCGTATAGAATTCACGGTATTTCCGGTGAGTTTTTAAAGGACAAGCCTTTGTTTCACACAATAGCCGATGATTTT
TTAGAATTTATTGCAGATAGCAAGCTTGTTATTCATAATGCTCCGTTCGATATTAAATTTCTAAATCACGAATTATCATT
ATTAAAAAGAGCAGAAATCAAACTTTTAGAACTGTCCAATGCGATAGACACTTTAGTTATGGCTAGAAGTATGTTTCCAG
GCTCAAAATATAATCTTGATGCATTATGTAAAAGATTTAAAGTTGATAATTCAGGTAGGCAGCTTCACGGGGCTTTGAAA
GATGCGGCATTACTTGCAGAAGTATATGTGGAACTAACGGGTGGTAGACAATCCTCTTTTAAAATGGTTGATAAATCTGC
TGGAATAAATAATTTAGCAATTAATCAAGTAAATAGCAAAACAGAGCAAGCTAGTATTGTTATTAAACCTACAAAAGAAG
AGCTGCAAAAACATAAAGAGTTTCTTAGTAGTATTTTAAAAACTGCTTAG

Upstream 100 bases:

>100_bases
GATTGCCGCGTCGCTTCGCTCCTAGCAATGACGATTTTGGTATCCACGCAACAACACCCGTTCGCAGTGACGATTTTAAA
AGACTAATAAAGGATTGGGA

Downstream 100 bases:

>100_bases
TAAAATATCGTTGCGAGGAGCCGTAGGTGACGCGGCAATCCAGAAAATAATTAAAAAAAATCCTGTAAATCCGAATTTTT
AACTGGATTGCTTCGTCAAA

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSSLREIILDTETTGLDPRQGHRIVEIAAIEMMNKVLTGRNFHFYINPERDIPFDAYRIHGISGEFLKDKPLFHTIADDF
LEFIADSKLVIHNAPFDIKFLNHELSLLKRAEIKLLELSNAIDTLVMARSMFPGSKYNLDALCKRFKVDNSGRQLHGALK
DAALLAEVYVELTGGRQSSFKMVDKSAGINNLAINQVNSKTEQASIVIKPTKEELQKHKEFLSSILKTA

Sequences:

>Translated_229_residues
MSSLREIILDTETTGLDPRQGHRIVEIAAIEMMNKVLTGRNFHFYINPERDIPFDAYRIHGISGEFLKDKPLFHTIADDF
LEFIADSKLVIHNAPFDIKFLNHELSLLKRAEIKLLELSNAIDTLVMARSMFPGSKYNLDALCKRFKVDNSGRQLHGALK
DAALLAEVYVELTGGRQSSFKMVDKSAGINNLAINQVNSKTEQASIVIKPTKEELQKHKEFLSSILKTA
>Mature_228_residues
SSLREIILDTETTGLDPRQGHRIVEIAAIEMMNKVLTGRNFHFYINPERDIPFDAYRIHGISGEFLKDKPLFHTIADDFL
EFIADSKLVIHNAPFDIKFLNHELSLLKRAEIKLLELSNAIDTLVMARSMFPGSKYNLDALCKRFKVDNSGRQLHGALKD
AALLAEVYVELTGGRQSSFKMVDKSAGINNLAINQVNSKTEQASIVIKPTKEELQKHKEFLSSILKTA

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786409, Length=228, Percent_Identity=45.1754385964912, Blast_Score=203, Evalue=9e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006309
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 25841; Mature: 25710

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLREIILDTETTGLDPRQGHRIVEIAAIEMMNKVLTGRNFHFYINPERDIPFDAYRIH
CCCHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEE
GISGEFLKDKPLFHTIADDFLEFIADSKLVIHNAPFDIKFLNHELSLLKRAEIKLLELSN
CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHH
AIDTLVMARSMFPGSKYNLDALCKRFKVDNSGRQLHGALKDAALLAEVYVELTGGRQSSF
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
KMVDKSAGINNLAINQVNSKTEQASIVIKPTKEELQKHKEFLSSILKTA
HHHHHCCCCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSLREIILDTETTGLDPRQGHRIVEIAAIEMMNKVLTGRNFHFYINPERDIPFDAYRIH
CCHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEE
GISGEFLKDKPLFHTIADDFLEFIADSKLVIHNAPFDIKFLNHELSLLKRAEIKLLELSN
CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHH
AIDTLVMARSMFPGSKYNLDALCKRFKVDNSGRQLHGALKDAALLAEVYVELTGGRQSSF
HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
KMVDKSAGINNLAINQVNSKTEQASIVIKPTKEELQKHKEFLSSILKTA
HHHHHCCCCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]