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The map label for this gene is rsmI [H]

Identifier: 157826166

GI number: 157826166

Start: 1017240

End: 1018076

Strand: Direct

Name: rsmI [H]

Synonym: A1C_05715

Alternate gene names: 157826166

Gene position: 1017240-1018076 (Clockwise)

Preceding gene: 157826164

Following gene: 157826167

Centisome position: 82.63

GC content: 30.23

Gene sequence:

>837_bases
ATGATTTTAAAATCGGGATTATATATTGTTTCAACGCCAATAGGCAATTTTGAAGATATAACGCTTCGTGCTATATCGAC
TCTAAAAAACTCAGATATTATCTTATGTGAGGATACTAGAATATCCCAAAAATTGCTAGCAAAACATGATATTCATACTA
AATTACAAATTTATAATGATCATAGTGACGAGAAAGATAGAGAAAATATTATAAGTTTAATAAAATCTGGCAATATAATA
AGCTTAATTTCTGATGCAGGAACTCCTTTAATTTCCGATCCTGGCTATAAGTTAGTTAAAGGGTTGCGTAGTCTTAATTG
TCATGTAGACGTAGTACCAGGGGTATCTGCACTGATTACTGCTCTAACTTTATCGACTCTGCCTACTGATCGATTTTTAT
TTCACGGGTTTTTACCTAAAACTACAGAAAGTAAGCAAAAGATTTTTTATGAATTAGTAAATCTTAAGGCTACATTGATT
TTTTTTGAAACTGCTCCTCGTTTGATAAACACCTTATCGGTAGCTAAAAAAATACTAGGAAACCGAGAAATATGTGTAGC
TCGTGAGTTAACTAAACTGTATCAGGAAATAAAAACAGGGGATATAGATGAAATAATAGAGTTCTATCAAAACAATATTT
TAAAAGGTGAGATAGTATTGTTGATTTCAGGAATTTTACAAGAACAAAACCAACAAATCAATTTAGAAAAATTGATAGAA
CTTTGCTTAAGTAAAAACTTAAGTAGCAAAACCACTACCGAACTTGCTTATGATAAATTCAAAGCCGTTTATAGTAAGAA
AGAAATATATAGATTGGTGAACAACCAAAAAACTTAA

Upstream 100 bases:

>100_bases
GAGTTTGACAGGATGTTAAATATATCAAGAAAAAAAATGATAGAACGATTCGTAGTTTATGTTTTATACTAGCCATAATA
TTACTTAAAATTAAAAAACT

Downstream 100 bases:

>100_bases
TATACTTCTTCTGAAACTCTACTTCTAGAGGTAATTTGTACGTCGATCCGGTACTCCTCGAATCCTAACGTATGTCTATA
TACGATGCAGTGCTGCGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MILKSGLYIVSTPIGNFEDITLRAISTLKNSDIILCEDTRISQKLLAKHDIHTKLQIYNDHSDEKDRENIISLIKSGNII
SLISDAGTPLISDPGYKLVKGLRSLNCHVDVVPGVSALITALTLSTLPTDRFLFHGFLPKTTESKQKIFYELVNLKATLI
FFETAPRLINTLSVAKKILGNREICVARELTKLYQEIKTGDIDEIIEFYQNNILKGEIVLLISGILQEQNQQINLEKLIE
LCLSKNLSSKTTTELAYDKFKAVYSKKEIYRLVNNQKT

Sequences:

>Translated_278_residues
MILKSGLYIVSTPIGNFEDITLRAISTLKNSDIILCEDTRISQKLLAKHDIHTKLQIYNDHSDEKDRENIISLIKSGNII
SLISDAGTPLISDPGYKLVKGLRSLNCHVDVVPGVSALITALTLSTLPTDRFLFHGFLPKTTESKQKIFYELVNLKATLI
FFETAPRLINTLSVAKKILGNREICVARELTKLYQEIKTGDIDEIIEFYQNNILKGEIVLLISGILQEQNQQINLEKLIE
LCLSKNLSSKTTTELAYDKFKAVYSKKEIYRLVNNQKT
>Mature_278_residues
MILKSGLYIVSTPIGNFEDITLRAISTLKNSDIILCEDTRISQKLLAKHDIHTKLQIYNDHSDEKDRENIISLIKSGNII
SLISDAGTPLISDPGYKLVKGLRSLNCHVDVVPGVSALITALTLSTLPTDRFLFHGFLPKTTESKQKIFYELVNLKATLI
FFETAPRLINTLSVAKKILGNREICVARELTKLYQEIKTGDIDEIIEFYQNNILKGEIVLLISGILQEQNQQINLEKLIE
LCLSKNLSSKTTTELAYDKFKAVYSKKEIYRLVNNQKT

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=221, Percent_Identity=40.2714932126697, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31370; Mature: 31370

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKSGLYIVSTPIGNFEDITLRAISTLKNSDIILCEDTRISQKLLAKHDIHTKLQIYND
CEEECCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECC
HSDEKDRENIISLIKSGNIISLISDAGTPLISDPGYKLVKGLRSLNCHVDVVPGVSALIT
CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHH
ALTLSTLPTDRFLFHGFLPKTTESKQKIFYELVNLKATLIFFETAPRLINTLSVAKKILG
HHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHC
NREICVARELTKLYQEIKTGDIDEIIEFYQNNILKGEIVLLISGILQEQNQQINLEKLIE
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH
LCLSKNLSSKTTTELAYDKFKAVYSKKEIYRLVNNQKT
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MILKSGLYIVSTPIGNFEDITLRAISTLKNSDIILCEDTRISQKLLAKHDIHTKLQIYND
CEEECCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCEEEEEECC
HSDEKDRENIISLIKSGNIISLISDAGTPLISDPGYKLVKGLRSLNCHVDVVPGVSALIT
CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHH
ALTLSTLPTDRFLFHGFLPKTTESKQKIFYELVNLKATLIFFETAPRLINTLSVAKKILG
HHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHC
NREICVARELTKLYQEIKTGDIDEIIEFYQNNILKGEIVLLISGILQEQNQQINLEKLIE
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH
LCLSKNLSSKTTTELAYDKFKAVYSKKEIYRLVNNQKT
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]