| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826111
Identifier: 157826111
GI number: 157826111
Start: 962388
End: 962729
Strand: Reverse
Name: 157826111
Synonym: A1C_05420
Alternate gene names: NA
Gene position: 962729-962388 (Counterclockwise)
Preceding gene: 157826114
Following gene: 157826110
Centisome position: 78.2
GC content: 32.16
Gene sequence:
>342_bases GTGGCAATAAAGGGCGAAAAATTAACTAATGATGTGTTTTTTCAAAAATTTTACTATCATGATGCGGCAAGATTGACTGT AGCGATAGTACCCTTAATAATGTTTGGGTCTATTAAAGATTTAAACTTCTTAAGTCTTGCAACTTTAATAGATGTTTTCA CAACTGCTATATCGGATTTAAATGTTGGTAATGCAATAAGTAGTGTAGGTAAAAATATTGCTGAGAAAACTGCTACTACC ATTACTTGGCTTAATAAAATTGACTCAGGCACAAATGATGATACAGTTATTGATATTGAACCTACAGAAGAAGTACCATG TCTAGGTTCTATGGACATTTGA
Upstream 100 bases:
>100_bases TTTCATAATCCAGAATTAGAATTTTATGAAGATCCAATGTTTTATGCCTCCACTTCTGTTAAATTAATACGTCTTGCTTT TTGATTAGTATCAACATATT
Downstream 100 bases:
>100_bases TTAATTATGATTATTCTATTAAAAGTAGACAGAATCTAGTATAAAAAATTACAATATTACTAACTTCTTTTTTTATAGTA TTGATGCGTATTCAAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAIKGEKLTNDVFFQKFYYHDAARLTVAIVPLIMFGSIKDLNFLSLATLIDVFTTAISDLNVGNAISSVGKNIAEKTATT ITWLNKIDSGTNDDTVIDIEPTEEVPCLGSMDI
Sequences:
>Translated_113_residues MAIKGEKLTNDVFFQKFYYHDAARLTVAIVPLIMFGSIKDLNFLSLATLIDVFTTAISDLNVGNAISSVGKNIAEKTATT ITWLNKIDSGTNDDTVIDIEPTEEVPCLGSMDI >Mature_112_residues AIKGEKLTNDVFFQKFYYHDAARLTVAIVPLIMFGSIKDLNFLSLATLIDVFTTAISDLNVGNAISSVGKNIAEKTATTI TWLNKIDSGTNDDTVIDIEPTEEVPCLGSMDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12316; Mature: 12185
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKGEKLTNDVFFQKFYYHDAARLTVAIVPLIMFGSIKDLNFLSLATLIDVFTTAISDL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC NVGNAISSVGKNIAEKTATTITWLNKIDSGTNDDTVIDIEPTEEVPCLGSMDI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure AIKGEKLTNDVFFQKFYYHDAARLTVAIVPLIMFGSIKDLNFLSLATLIDVFTTAISDL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC NVGNAISSVGKNIAEKTATTITWLNKIDSGTNDDTVIDIEPTEEVPCLGSMDI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]