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The map label for this gene is 157825278

Identifier: 157825278

GI number: 157825278

Start: 145126

End: 148056

Strand: Direct

Name: 157825278

Synonym: A1C_00800

Alternate gene names: NA

Gene position: 145126-148056 (Clockwise)

Preceding gene: 157825277

Following gene: 157825279

Centisome position: 11.79

GC content: 34.77

Gene sequence:

>2931_bases
ATGCAGAGTAACTTATTAAAAGTTTTCGGAGTACTTGCTATAGTCGCAACGTTAGTTTGCTTTATTTTTGCAGTACTTGG
TATGATAGGAGCAGTAAAAGTCGGTGACGGTTGCTACATGAGATATGCTCCGGACGGTAAAGGAGGTTCAGATTCAATAA
CGGGTACTATAACTCTTAATGCTAATGCTAATTATGTAAATACTTCTAAGATATTGCCCGACGGTACGACTCAGCTTATT
CCTGATCCCAATCATTATGGTGAATGGTTAAATACTCAGGTACTGGTAGAAAAAAGCCAACCGGTGAATTTACAAGTGGT
CGGTCAGGTTAGTTTATGTTTAGCTTATGTACCAAAAGATAATTTACAATTTACTGAAAGTACAAGGCCTGGTAAGTCTA
ATTTAGACGATAAAGGTAACATGATTCCGATTCCTCGTATTACCGATGCAAATAATCCTCCTCTCTCTCTAATAATGGAT
GCAAAAAATAATGAATGGCGTAATATTGCCGAATTATACGCTAATGATAGAGTTTTAGTTTCCGTATCTCCTAATTTTGC
CAATACGGATGCTACAGTTGAGGATGCTTTTAAAGATGATAAGGTTACGAAAGATTGTTCCCAAGGCAAAACTGCTTATG
AGTCGATTTGTGGAAAATATTCTATTTATTCCGGTAAATATGTTAATGCTTGCGAACTGAAGCAAAATTATTGGCAAGGT
AATAAGCATCGGGAAACATGTTATTGTTTTTTGGGATGTATTTATCCAGAAAATGTTCCACCGTTGGTATGTGAAGCTGC
TAATGTCTCTTTTCATTGTTGCATTGGTTTTACATGTGACTCCTTACCTGCTTGGATAAATCATGAGGGCGACATGCCGG
AGGCTTATAAAGATGACGGTAGTTTTACCTTTAGCTGGTCGAATAATTCCAGTAATTTATTTATTGATTATGCGGGACTT
CAATGTTCTAATAACGCCAATATTCCTCCAAACGGTAAATGTCCTGATATTGTCGAGAATCGTAGTCCTAAGGATAAAGA
TTATATTGGAGGTGTAAATTGTACTTCCGGCATATGTCAGGATGGAGATTTTCAAAAGAATCGAAGATTTTGGTATACAG
CGGACGGTAAAGGAGGCAAAGGACCAACTGGATTGATATATCAAATGAATGATTCAGGTTCTGTAAGTCAAGCTCTACCT
TCTAAGCTAGAATTTGCTGAGTTTGTTGCGGAGACAGAGCAACCGCATGACTATAAAGATAAAGACGGTAAATATTTATA
TAAAGTTATATATAATAGACCCTTTAACAGTAATATTGAAAAAAGCTATTTACAATATAGGCTTTGGTCTCCCGCTTCAC
AAGATGCTAGTAAGAATACGGGAGGATACGTTTTAAATATTAAACAGACTAAATGCTATAGAGAGAATGGTAATAGTTTT
AACGATACTTTTGATGATCGGGGACGAGTGCAATACATCATAGTCAAGCCTTCGGAAAACCCGAATACTAGCGGTAAAAC
ATATTCACCTCAAGGTATTAGCGTTGATAGTGACGGTAAATATAACTTTAACGCAAATGAGGCTGGTTATATATGGATGA
AAATTCTAAATGATCCTAGTAATAATTTAAGGGACTATAAAGATAGTGAAGGTAGCTATAAAGTACATTTCTCAACATCC
TTAAAAGTAGGAAGTTTTACTATTAAAGTAATGAATCCGTTACTTCAGTTATTTAAAACTAAAGTGCAAGGAGCAGCTAC
TTCTATTTTTAAAAATATGGTATGTTATAAAGCCACTGATAATGCATCATGTACTAACTTTTTTACCTATATTAAAGCGA
TTTTAATTCTATATGTGATGACTTATGGAGCAATGTTCTTGCTTGGTTTCGCTAAGATAAACCAAAAAGAGCTAGTAATT
AGAATAGCAAAAATTGGGGTAGTTAGCGGACTTATGAACGGTAATACCTTTGAATTTTTCAATAACTATCTTTTTGATGC
AATTACTAATTTTTCAGACGCAATTATTGCTAATATGAGTGGATATAGTTTGTTTACTTCTACTAATACTATTTCTAATC
CTTTCATGTTTTTAGATGCAGTAATGAGTAAAGTATTTTTTAGTCAAACCTTTATCGCTCAATTACTTTCACTTCTTTCT
CTTGGGCTTAGCGGTATTATATATTTTATAATTACTTTTATTGCGGTTGGTATAGTAATTATTACGGCACTTAGAGCTGT
TGCCGTTTATATTATGGCATTTATGGCAACTTGTATATTAATCGGTATAGCCCCTTTATTTATTAGTTTCTTATTATTTG
ATTTTACTAGGTATTTATTTGATAATTGGGTTAGGTTTACAATCCGCTATATGATAGAACCGGTAGTTATGATGGCAGGT
ATTATAGTGCTAACCCAGCTATTTACCATTTATCTAGATTTTGTTTTAGGTTATAGCGTTTGTTGGAAATGTGCTTTACC
GATAAAAATTCCGTTTATCGGTACTATTTTACCTATTGCATTGCTGAATGTACCTATCTTCTGTATTAATTGGTTTGCCC
CTTGGGGAATGGATTATATGTCGGGTATGATGGGAGTAAATATGCAAAATATCGTAGCTCTAGTTATTATTGCTTACGGT
ATGTATGGTTATGTCGAATTTTCAGGGCGTATGGTAGCAAAATTAACTAGTGCTGCCGGTCCTTCTGCTACTGACATTGG
TGGTAGAATGTCTCATGATGCAGGACAAAAAGCATTAAGTCCAATAGGAATGGATGATAAAACAAGACAAGGTATTACCA
GCAGAGCAGCAGCACGATTAAAACAACGCAATAAGACATTAGATCAAGCTGAAAAAAATAGGAAAAATACGCCAAAAGAA
GGGGGTGAAAAGACAAATGAAGAACCACCTAAACCTGAAACACTAAAATAG

Upstream 100 bases:

>100_bases
GCGTAAAGATGGAAAACAGCAAGGCTGGGATTCAGAAAGCGGTGCAGGTGGAGGATTAGCTGATTTAGCAAGTGGTGCGG
GTGGAGGTAAATAATAGAAT

Downstream 100 bases:

>100_bases
ATGGTGAATCGAAAATCGTCATTGCGAGTGGGTATTAGTGTTGTTGCATTGCTAGTGTTATGTCATTCACGCTTCCGCAT
TTTTCAAGCCATGCAACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 976; Mature: 976

Protein sequence:

>976_residues
MQSNLLKVFGVLAIVATLVCFIFAVLGMIGAVKVGDGCYMRYAPDGKGGSDSITGTITLNANANYVNTSKILPDGTTQLI
PDPNHYGEWLNTQVLVEKSQPVNLQVVGQVSLCLAYVPKDNLQFTESTRPGKSNLDDKGNMIPIPRITDANNPPLSLIMD
AKNNEWRNIAELYANDRVLVSVSPNFANTDATVEDAFKDDKVTKDCSQGKTAYESICGKYSIYSGKYVNACELKQNYWQG
NKHRETCYCFLGCIYPENVPPLVCEAANVSFHCCIGFTCDSLPAWINHEGDMPEAYKDDGSFTFSWSNNSSNLFIDYAGL
QCSNNANIPPNGKCPDIVENRSPKDKDYIGGVNCTSGICQDGDFQKNRRFWYTADGKGGKGPTGLIYQMNDSGSVSQALP
SKLEFAEFVAETEQPHDYKDKDGKYLYKVIYNRPFNSNIEKSYLQYRLWSPASQDASKNTGGYVLNIKQTKCYRENGNSF
NDTFDDRGRVQYIIVKPSENPNTSGKTYSPQGISVDSDGKYNFNANEAGYIWMKILNDPSNNLRDYKDSEGSYKVHFSTS
LKVGSFTIKVMNPLLQLFKTKVQGAATSIFKNMVCYKATDNASCTNFFTYIKAILILYVMTYGAMFLLGFAKINQKELVI
RIAKIGVVSGLMNGNTFEFFNNYLFDAITNFSDAIIANMSGYSLFTSTNTISNPFMFLDAVMSKVFFSQTFIAQLLSLLS
LGLSGIIYFIITFIAVGIVIITALRAVAVYIMAFMATCILIGIAPLFISFLLFDFTRYLFDNWVRFTIRYMIEPVVMMAG
IIVLTQLFTIYLDFVLGYSVCWKCALPIKIPFIGTILPIALLNVPIFCINWFAPWGMDYMSGMMGVNMQNIVALVIIAYG
MYGYVEFSGRMVAKLTSAAGPSATDIGGRMSHDAGQKALSPIGMDDKTRQGITSRAAARLKQRNKTLDQAEKNRKNTPKE
GGEKTNEEPPKPETLK

Sequences:

>Translated_976_residues
MQSNLLKVFGVLAIVATLVCFIFAVLGMIGAVKVGDGCYMRYAPDGKGGSDSITGTITLNANANYVNTSKILPDGTTQLI
PDPNHYGEWLNTQVLVEKSQPVNLQVVGQVSLCLAYVPKDNLQFTESTRPGKSNLDDKGNMIPIPRITDANNPPLSLIMD
AKNNEWRNIAELYANDRVLVSVSPNFANTDATVEDAFKDDKVTKDCSQGKTAYESICGKYSIYSGKYVNACELKQNYWQG
NKHRETCYCFLGCIYPENVPPLVCEAANVSFHCCIGFTCDSLPAWINHEGDMPEAYKDDGSFTFSWSNNSSNLFIDYAGL
QCSNNANIPPNGKCPDIVENRSPKDKDYIGGVNCTSGICQDGDFQKNRRFWYTADGKGGKGPTGLIYQMNDSGSVSQALP
SKLEFAEFVAETEQPHDYKDKDGKYLYKVIYNRPFNSNIEKSYLQYRLWSPASQDASKNTGGYVLNIKQTKCYRENGNSF
NDTFDDRGRVQYIIVKPSENPNTSGKTYSPQGISVDSDGKYNFNANEAGYIWMKILNDPSNNLRDYKDSEGSYKVHFSTS
LKVGSFTIKVMNPLLQLFKTKVQGAATSIFKNMVCYKATDNASCTNFFTYIKAILILYVMTYGAMFLLGFAKINQKELVI
RIAKIGVVSGLMNGNTFEFFNNYLFDAITNFSDAIIANMSGYSLFTSTNTISNPFMFLDAVMSKVFFSQTFIAQLLSLLS
LGLSGIIYFIITFIAVGIVIITALRAVAVYIMAFMATCILIGIAPLFISFLLFDFTRYLFDNWVRFTIRYMIEPVVMMAG
IIVLTQLFTIYLDFVLGYSVCWKCALPIKIPFIGTILPIALLNVPIFCINWFAPWGMDYMSGMMGVNMQNIVALVIIAYG
MYGYVEFSGRMVAKLTSAAGPSATDIGGRMSHDAGQKALSPIGMDDKTRQGITSRAAARLKQRNKTLDQAEKNRKNTPKE
GGEKTNEEPPKPETLK
>Mature_976_residues
MQSNLLKVFGVLAIVATLVCFIFAVLGMIGAVKVGDGCYMRYAPDGKGGSDSITGTITLNANANYVNTSKILPDGTTQLI
PDPNHYGEWLNTQVLVEKSQPVNLQVVGQVSLCLAYVPKDNLQFTESTRPGKSNLDDKGNMIPIPRITDANNPPLSLIMD
AKNNEWRNIAELYANDRVLVSVSPNFANTDATVEDAFKDDKVTKDCSQGKTAYESICGKYSIYSGKYVNACELKQNYWQG
NKHRETCYCFLGCIYPENVPPLVCEAANVSFHCCIGFTCDSLPAWINHEGDMPEAYKDDGSFTFSWSNNSSNLFIDYAGL
QCSNNANIPPNGKCPDIVENRSPKDKDYIGGVNCTSGICQDGDFQKNRRFWYTADGKGGKGPTGLIYQMNDSGSVSQALP
SKLEFAEFVAETEQPHDYKDKDGKYLYKVIYNRPFNSNIEKSYLQYRLWSPASQDASKNTGGYVLNIKQTKCYRENGNSF
NDTFDDRGRVQYIIVKPSENPNTSGKTYSPQGISVDSDGKYNFNANEAGYIWMKILNDPSNNLRDYKDSEGSYKVHFSTS
LKVGSFTIKVMNPLLQLFKTKVQGAATSIFKNMVCYKATDNASCTNFFTYIKAILILYVMTYGAMFLLGFAKINQKELVI
RIAKIGVVSGLMNGNTFEFFNNYLFDAITNFSDAIIANMSGYSLFTSTNTISNPFMFLDAVMSKVFFSQTFIAQLLSLLS
LGLSGIIYFIITFIAVGIVIITALRAVAVYIMAFMATCILIGIAPLFISFLLFDFTRYLFDNWVRFTIRYMIEPVVMMAG
IIVLTQLFTIYLDFVLGYSVCWKCALPIKIPFIGTILPIALLNVPIFCINWFAPWGMDYMSGMMGVNMQNIVALVIIAYG
MYGYVEFSGRMVAKLTSAAGPSATDIGGRMSHDAGQKALSPIGMDDKTRQGITSRAAARLKQRNKTLDQAEKNRKNTPKE
GGEKTNEEPPKPETLK

