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The map label for this gene is efp [H]

Identifier: 157825449

GI number: 157825449

Start: 328588

End: 329154

Strand: Direct

Name: efp [H]

Synonym: A1C_01750

Alternate gene names: 157825449

Gene position: 328588-329154 (Clockwise)

Preceding gene: 157825446

Following gene: 157825450

Centisome position: 26.69

GC content: 31.04

Gene sequence:

>567_bases
ATGAAAATTTCAGCAAATTCAATTAGAACAGGTAACATATTAGTTTGTAATAATGATTTATGGGTTGTAAGCAAAACACC
GGAACATACGCAACCTGGAAAAGGTGGAGCTTATGTACAAGTTGAGATGAAAAATTTAAAAACAGGTATAAAGCGTAACG
ATAGATTCAGTTCTTCTGATTATTTGGAAAAAGCCGAACTTGAACAAAAAGACTATCAATTTTTATATTTTGAAGGTAAT
GATTTAATATTGATGGACACCAAACATTTTGATCAAATAAATGTCCCCAAGGGAATTTTAGAAGAAAAATTACCTTTCTT
AACTGAAAATATGATTGTTAAAGTCGAATTTTATAATGAAAAGCCTTTAAATATTGAGCTTCCTCCAACTGTTATACTTG
AAATTAGTGAAACTGATCCGGTAATAAAAGGAGCAACCGCTACCGCTTCTTATAAACCGGCAGTTTTAGAAAACGGTATT
AAAGTTAAGGTACCGCAATATTTAGCAATAGGAGAAAAAATTGTTGTTAAAACTGATGATATAACGTATGTCGAGCGAGC
TAAATAA

Upstream 100 bases:

>100_bases
CATCTACTACTAATATTGTGGTCATAAGATTAAATTCTTGTTTTTGAATGAAATAATTTGTATATTTATACTTTAATTTT
AAGTCTCAAATGTATAATAT

Downstream 100 bases:

>100_bases
ATTTCCATTATGCAACCTATAACTAATTTATTAATTCATGCCCTGCGTAAAGCAGTTAAGTTTTTGCATAGAGATTTTTT
AGAACTTGAAATGCTGCAGA

Product: elongation factor P

Products: NA

Alternate protein names: EF-P [H]

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKISANSIRTGNILVCNNDLWVVSKTPEHTQPGKGGAYVQVEMKNLKTGIKRNDRFSSSDYLEKAELEQKDYQFLYFEGN
DLILMDTKHFDQINVPKGILEEKLPFLTENMIVKVEFYNEKPLNIELPPTVILEISETDPVIKGATATASYKPAVLENGI
KVKVPQYLAIGEKIVVKTDDITYVERAK

Sequences:

>Translated_188_residues
MKISANSIRTGNILVCNNDLWVVSKTPEHTQPGKGGAYVQVEMKNLKTGIKRNDRFSSSDYLEKAELEQKDYQFLYFEGN
DLILMDTKHFDQINVPKGILEEKLPFLTENMIVKVEFYNEKPLNIELPPTVILEISETDPVIKGATATASYKPAVLENGI
KVKVPQYLAIGEKIVVKTDDITYVERAK
>Mature_188_residues
MKISANSIRTGNILVCNNDLWVVSKTPEHTQPGKGGAYVQVEMKNLKTGIKRNDRFSSSDYLEKAELEQKDYQFLYFEGN
DLILMDTKHFDQINVPKGILEEKLPFLTENMIVKVEFYNEKPLNIELPPTVILEISETDPVIKGATATASYKPAVLENGI
KVKVPQYLAIGEKIVVKTDDITYVERAK

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI87082061, Length=186, Percent_Identity=34.4086021505376, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1790590, Length=184, Percent_Identity=32.6086956521739, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 21266; Mature: 21266

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISANSIRTGNILVCNNDLWVVSKTPEHTQPGKGGAYVQVEMKNLKTGIKRNDRFSSSD
CEECCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCC
YLEKAELEQKDYQFLYFEGNDLILMDTKHFDQINVPKGILEEKLPFLTENMIVKVEFYNE
HHHHHHCCCCCEEEEEEECCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEECC
KPLNIELPPTVILEISETDPVIKGATATASYKPAVLENGIKVKVPQYLAIGEKIVVKTDD
CCCEEECCCEEEEEECCCCCEEECCCCCCCCCCHHHCCCEEEECCCEEECCCEEEEEECC
ITYVERAK
EEEEEECC
>Mature Secondary Structure
MKISANSIRTGNILVCNNDLWVVSKTPEHTQPGKGGAYVQVEMKNLKTGIKRNDRFSSSD
CEECCCCCCCCCEEEECCCEEEEECCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCCCC
YLEKAELEQKDYQFLYFEGNDLILMDTKHFDQINVPKGILEEKLPFLTENMIVKVEFYNE
HHHHHHCCCCCEEEEEEECCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEECC
KPLNIELPPTVILEISETDPVIKGATATASYKPAVLENGIKVKVPQYLAIGEKIVVKTDD
CCCEEECCCEEEEEECCCCCEEECCCCCCCCCCHHHCCCEEEECCCEEECCCEEEEEECC
ITYVERAK
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA