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The map label for this gene is scoA [H]

Identifier: 157825979

GI number: 157825979

Start: 834567

End: 834812

Strand: Direct

Name: scoA [H]

Synonym: A1C_04625

Alternate gene names: 157825979

Gene position: 834567-834812 (Clockwise)

Preceding gene: 157825978

Following gene: 157825981

Centisome position: 67.79

GC content: 30.89

Gene sequence:

>246_bases
TTGCTATTAACTAAATGCTTTAAAGCCGATAAAAGCGGCAACGTAATTTACAATAAAACTGCAAGAAACTTTAATGCAGT
CATGGCAGGAGCAGCAAAAACCACAATTTGTGAAGTAGAAGAAATAGTCAATATAGGAGAGCTAGAACCTGATAATATTC
ATACACCTAATATTTTCATACAGCGATTAATAGTAGGTAAGAAATATGAAAAACGTATTGAACAATTAACTGTTAGAGAA
AAATAA

Upstream 100 bases:

>100_bases
TATACTAAAACAGGTATAGGTACAATAGTTGAAGGAGGTAAAGAAACAAAGGAGTTTAATGGCGAAAAATATATAATGGA
AACAGCACTTCAAGCTGACA

Downstream 100 bases:

>100_bases
ATATGTCTTGTACTAAAGAACAAATGTACAAAATAACCGCAGAAGAGCTTAAAGATTGGTCATATGTCAACGTGGGTATA
GGTATCCCTACTCTTGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Succinyl CoA:3-oxoacid CoA-transferase; OXCT A [H]

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MLLTKCFKADKSGNVIYNKTARNFNAVMAGAAKTTICEVEEIVNIGELEPDNIHTPNIFIQRLIVGKKYEKRIEQLTVRE
K

Sequences:

>Translated_81_residues
MLLTKCFKADKSGNVIYNKTARNFNAVMAGAAKTTICEVEEIVNIGELEPDNIHTPNIFIQRLIVGKKYEKRIEQLTVRE
K
>Mature_81_residues
MLLTKCFKADKSGNVIYNKTARNFNAVMAGAAKTTICEVEEIVNIGELEPDNIHTPNIFIQRLIVGKKYEKRIEQLTVRE
K

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG1788

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=79, Percent_Identity=58.2278481012658, Blast_Score=104, Evalue=1e-23,
Organism=Homo sapiens, GI11545841, Length=76, Percent_Identity=55.2631578947368, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788551, Length=68, Percent_Identity=41.1764705882353, Blast_Score=61, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17531517, Length=73, Percent_Identity=46.5753424657534, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24655794, Length=78, Percent_Identity=55.1282051282051, Blast_Score=91, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21358325, Length=78, Percent_Identity=55.1282051282051, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012792
- InterPro:   IPR004165
- InterPro:   IPR004163 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 9210; Mature: 9210

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTKCFKADKSGNVIYNKTARNFNAVMAGAAKTTICEVEEIVNIGELEPDNIHTPNIFI
CCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH
QRLIVGKKYEKRIEQLTVREK
HHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLLTKCFKADKSGNVIYNKTARNFNAVMAGAAKTTICEVEEIVNIGELEPDNIHTPNIFI
CCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH
QRLIVGKKYEKRIEQLTVREK
HHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]