| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825892
Identifier: 157825892
GI number: 157825892
Start: 749699
End: 750520
Strand: Reverse
Name: 157825892
Synonym: A1C_04155
Alternate gene names: NA
Gene position: 750520-749699 (Counterclockwise)
Preceding gene: 157825893
Following gene: 157825891
Centisome position: 60.97
GC content: 33.7
Gene sequence:
>822_bases TTGGTTTATCTTATTGTAACTCAAGTTTATTTTAGCGTTGGCGGTATGGTTTGGGAATTGTGCCAAATTTTCCTATGTCA TTCCCGCGGAAGCGGGAATGACATAGAAGAGTGTAGGGATGATGTTAACACTATACTACTCCTATTGTTATCCTTTCTTT TTTTTTCAAATCCGGCTATTGCCGATCCTGAAATAGCTGAATCCTTTAAATGTTCAAAGCTTTTTCCTTACTTTGAAAAA AAATTTAATATCCCATCTAATACGTTGCATTCAATAGCTTTAAAAGAATCGGGAAAAAAACATACAACCCATAAAATTAG AGTAGTATGGCCTTGGACGGTAAACGTTGAAGGAAAAGGCTATTATTTTAACACAAAAAGAGAAGCCGTAAGTTTTGTTA GAATAGAGCTTATAAGAGGGCGAGAGAGTATTGATGTCGGATGTATGCAGATTAACTTAAGACATCATTTAGGAGCGTTT AATTCCCTTGAACAGGCATTTGATCCAAATAATAACGTTCATTATGGAGCAAAATTCTTGCGTTCAAAATATGATCAGCT AGGGAGTTGGCACAAAGCTATAGCACATTACCACTCAGCCACTCATTCTTTAGGGTTTAAATATAAGCAAGATGTAGTTA AAATAGCAAGTAACATGGCTCTTTATAAAGCCTCCTTACGTAGTTATCTGAATAATAATGAAATGGCTTTAGAAGATACA ATACCGATAAATAATAATAAAGTTCACAAAAAATCACTTTTTAGTAGCAATAAAAGATACAGAAGTAGTATTATGATACC GGTTCCTGCTAAAATTAATTAA
Upstream 100 bases:
>100_bases GGTATTACTAAAGATAATTTTGATGCTAATGATTTATAAGTAATCTTGTTTGTTTCTGATCTGATAACTTCCCTTGCTTC ATAAGATAAGTTATGGTAGA
Downstream 100 bases:
>100_bases TTCTATGAATATACTCGTTGAACTTAAAAAATTGGCTGCGTCATCCGACAAGTTCTGCGGTGTTCAAATATTAAGTATAC GCTCCGCTCGTCGCCTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglycosylase Slt Family; Lytic Transglycosylase; Transglycosylase; Soluble Lytic Murein Transglycosylase; Transglycosylase SLT Domain-Containing Protein; VirB1 Protein; Type IV Secretory Pathway Lytic Transglycosylase; Transglycosylase SLT Family Protein; Lytic Murein Transglycosylase Family Protein; Slt Family Transglycosylase; Transglycosylase SLT Domain
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MVYLIVTQVYFSVGGMVWELCQIFLCHSRGSGNDIEECRDDVNTILLLLLSFLFFSNPAIADPEIAESFKCSKLFPYFEK KFNIPSNTLHSIALKESGKKHTTHKIRVVWPWTVNVEGKGYYFNTKREAVSFVRIELIRGRESIDVGCMQINLRHHLGAF NSLEQAFDPNNNVHYGAKFLRSKYDQLGSWHKAIAHYHSATHSLGFKYKQDVVKIASNMALYKASLRSYLNNNEMALEDT IPINNNKVHKKSLFSSNKRYRSSIMIPVPAKIN
Sequences:
>Translated_273_residues MVYLIVTQVYFSVGGMVWELCQIFLCHSRGSGNDIEECRDDVNTILLLLLSFLFFSNPAIADPEIAESFKCSKLFPYFEK KFNIPSNTLHSIALKESGKKHTTHKIRVVWPWTVNVEGKGYYFNTKREAVSFVRIELIRGRESIDVGCMQINLRHHLGAF NSLEQAFDPNNNVHYGAKFLRSKYDQLGSWHKAIAHYHSATHSLGFKYKQDVVKIASNMALYKASLRSYLNNNEMALEDT IPINNNKVHKKSLFSSNKRYRSSIMIPVPAKIN >Mature_273_residues MVYLIVTQVYFSVGGMVWELCQIFLCHSRGSGNDIEECRDDVNTILLLLLSFLFFSNPAIADPEIAESFKCSKLFPYFEK KFNIPSNTLHSIALKESGKKHTTHKIRVVWPWTVNVEGKGYYFNTKREAVSFVRIELIRGRESIDVGCMQINLRHHLGAF NSLEQAFDPNNNVHYGAKFLRSKYDQLGSWHKAIAHYHSATHSLGFKYKQDVVKIASNMALYKASLRSYLNNNEMALEDT IPINNNKVHKKSLFSSNKRYRSSIMIPVPAKIN
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31330; Mature: 31330
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYLIVTQVYFSVGGMVWELCQIFLCHSRGSGNDIEECRDDVNTILLLLLSFLFFSNPAI CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC ADPEIAESFKCSKLFPYFEKKFNIPSNTLHSIALKESGKKHTTHKIRVVWPWTVNVEGKG CCCHHHHHCCHHHHCHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCC YYFNTKREAVSFVRIELIRGRESIDVGCMQINLRHHLGAFNSLEQAFDPNNNVHYGAKFL EEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCHHHHHHHHCCCCCCCHHHHHHH RSKYDQLGSWHKAIAHYHSATHSLGFKYKQDVVKIASNMALYKASLRSYLNNNEMALEDT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC IPINNNKVHKKSLFSSNKRYRSSIMIPVPAKIN CCCCCCCCHHHHHHHCCCHHHCEEEEECCCCCC >Mature Secondary Structure MVYLIVTQVYFSVGGMVWELCQIFLCHSRGSGNDIEECRDDVNTILLLLLSFLFFSNPAI CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC ADPEIAESFKCSKLFPYFEKKFNIPSNTLHSIALKESGKKHTTHKIRVVWPWTVNVEGKG CCCHHHHHCCHHHHCHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCC YYFNTKREAVSFVRIELIRGRESIDVGCMQINLRHHLGAFNSLEQAFDPNNNVHYGAKFL EEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCHHHHHHHHCCCCCCCHHHHHHH RSKYDQLGSWHKAIAHYHSATHSLGFKYKQDVVKIASNMALYKASLRSYLNNNEMALEDT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC IPINNNKVHKKSLFSSNKRYRSSIMIPVPAKIN CCCCCCCCHHHHHHHCCCHHHCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA