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The map label for this gene is ihfA [C]

Identifier: 157826134

GI number: 157826134

Start: 988794

End: 989084

Strand: Reverse

Name: ihfA [C]

Synonym: A1C_05555

Alternate gene names: 157826134

Gene position: 989084-988794 (Counterclockwise)

Preceding gene: 157826135

Following gene: 157826133

Centisome position: 80.34

GC content: 29.55

Gene sequence:

>291_bases
ATGACTATTACCAAAGAAAAAATTTCAGCTATGTTAAGCTCCAAATTGGGTTTTTCAAATAATTTATGCAAGGAAATAGT
TAATACGGTTTTTTCTAATATTTTAGAAATAGCAAGAGAGCAAAAATTAACTTTAAAGAATTTCGGTCGCTTTGAGGTTA
AACACAAAAATCCACGTCCCGGAATAAATTTTCATACTAAATCACCAGTAATTATAGAATCAAAAAAGAGTTTGCGTTTT
GTCCCTTCTGCCAAATTAAAAGCCCTAGTGAATAAACATGACAAACAATAA

Upstream 100 bases:

>100_bases
GCAACAGCAAATTCATAATTTTATTGAGTGGGTTTTGGTTCTACTATTGTCACCCCGTGGCTTGACCACGGGGGTGACAC
AATTAAAATCGGTATTATTT

Downstream 100 bases:

>100_bases
GTTCACAAAAAAATATTATTCTGCTAGTGAAGTGATTAAGCATTTAAATATTGCTGTACATCAATTAAGATATCTAGAGG
CAAAAATCCCTGATGTATCT

Product: integration host factor alpha-subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MTITKEKISAMLSSKLGFSNNLCKEIVNTVFSNILEIAREQKLTLKNFGRFEVKHKNPRPGINFHTKSPVIIESKKSLRF
VPSAKLKALVNKHDKQ

Sequences:

>Translated_96_residues
MTITKEKISAMLSSKLGFSNNLCKEIVNTVFSNILEIAREQKLTLKNFGRFEVKHKNPRPGINFHTKSPVIIESKKSLRF
VPSAKLKALVNKHDKQ
>Mature_95_residues
TITKEKISAMLSSKLGFSNNLCKEIVNTVFSNILEIAREQKLTLKNFGRFEVKHKNPRPGINFHTKSPVIIESKKSLRFV
PSAKLKALVNKHDKQ

Specific function: This Protein Is One Of The Two Subunits Of Integration Host Factor, A Specific DNA-Binding Protein That Functions In Genetic Recombination As Well As In Transcriptional And Translational Control. Ihf Also Plays A Crucial Role In The Lysogenic Life Cycle O

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR010992 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 10936; Mature: 10805

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITKEKISAMLSSKLGFSNNLCKEIVNTVFSNILEIAREQKLTLKNFGRFEVKHKNPRP
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCC
GINFHTKSPVIIESKKSLRFVPSAKLKALVNKHDKQ
CCCCCCCCCEEEECCCCEECCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TITKEKISAMLSSKLGFSNNLCKEIVNTVFSNILEIAREQKLTLKNFGRFEVKHKNPRP
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCC
GINFHTKSPVIIESKKSLRFVPSAKLKALVNKHDKQ
CCCCCCCCCEEEECCCCEECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA