| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is nagZ [H]
Identifier: 157826132
GI number: 157826132
Start: 987469
End: 988458
Strand: Reverse
Name: nagZ [H]
Synonym: A1C_05545
Alternate gene names: 157826132
Gene position: 988458-987469 (Counterclockwise)
Preceding gene: 157826133
Following gene: 157826131
Centisome position: 80.29
GC content: 36.57
Gene sequence:
>990_bases ATGATAATAAGACAAAGAGCAAAACCGGTAATTATAGGCATATCCGGTCCTGAATTAACCGATGCTGAAAGAGCATTATT TGAAAAGCATAATCCTTTAGGTGTGATTTTATTCCGTCGTAATATTAGAAAGAATGATAACGGTGAGCAGGATAAAGAGA CTCTTATTAAGCTTATTGCAGATATAAAAGAAGTATTAGGAGCAAATACTATCATCTCTATAGATCAAGAGGGCGGTAGG GTAAAAAGGCTCATAGCACCAACTTTTTATGACGCTCCGGCTGCTCAAACTTTCGTTGATGTGCAAGAGTGCAAACAAAA CTATATCAATATAGGCAAAGAGTTAAGAGAAGTAGGTATTAATCTAGATTTTGCTCCGGTAGTGGATTTGATCCACGAAG GAGCAGACAAGATAGTCGGCGATAGAAGTTTCGGCTCAGATCTGGAGGTAGTCGTGCCTTTATGTTTAGCTGCTATAGAT GGATTACAAGAAGAGAAAGTCGTGGCTTGTATAAAACATATTCCTGGTCATGGTAGAGCTAAAGTGGATAGCCATATAGG GTTACCTATTGTTGATACTAGCTTAAAAGAACTAGAGGATACAGACTTTAAAGTATTTAAGGAGTTAGCGAAGTACGATA ATATTAAACTTGCTATGACTGCACATATAATTTATAAAGCTCTTGATCCTGAGAACCCTGCCACCCTATCCAAAAAAGTT AAAGCCTATATTAAAAATAATATAGGCTTTAAAGGGCTTATTATTTCCGATGCAATAGATATGAAAGCTTTAAGCGGTAG TATGGCAGATATTACCAAAGGAGTTTTAGATGCAGGCGTAGATATAGTGCTTGAATGTACCGGAGAATTTAACAAAATGT CTGAAGTTCTAGGTAGTGTTTCGGAAGAGTCTATAGATAAATTTTCTGACCTATTAATGTGCCGATTTGGGATGAACAAT CAATCGCCTTTAGTCGAATGTAAGATATAA
Upstream 100 bases:
>100_bases CTTCAAATAAAAAAAATTCTTGCCGACTCCTCGATGGCTTGCGTATAGTACTTGTCATATAACGTTTTATAACGTTTTAA AGACAAGAAAAGAGTATATT
Downstream 100 bases:
>100_bases TGAAGTTGCCTTGGCGGACGAATTTATAAAGAGATATGAGAAGTTATAGAAAAAAAATAGCCATATCCAGTATGATTTAA AAGTACACAATATGTGGGTA
Product: Beta-glucosidase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MIIRQRAKPVIIGISGPELTDAERALFEKHNPLGVILFRRNIRKNDNGEQDKETLIKLIADIKEVLGANTIISIDQEGGR VKRLIAPTFYDAPAAQTFVDVQECKQNYINIGKELREVGINLDFAPVVDLIHEGADKIVGDRSFGSDLEVVVPLCLAAID GLQEEKVVACIKHIPGHGRAKVDSHIGLPIVDTSLKELEDTDFKVFKELAKYDNIKLAMTAHIIYKALDPENPATLSKKV KAYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECTGEFNKMSEVLGSVSEESIDKFSDLLMCRFGMNN QSPLVECKI
Sequences:
>Translated_329_residues MIIRQRAKPVIIGISGPELTDAERALFEKHNPLGVILFRRNIRKNDNGEQDKETLIKLIADIKEVLGANTIISIDQEGGR VKRLIAPTFYDAPAAQTFVDVQECKQNYINIGKELREVGINLDFAPVVDLIHEGADKIVGDRSFGSDLEVVVPLCLAAID GLQEEKVVACIKHIPGHGRAKVDSHIGLPIVDTSLKELEDTDFKVFKELAKYDNIKLAMTAHIIYKALDPENPATLSKKV KAYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECTGEFNKMSEVLGSVSEESIDKFSDLLMCRFGMNN QSPLVECKI >Mature_329_residues MIIRQRAKPVIIGISGPELTDAERALFEKHNPLGVILFRRNIRKNDNGEQDKETLIKLIADIKEVLGANTIISIDQEGGR VKRLIAPTFYDAPAAQTFVDVQECKQNYINIGKELREVGINLDFAPVVDLIHEGADKIVGDRSFGSDLEVVVPLCLAAID GLQEEKVVACIKHIPGHGRAKVDSHIGLPIVDTSLKELEDTDFKVFKELAKYDNIKLAMTAHIIYKALDPENPATLSKKV KAYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECTGEFNKMSEVLGSVSEESIDKFSDLLMCRFGMNN QSPLVECKI
Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=294, Percent_Identity=31.9727891156463, Blast_Score=140, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022956 - InterPro: IPR019800 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 36143; Mature: 36143
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIRQRAKPVIIGISGPELTDAERALFEKHNPLGVILFRRNIRKNDNGEQDKETLIKLIA CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH DIKEVLGANTIISIDQEGGRVKRLIAPTFYDAPAAQTFVDVQECKQNYINIGKELREVGI HHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC NLDFAPVVDLIHEGADKIVGDRSFGSDLEVVVPLCLAAIDGLQEEKVVACIKHIPGHGRA CCCHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC KVDSHIGLPIVDTSLKELEDTDFKVFKELAKYDNIKLAMTAHIIYKALDPENPATLSKKV CCCCCCCCCEECCHHHHHCCCHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCHHHHHHH KAYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECTGEFNKMSEVLGSV HHHHHHCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCC SEESIDKFSDLLMCRFGMNNQSPLVECKI CHHHHHHHHHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure MIIRQRAKPVIIGISGPELTDAERALFEKHNPLGVILFRRNIRKNDNGEQDKETLIKLIA CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH DIKEVLGANTIISIDQEGGRVKRLIAPTFYDAPAAQTFVDVQECKQNYINIGKELREVGI HHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC NLDFAPVVDLIHEGADKIVGDRSFGSDLEVVVPLCLAAIDGLQEEKVVACIKHIPGHGRA CCCHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC KVDSHIGLPIVDTSLKELEDTDFKVFKELAKYDNIKLAMTAHIIYKALDPENPATLSKKV CCCCCCCCCEECCHHHHHCCCHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCHHHHHHH KAYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECTGEFNKMSEVLGSV HHHHHHCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCC SEESIDKFSDLLMCRFGMNNQSPLVECKI CHHHHHHHHHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA