Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

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The map label for this gene is nagZ [H]

Identifier: 157826132

GI number: 157826132

Start: 987469

End: 988458

Strand: Reverse

Name: nagZ [H]

Synonym: A1C_05545

Alternate gene names: 157826132

Gene position: 988458-987469 (Counterclockwise)

Preceding gene: 157826133

Following gene: 157826131

Centisome position: 80.29

GC content: 36.57

Gene sequence:

>990_bases
ATGATAATAAGACAAAGAGCAAAACCGGTAATTATAGGCATATCCGGTCCTGAATTAACCGATGCTGAAAGAGCATTATT
TGAAAAGCATAATCCTTTAGGTGTGATTTTATTCCGTCGTAATATTAGAAAGAATGATAACGGTGAGCAGGATAAAGAGA
CTCTTATTAAGCTTATTGCAGATATAAAAGAAGTATTAGGAGCAAATACTATCATCTCTATAGATCAAGAGGGCGGTAGG
GTAAAAAGGCTCATAGCACCAACTTTTTATGACGCTCCGGCTGCTCAAACTTTCGTTGATGTGCAAGAGTGCAAACAAAA
CTATATCAATATAGGCAAAGAGTTAAGAGAAGTAGGTATTAATCTAGATTTTGCTCCGGTAGTGGATTTGATCCACGAAG
GAGCAGACAAGATAGTCGGCGATAGAAGTTTCGGCTCAGATCTGGAGGTAGTCGTGCCTTTATGTTTAGCTGCTATAGAT
GGATTACAAGAAGAGAAAGTCGTGGCTTGTATAAAACATATTCCTGGTCATGGTAGAGCTAAAGTGGATAGCCATATAGG
GTTACCTATTGTTGATACTAGCTTAAAAGAACTAGAGGATACAGACTTTAAAGTATTTAAGGAGTTAGCGAAGTACGATA
ATATTAAACTTGCTATGACTGCACATATAATTTATAAAGCTCTTGATCCTGAGAACCCTGCCACCCTATCCAAAAAAGTT
AAAGCCTATATTAAAAATAATATAGGCTTTAAAGGGCTTATTATTTCCGATGCAATAGATATGAAAGCTTTAAGCGGTAG
TATGGCAGATATTACCAAAGGAGTTTTAGATGCAGGCGTAGATATAGTGCTTGAATGTACCGGAGAATTTAACAAAATGT
CTGAAGTTCTAGGTAGTGTTTCGGAAGAGTCTATAGATAAATTTTCTGACCTATTAATGTGCCGATTTGGGATGAACAAT
CAATCGCCTTTAGTCGAATGTAAGATATAA

Upstream 100 bases:

>100_bases
CTTCAAATAAAAAAAATTCTTGCCGACTCCTCGATGGCTTGCGTATAGTACTTGTCATATAACGTTTTATAACGTTTTAA
AGACAAGAAAAGAGTATATT

Downstream 100 bases:

>100_bases
TGAAGTTGCCTTGGCGGACGAATTTATAAAGAGATATGAGAAGTTATAGAAAAAAAATAGCCATATCCAGTATGATTTAA
AAGTACACAATATGTGGGTA

Product: Beta-glucosidase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MIIRQRAKPVIIGISGPELTDAERALFEKHNPLGVILFRRNIRKNDNGEQDKETLIKLIADIKEVLGANTIISIDQEGGR
VKRLIAPTFYDAPAAQTFVDVQECKQNYINIGKELREVGINLDFAPVVDLIHEGADKIVGDRSFGSDLEVVVPLCLAAID
GLQEEKVVACIKHIPGHGRAKVDSHIGLPIVDTSLKELEDTDFKVFKELAKYDNIKLAMTAHIIYKALDPENPATLSKKV
KAYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECTGEFNKMSEVLGSVSEESIDKFSDLLMCRFGMNN
QSPLVECKI

Sequences:

>Translated_329_residues
MIIRQRAKPVIIGISGPELTDAERALFEKHNPLGVILFRRNIRKNDNGEQDKETLIKLIADIKEVLGANTIISIDQEGGR
VKRLIAPTFYDAPAAQTFVDVQECKQNYINIGKELREVGINLDFAPVVDLIHEGADKIVGDRSFGSDLEVVVPLCLAAID
GLQEEKVVACIKHIPGHGRAKVDSHIGLPIVDTSLKELEDTDFKVFKELAKYDNIKLAMTAHIIYKALDPENPATLSKKV
KAYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECTGEFNKMSEVLGSVSEESIDKFSDLLMCRFGMNN
QSPLVECKI
>Mature_329_residues
MIIRQRAKPVIIGISGPELTDAERALFEKHNPLGVILFRRNIRKNDNGEQDKETLIKLIADIKEVLGANTIISIDQEGGR
VKRLIAPTFYDAPAAQTFVDVQECKQNYINIGKELREVGINLDFAPVVDLIHEGADKIVGDRSFGSDLEVVVPLCLAAID
GLQEEKVVACIKHIPGHGRAKVDSHIGLPIVDTSLKELEDTDFKVFKELAKYDNIKLAMTAHIIYKALDPENPATLSKKV
KAYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECTGEFNKMSEVLGSVSEESIDKFSDLLMCRFGMNN
QSPLVECKI

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=294, Percent_Identity=31.9727891156463, Blast_Score=140, Evalue=8e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR019800
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 36143; Mature: 36143

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRQRAKPVIIGISGPELTDAERALFEKHNPLGVILFRRNIRKNDNGEQDKETLIKLIA
CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
DIKEVLGANTIISIDQEGGRVKRLIAPTFYDAPAAQTFVDVQECKQNYINIGKELREVGI
HHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NLDFAPVVDLIHEGADKIVGDRSFGSDLEVVVPLCLAAIDGLQEEKVVACIKHIPGHGRA
CCCHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
KVDSHIGLPIVDTSLKELEDTDFKVFKELAKYDNIKLAMTAHIIYKALDPENPATLSKKV
CCCCCCCCCEECCHHHHHCCCHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCHHHHHHH
KAYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECTGEFNKMSEVLGSV
HHHHHHCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCC
SEESIDKFSDLLMCRFGMNNQSPLVECKI
CHHHHHHHHHHHHHHCCCCCCCCEEEECC
>Mature Secondary Structure
MIIRQRAKPVIIGISGPELTDAERALFEKHNPLGVILFRRNIRKNDNGEQDKETLIKLIA
CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
DIKEVLGANTIISIDQEGGRVKRLIAPTFYDAPAAQTFVDVQECKQNYINIGKELREVGI
HHHHHHCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
NLDFAPVVDLIHEGADKIVGDRSFGSDLEVVVPLCLAAIDGLQEEKVVACIKHIPGHGRA
CCCHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
KVDSHIGLPIVDTSLKELEDTDFKVFKELAKYDNIKLAMTAHIIYKALDPENPATLSKKV
CCCCCCCCCEECCHHHHHCCCHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCHHHHHHH
KAYIKNNIGFKGLIISDAIDMKALSGSMADITKGVLDAGVDIVLECTGEFNKMSEVLGSV
HHHHHHCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCC
SEESIDKFSDLLMCRFGMNNQSPLVECKI
CHHHHHHHHHHHHHHCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA