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The map label for this gene is petA [H]

Identifier: 157825488

GI number: 157825488

Start: 363728

End: 364261

Strand: Direct

Name: petA [H]

Synonym: A1C_01945

Alternate gene names: 157825488

Gene position: 363728-364261 (Clockwise)

Preceding gene: 157825487

Following gene: 157825489

Centisome position: 29.55

GC content: 41.76

Gene sequence:

>534_bases
ATGTCGGATACTGAAGATAATACAAACAAACAAACAACACGTCGTGATTTTATGGTTCTAACTGCTAGTAGTGTTGCAGC
AGTTGGGGCTGTTTGTACACTTTGGCCTCTAATGGACTCCTTAAACCCTTCCGCAGACGTGCTTGCTTTATCATCAATTG
AGGTTGATCTATCAAATATTGCGGTAGGGCAAACAGTTACTGTTAAATGGCAAGGTAAACCGGTTTTTATCACTAACCGT
ACTCCTGATAAAATAGCCGAAGCAAGAGCTGTAAAGATGTCGGAGCTTATTGATCCTGAAACAGATGAAGCACGTGTGAA
AGCAGGTCATGATAATTGGCTTGTGACGATTGGGATCTGTACTCATCTAGGTTGTGTGCCGCTTGCTGATCAAGGTGAAT
ATGATGGATGGTTCTGTCCGTGTCATGGTTCACAATATGATTCTTCAGGTAGGGTTAGAAGAGGTCCTGCTCCTTTAAAT
TTAGCGGTGCCGCCTTATAGTTTTATTAGCGATAAAAAAATTAGAATCGGGTAG

Upstream 100 bases:

>100_bases
TATAATAAATCCTTATGAAGAACTAGAAAATCCAAATAATCTTAATAATACCCAAAGTGGTAGTAATAATAATCGTTAAT
TTATGTCACTTTAATATTAT

Downstream 100 bases:

>100_bases
TTATTTATGAATGAAGATATTACCCCTAAAAAGCCTAATGCTACTAGAGTTCTTTCAAAATTAGCTTATAGAGGAGCATT
TGAAGGAAACACAGAACACG

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSDTEDNTNKQTTRRDFMVLTASSVAAVGAVCTLWPLMDSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNR
TPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLGCVPLADQGEYDGWFCPCHGSQYDSSGRVRRGPAPLN
LAVPPYSFISDKKIRIG

Sequences:

>Translated_177_residues
MSDTEDNTNKQTTRRDFMVLTASSVAAVGAVCTLWPLMDSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNR
TPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLGCVPLADQGEYDGWFCPCHGSQYDSSGRVRRGPAPLN
LAVPPYSFISDKKIRIG
>Mature_176_residues
SDTEDNTNKQTTRRDFMVLTASSVAAVGAVCTLWPLMDSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRT
PDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLGCVPLADQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNL
AVPPYSFISDKKIRIG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=181, Percent_Identity=44.7513812154696, Blast_Score=170, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI17540418, Length=156, Percent_Identity=50.6410256410256, Blast_Score=167, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6320811, Length=169, Percent_Identity=51.4792899408284, Blast_Score=190, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24580896, Length=141, Percent_Identity=51.7730496453901, Blast_Score=162, Evalue=8e-41,
Organism=Drosophila melanogaster, GI17864350, Length=109, Percent_Identity=36.697247706422, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 19220; Mature: 19089

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTEDNTNKQTTRRDFMVLTASSVAAVGAVCTLWPLMDSLNPSADVLALSSIEVDLSNI
CCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHE
AVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGIC
EECCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEH
THLGCVPLADQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYSFISDKKIRIG
HCCCCEECCCCCCCCCEEEECCCCCCCCCCCEEECCCCEEEECCCHHHCCCCEEECC
>Mature Secondary Structure 
SDTEDNTNKQTTRRDFMVLTASSVAAVGAVCTLWPLMDSLNPSADVLALSSIEVDLSNI
CCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHE
AVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGIC
EECCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEH
THLGCVPLADQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYSFISDKKIRIG
HCCCCEECCCCCCCCCEEEECCCCCCCCCCCEEECCCCEEEECCCHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA