| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825934
Identifier: 157825934
GI number: 157825934
Start: 786580
End: 787578
Strand: Reverse
Name: 157825934
Synonym: A1C_04370
Alternate gene names: NA
Gene position: 787578-786580 (Counterclockwise)
Preceding gene: 157825935
Following gene: 157825931
Centisome position: 63.98
GC content: 30.63
Gene sequence:
>999_bases ATGTCTAAGAAAAAGCAGGACGATCAAATAATAAAAGAATTAGAAGCAAGATTAGCAAAACTTAAAGGCACTCCTCTAAC ACTTGAAGAATTAGAAGAAAGATTTGCAAAGCTCCAAGATAGACCTTATATCCCAGCAAAAAAATCCGGTTATGACTCTG GTTATGGATCCGATGATGAGGTAGATAAGCTAGTTGAGAAGATACAATCCGCAGTTAAAATAGAACAAAAAAGTAAAACT CTTAATGCTCAAAAAGACCAAGCAATACGTGATAGGCTAGATAAATTAAGAGAAGATACTACTGTAACACGAAAAAAGAC ATTTACAGCTCTTTCTTTTAATGATACTAAATCAATAATTACCGATACTATAGATGCTCATGCAGATATAGTTAGTTCAT ATGCTACTCGATATACTGATTTAGAAGAAAAAAAAGCATTATTTAATTTAGCTAATAATCTAACTGAAGCTAGAGATATT ATTAGGGATACACCTACTATATCCAAAGAATATGAGCCTAAAATATTAGATGTTATTGCTAAAGCAATCGGTGAAATTTA TGAAGGAATAAAGAAAATAGCTGCGCCTGCAGTTAATATTATAAAAGAAATAGGCAGTAGTCTTGTTAATTCGATTAAAT CACTTTCTCAAAAATCTTCCGAACAACAAATAAAAGAATCTAAAATAAAATTAAAGAAGTTATATAAAACATATGTTGAT TTGAAAGGAGTAACGCCAAAGATAAAAGAAGAGTTTCTTAAAAAGCATTGTGAGTACATTGATCAGTTACAAACTCCTCA GGAAATATTTGTGGAAACTGCCAAAATTACTAAATCTATAAGGATAGCCGGAAGACAAAAGATCAATAATCTTAAACAAC AACGAATTATTAATAGAATGCAGAAGCAAATTCCTACTGGTTGCATGAATAATAATGCATTTACACCGTCTAATACTCCT ATTAATAAAGGAAAATCTTTGAAGAGCCATCGAAGGTAA
Upstream 100 bases:
>100_bases TGATATTGTTTAAATGGATGTTATCTTTCATATTAAAAAATACTTTATTTTAGTTAGTAGTTTGTGTTATTAATAATTGA GAATTATTACGGAGGTATAT
Downstream 100 bases:
>100_bases ATGCTGTTTCATTCCTGCATAAGCGGGGCGTTGTTGCATGGATACCGAGTGGTCATTGAGAGCAGGCGTTGTGGCGTACC TGTAAAACCTACAGCGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSKKKQDDQIIKELEARLAKLKGTPLTLEELEERFAKLQDRPYIPAKKSGYDSGYGSDDEVDKLVEKIQSAVKIEQKSKT LNAQKDQAIRDRLDKLREDTTVTRKKTFTALSFNDTKSIITDTIDAHADIVSSYATRYTDLEEKKALFNLANNLTEARDI IRDTPTISKEYEPKILDVIAKAIGEIYEGIKKIAAPAVNIIKEIGSSLVNSIKSLSQKSSEQQIKESKIKLKKLYKTYVD LKGVTPKIKEEFLKKHCEYIDQLQTPQEIFVETAKITKSIRIAGRQKINNLKQQRIINRMQKQIPTGCMNNNAFTPSNTP INKGKSLKSHRR
Sequences:
>Translated_332_residues MSKKKQDDQIIKELEARLAKLKGTPLTLEELEERFAKLQDRPYIPAKKSGYDSGYGSDDEVDKLVEKIQSAVKIEQKSKT LNAQKDQAIRDRLDKLREDTTVTRKKTFTALSFNDTKSIITDTIDAHADIVSSYATRYTDLEEKKALFNLANNLTEARDI IRDTPTISKEYEPKILDVIAKAIGEIYEGIKKIAAPAVNIIKEIGSSLVNSIKSLSQKSSEQQIKESKIKLKKLYKTYVD LKGVTPKIKEEFLKKHCEYIDQLQTPQEIFVETAKITKSIRIAGRQKINNLKQQRIINRMQKQIPTGCMNNNAFTPSNTP INKGKSLKSHRR >Mature_331_residues SKKKQDDQIIKELEARLAKLKGTPLTLEELEERFAKLQDRPYIPAKKSGYDSGYGSDDEVDKLVEKIQSAVKIEQKSKTL NAQKDQAIRDRLDKLREDTTVTRKKTFTALSFNDTKSIITDTIDAHADIVSSYATRYTDLEEKKALFNLANNLTEARDII RDTPTISKEYEPKILDVIAKAIGEIYEGIKKIAAPAVNIIKEIGSSLVNSIKSLSQKSSEQQIKESKIKLKKLYKTYVDL KGVTPKIKEEFLKKHCEYIDQLQTPQEIFVETAKITKSIRIAGRQKINNLKQQRIINRMQKQIPTGCMNNNAFTPSNTPI NKGKSLKSHRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37801; Mature: 37670
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKKQDDQIIKELEARLAKLKGTPLTLEELEERFAKLQDRPYIPAKKSGYDSGYGSDDE CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH VDKLVEKIQSAVKIEQKSKTLNAQKDQAIRDRLDKLREDTTVTRKKTFTALSFNDTKSII HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHH TDTIDAHADIVSSYATRYTDLEEKKALFNLANNLTEARDIIRDTPTISKEYEPKILDVIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH KAIGEIYEGIKKIAAPAVNIIKEIGSSLVNSIKSLSQKSSEQQIKESKIKLKKLYKTYVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKGVTPKIKEEFLKKHCEYIDQLQTPQEIFVETAKITKSIRIAGRQKINNLKQQRIINRM HCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKQIPTGCMNNNAFTPSNTPINKGKSLKSHRR HHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure SKKKQDDQIIKELEARLAKLKGTPLTLEELEERFAKLQDRPYIPAKKSGYDSGYGSDDE CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH VDKLVEKIQSAVKIEQKSKTLNAQKDQAIRDRLDKLREDTTVTRKKTFTALSFNDTKSII HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHH TDTIDAHADIVSSYATRYTDLEEKKALFNLANNLTEARDIIRDTPTISKEYEPKILDVIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH KAIGEIYEGIKKIAAPAVNIIKEIGSSLVNSIKSLSQKSSEQQIKESKIKLKKLYKTYVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKGVTPKIKEEFLKKHCEYIDQLQTPQEIFVETAKITKSIRIAGRQKINNLKQQRIINRM HCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKQIPTGCMNNNAFTPSNTPINKGKSLKSHRR HHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA