| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826109
Identifier: 157826109
GI number: 157826109
Start: 961311
End: 961763
Strand: Reverse
Name: 157826109
Synonym: A1C_05410
Alternate gene names: NA
Gene position: 961763-961311 (Counterclockwise)
Preceding gene: 157826110
Following gene: 157826108
Centisome position: 78.12
GC content: 29.8
Gene sequence:
>453_bases TTGCTGTTACGGATTTTAAAAAAAATTAATCAATATTATGAAGATATTGCCATACCTATAATTGGTTTCAAGTTTTCACG ACCTAAAACAGAGTTTATTAAAATTAATGATTCGAGGTTATTTATGTGTGATTATAATTGGGATAATACTCGCTCTGGTC TCAAATATAAAAAATTATATAAACTACTTGATAAACGTAATGATGTAGATATGTATGGTCCTAGAGCAGGTTTGTTACTG CTTAATTCATATAGAGGATTTATACCTTATGACGCTCAGTTATTTGTTTATACAATAAGAAAAAGTGGTATTGGTTTAGC ATTGCATTCAGAAGATCATATTATGGATAACTTTCCTTCTGTACAAGTTTTAGAACTTGTGAGTGCTTCAGCATTGGTAA TTGTTGACGCAATGACATGGGCAAAAGCAACTTTTGGTGATAATATACTATAA
Upstream 100 bases:
>100_bases ATTTTACATTTTCCTTGTCTGAGAAATAATGCTAAATATTTGATAGATATTGCTTTGGTTCCCTATTATTGTCTTAAACC TATTAAATCTTATGGATTAG
Downstream 100 bases:
>100_bases TATAGAAACTTTACACAAATCTCCTGAGGAAATATACTCTCAAATAAATCAGCATTTAGAATGGCTGAAGTCTCATCGTG AAGAAGCTTATGAAAAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MLLRILKKINQYYEDIAIPIIGFKFSRPKTEFIKINDSRLFMCDYNWDNTRSGLKYKKLYKLLDKRNDVDMYGPRAGLLL LNSYRGFIPYDAQLFVYTIRKSGIGLALHSEDHIMDNFPSVQVLELVSASALVIVDAMTWAKATFGDNIL
Sequences:
>Translated_150_residues MLLRILKKINQYYEDIAIPIIGFKFSRPKTEFIKINDSRLFMCDYNWDNTRSGLKYKKLYKLLDKRNDVDMYGPRAGLLL LNSYRGFIPYDAQLFVYTIRKSGIGLALHSEDHIMDNFPSVQVLELVSASALVIVDAMTWAKATFGDNIL >Mature_150_residues MLLRILKKINQYYEDIAIPIIGFKFSRPKTEFIKINDSRLFMCDYNWDNTRSGLKYKKLYKLLDKRNDVDMYGPRAGLLL LNSYRGFIPYDAQLFVYTIRKSGIGLALHSEDHIMDNFPSVQVLELVSASALVIVDAMTWAKATFGDNIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17352; Mature: 17352
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRILKKINQYYEDIAIPIIGFKFSRPKTEFIKINDSRLFMCDYNWDNTRSGLKYKKLY CHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHH KLLDKRNDVDMYGPRAGLLLLNSYRGFIPYDAQLFVYTIRKSGIGLALHSEDHIMDNFPS HHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCC VQVLELVSASALVIVDAMTWAKATFGDNIL HHHHHHHCCCEEEEEEHHHHHHHCCCCCCC >Mature Secondary Structure MLLRILKKINQYYEDIAIPIIGFKFSRPKTEFIKINDSRLFMCDYNWDNTRSGLKYKKLY CHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHH KLLDKRNDVDMYGPRAGLLLLNSYRGFIPYDAQLFVYTIRKSGIGLALHSEDHIMDNFPS HHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCC VQVLELVSASALVIVDAMTWAKATFGDNIL HHHHHHHCCCEEEEEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA