| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825497
Identifier: 157825497
GI number: 157825497
Start: 373019
End: 373216
Strand: Direct
Name: 157825497
Synonym: A1C_01990
Alternate gene names: NA
Gene position: 373019-373216 (Clockwise)
Preceding gene: 157825495
Following gene: 157825503
Centisome position: 30.3
GC content: 31.82
Gene sequence:
>198_bases TTGCAAGAATTTACTTATTTGAGAAAGCAGTATTGGGGCAATCATTTTTGGGCTAGAGGTTATATGGCAGTTAATTTAGG TAATATTACTGATGAAATGATACAGCAGTATATTGATGAGCAAGAAGGTGAAACTATTAATGATGACCTATTTCTAATCG ATTACACTTCTATTTATAACATCTCAGCTTATAGCTGA
Upstream 100 bases:
>100_bases TATAAATTCTTTATACACAATTAAAGTGTAAAGGAATGTATACTATTAAAATAAAAGTCAATTTGTGCAGTATTGAAAAT GCAGTAGCTCAAGAATATTA
Downstream 100 bases:
>100_bases GAGTTGTTTAGTTTATGTTATCAATATAATTGAACTAGTTTAAAGTGGTATGTCCGTGTACCTGAGCATTCATCACAAGT CCAAAGCCTATTAGTATGGA
Product: transposase IS200-family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MQEFTYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYS
Sequences:
>Translated_65_residues MQEFTYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYS >Mature_65_residues MQEFTYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYS
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7829; Mature: 7829
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEFTYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYN CCHHHHHHHHHCCCCEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEE ISAYS EEECC >Mature Secondary Structure MQEFTYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYN CCHHHHHHHHHCCCCEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEE ISAYS EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA