Click here to switch to the map view.

The map label for this gene is cyaY

Identifier: 157825568

GI number: 157825568

Start: 439581

End: 439886

Strand: Direct

Name: cyaY

Synonym: A1C_02395

Alternate gene names: 157825568

Gene position: 439581-439886 (Clockwise)

Preceding gene: 157825567

Following gene: 157825569

Centisome position: 35.71

GC content: 31.05

Gene sequence:

>306_bases
ATGAATAATACAGAATTTAGTAAAATAGCTGACATAACAATTGCATATATAACAGACACGATAGAAGAGCAAGACAAAGA
AGCAAGTATAGATGTAGATTTACAAGGTGATATATTAAATCTTGATACTGATAAGGGTATATATGTAATAAATAAACAAA
GTGCAGCCAAAGAAATTTGGTTATCGTCGCCGGTGAGTGGTCCTTGTCACTTTTTTTATGAACAAGGAAAATGGAAAAAT
AGAGTAGGGCTTGAGTTGATGGCTATTTTGACTGAAGAACTTGATATTGATTTTAATAATGTATGA

Upstream 100 bases:

>100_bases
TATAGAAAAAGTTTGATTAAAATGCCTGAGCCGGAAATTGATCTTGACAAATAGATATACTTGTTTATCACAACATGTAT
TAATTAGATAAATATATATT

Downstream 100 bases:

>100_bases
AAGATTTTGAAACTACCGATAGTGCTGCAAAAATTTATGATTTAATAATAAAAAATGCCCCTGATGTTGCATCTATATTT
ATTGATGTTGACGATACTAT

Product: frataxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MNNTEFSKIADITIAYITDTIEEQDKEASIDVDLQGDILNLDTDKGIYVINKQSAAKEIWLSSPVSGPCHFFYEQGKWKN
RVGLELMAILTEELDIDFNNV

Sequences:

>Translated_101_residues
MNNTEFSKIADITIAYITDTIEEQDKEASIDVDLQGDILNLDTDKGIYVINKQSAAKEIWLSSPVSGPCHFFYEQGKWKN
RVGLELMAILTEELDIDFNNV
>Mature_101_residues
MNNTEFSKIADITIAYITDTIEEQDKEASIDVDLQGDILNLDTDKGIYVINKQSAAKEIWLSSPVSGPCHFFYEQGKWKN
RVGLELMAILTEELDIDFNNV

Specific function: Unknown

COG id: COG1965

COG function: function code P; Protein implicated in iron transport, frataxin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frataxin family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYAY_RICAH (A8GN05)

Other databases:

- EMBL:   CP000847
- RefSeq:   YP_001493288.1
- ProteinModelPortal:   A8GN05
- SMR:   A8GN05
- GeneID:   5645794
- GenomeReviews:   CP000847_GR
- KEGG:   rak:A1C_02395
- NMPDR:   fig|293614.3.peg.446
- eggNOG:   COG1965
- HOGENOM:   HBG687517
- OMA:   ILYITIS
- ProtClustDB:   PRK01379
- BioCyc:   RAKA293614:A1C_02395-MONOMER
- HAMAP:   MF_00142
- InterPro:   IPR002908
- InterPro:   IPR020895
- Gene3D:   G3DSA:3.30.920.10
- TIGRFAMs:   TIGR03421

Pfam domain/function: PF01491 Frataxin_Cyay; SSF55387 Frataxin_like

EC number: NA

Molecular weight: Translated: 11443; Mature: 11443

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS01344 FRATAXIN_1; PS50810 FRATAXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTEFSKIADITIAYITDTIEEQDKEASIDVDLQGDILNLDTDKGIYVINKQSAAKEIW
CCCCCCHHHHHEEEEEEECCHHCCCCCCEEEEEECCCEEEECCCCCEEEEECCCCCCEEE
LSSPVSGPCHFFYEQGKWKNRVGLELMAILTEELDIDFNNV
ECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCEECCC
>Mature Secondary Structure
MNNTEFSKIADITIAYITDTIEEQDKEASIDVDLQGDILNLDTDKGIYVINKQSAAKEIW
CCCCCCHHHHHEEEEEEECCHHCCCCCCEEEEEECCCEEEECCCCCEEEEECCCCCCEEE
LSSPVSGPCHFFYEQGKWKNRVGLELMAILTEELDIDFNNV
ECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA