| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825972
Identifier: 157825972
GI number: 157825972
Start: 827351
End: 828097
Strand: Direct
Name: 157825972
Synonym: A1C_04590
Alternate gene names: NA
Gene position: 827351-828097 (Clockwise)
Preceding gene: 157825971
Following gene: 157825973
Centisome position: 67.21
GC content: 28.25
Gene sequence:
>747_bases ATGATAATAACAAAAAATAAATCAAATTATCAGGATTTGCTAAAAACCTTAGCTATTATAGCCATGAGCATTGATCATGT GGGTTTATATCTATATCCTGAATTAACGGTTATGCGAATTATAGGTCGCACGGCTATGCCGATATTTTGCTTTTTTGCCG GTTACAATTTTCATGATAAGCCAAAAACTAGAATAATAATATGCGGAGTTTTGCTACAAATATATACTACTGTACTATTT AAACAGTTTTTTACTACACATATTCTAATCTCTATCTATCTAGGGCAATGGTATATTTATTATTTTCGTAATTCTTTAAC TCGCTTTTTCTATAGTGGTTATTGCAATGTAGTGATAATGGTAATATTGTGGTATATTAGCTGGGCTTTGATTGATTACG GGACTCTTGTGATTGCTATAATGATACTTGGATTTATTGCAAAACATGAGCAGATAAATTTCAAACTTTGCGGTTTTATA GCAATTTTTGCTTCCCTAGTGCATTCAACTCTTTTTACTCTTGCGATTCCCTTTAGTGATTTTAATTTTTCAAATACTGA CTTAATTTTAAACCTTACTTTTTTAACAATTACTTACATATTAATGATCTCAAGAGATTACTCACAAAAAATACCAATAA ATCTCAAATGGATAAGTCGTAATGTTATATATATCTATTGTATACAAATTATAATCTTACAATTCATATTCATTTATAAA TACACATATGGTTTTAAAAATTGGTAG
Upstream 100 bases:
>100_bases TCGGAATATTTCCTGATTAAGGTCTGTATGCTAGGTAGTACAATTGCAGTGGGAATGGGAACATTTTTCGGCACAGCATA TTTATTAAAAGTGGTCAATT
Downstream 100 bases:
>100_bases ATAAACATTAATAATTAGTGACAGCGTAATTTAGTTAATATTAATATATTTAAATAAATTGATCATTAAATATATGAATA TAATAGATCGCTTAATTTTG
Product: F pilin acetylation protein TraX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MIITKNKSNYQDLLKTLAIIAMSIDHVGLYLYPELTVMRIIGRTAMPIFCFFAGYNFHDKPKTRIIICGVLLQIYTTVLF KQFFTTHILISIYLGQWYIYYFRNSLTRFFYSGYCNVVIMVILWYISWALIDYGTLVIAIMILGFIAKHEQINFKLCGFI AIFASLVHSTLFTLAIPFSDFNFSNTDLILNLTFLTITYILMISRDYSQKIPINLKWISRNVIYIYCIQIIILQFIFIYK YTYGFKNW
Sequences:
>Translated_248_residues MIITKNKSNYQDLLKTLAIIAMSIDHVGLYLYPELTVMRIIGRTAMPIFCFFAGYNFHDKPKTRIIICGVLLQIYTTVLF KQFFTTHILISIYLGQWYIYYFRNSLTRFFYSGYCNVVIMVILWYISWALIDYGTLVIAIMILGFIAKHEQINFKLCGFI AIFASLVHSTLFTLAIPFSDFNFSNTDLILNLTFLTITYILMISRDYSQKIPINLKWISRNVIYIYCIQIIILQFIFIYK YTYGFKNW >Mature_248_residues MIITKNKSNYQDLLKTLAIIAMSIDHVGLYLYPELTVMRIIGRTAMPIFCFFAGYNFHDKPKTRIIICGVLLQIYTTVLF KQFFTTHILISIYLGQWYIYYFRNSLTRFFYSGYCNVVIMVILWYISWALIDYGTLVIAIMILGFIAKHEQINFKLCGFI AIFASLVHSTLFTLAIPFSDFNFSNTDLILNLTFLTITYILMISRDYSQKIPINLKWISRNVIYIYCIQIIILQFIFIYK YTYGFKNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008875 [H]
Pfam domain/function: PF05857 TraX [H]
EC number: NA
Molecular weight: Translated: 29291; Mature: 29291
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITKNKSNYQDLLKTLAIIAMSIDHVGLYLYPELTVMRIIGRTAMPIFCFFAGYNFHDK CEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC PKTRIIICGVLLQIYTTVLFKQFFTTHILISIYLGQWYIYYFRNSLTRFFYSGYCNVVIM CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VILWYISWALIDYGTLVIAIMILGFIAKHEQINFKLCGFIAIFASLVHSTLFTLAIPFSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC FNFSNTDLILNLTFLTITYILMISRDYSQKIPINLKWISRNVIYIYCIQIIILQFIFIYK CCCCCCHHEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH YTYGFKNW HHCCCCCC >Mature Secondary Structure MIITKNKSNYQDLLKTLAIIAMSIDHVGLYLYPELTVMRIIGRTAMPIFCFFAGYNFHDK CEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC PKTRIIICGVLLQIYTTVLFKQFFTTHILISIYLGQWYIYYFRNSLTRFFYSGYCNVVIM CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VILWYISWALIDYGTLVIAIMILGFIAKHEQINFKLCGFIAIFASLVHSTLFTLAIPFSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCC FNFSNTDLILNLTFLTITYILMISRDYSQKIPINLKWISRNVIYIYCIQIIILQFIFIYK CCCCCCHHEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH YTYGFKNW HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]