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 108391; Mature: 108391

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS00652 TNFR_NGFR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSNLLKVFGVLAIVATLVCFIFAVLGMIGAVKVGDGCYMRYAPDGKGGSDSITGTITLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEEECCCCCCCCCCEEEEEEEE
ANANYVNTSKILPDGTTQLIPDPNHYGEWLNTQVLVEKSQPVNLQVVGQVSLCLAYVPKD
CCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCEEEECEEEEEEEECCCC
NLQFTESTRPGKSNLDDKGNMIPIPRITDANNPPLSLIMDAKNNEWRNIAELYANDRVLV
CCEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCEEEE
SVSPNFANTDATVEDAFKDDKVTKDCSQGKTAYESICGKYSIYSGKYVNACELKQNYWQG
EECCCCCCCCCHHHHHHCCCCCCHHHHCCCHHHHHHCCCEEECCCCCCCHHHHHHHHCCC
NKHRETCYCFLGCIYPENVPPLVCEAANVSFHCCIGFTCDSLPAWINHEGDMPEAYKDDG
CCCCCEEEEEEEEECCCCCCCCEEECCCCEEEEEEECCCCCCCHHHCCCCCCCCHHCCCC
SFTFSWSNNSSNLFIDYAGLQCSNNANIPPNGKCPDIVENRSPKDKDYIGGVNCTSGICQ
CEEEEECCCCCEEEEEEECEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
DGDFQKNRRFWYTADGKGGKGPTGLIYQMNDSGSVSQALPSKLEFAEFVAETEQPHDYKD
CCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
KDGKYLYKVIYNRPFNSNIEKSYLQYRLWSPASQDASKNTGGYVLNIKQTKCYRENGNSF
CCCCEEEEEEECCCCCCCHHHHHHHEEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCC
NDTFDDRGRVQYIIVKPSENPNTSGKTYSPQGISVDSDGKYNFNANEAGYIWMKILNDPS
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCC
NNLRDYKDSEGSYKVHFSTSLKVGSFTIKVMNPLLQLFKTKVQGAATSIFKNMVCYKATD
CCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC
NASCTNFFTYIKAILILYVMTYGAMFLLGFAKINQKELVIRIAKIGVVSGLMNGNTFEFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
NNYLFDAITNFSDAIIANMSGYSLFTSTNTISNPFMFLDAVMSKVFFSQTFIAQLLSLLS
HHHHHHHHHCCCHHHEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLSGIIYFIITFIAVGIVIITALRAVAVYIMAFMATCILIGIAPLFISFLLFDFTRYLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNWVRFTIRYMIEPVVMMAGIIVLTQLFTIYLDFVLGYSVCWKCALPIKIPFIGTILPIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHH
LLNVPIFCINWFAPWGMDYMSGMMGVNMQNIVALVIIAYGMYGYVEFSGRMVAKLTSAAG
HHCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCEEEEHHHHCCC
PSATDIGGRMSHDAGQKALSPIGMDDKTRQGITSRAAARLKQRNKTLDQAEKNRKNTPKE
CCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
GGEKTNEEPPKPETLK
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSNLLKVFGVLAIVATLVCFIFAVLGMIGAVKVGDGCYMRYAPDGKGGSDSITGTITLN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEEECCCCCCCCCCEEEEEEEE
ANANYVNTSKILPDGTTQLIPDPNHYGEWLNTQVLVEKSQPVNLQVVGQVSLCLAYVPKD
CCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCEEEECEEEEEEEECCCC
NLQFTESTRPGKSNLDDKGNMIPIPRITDANNPPLSLIMDAKNNEWRNIAELYANDRVLV
CCEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCEEEE
SVSPNFANTDATVEDAFKDDKVTKDCSQGKTAYESICGKYSIYSGKYVNACELKQNYWQG
EECCCCCCCCCHHHHHHCCCCCCHHHHCCCHHHHHHCCCEEECCCCCCCHHHHHHHHCCC
NKHRETCYCFLGCIYPENVPPLVCEAANVSFHCCIGFTCDSLPAWINHEGDMPEAYKDDG
CCCCCEEEEEEEEECCCCCCCCEEECCCCEEEEEEECCCCCCCHHHCCCCCCCCHHCCCC
SFTFSWSNNSSNLFIDYAGLQCSNNANIPPNGKCPDIVENRSPKDKDYIGGVNCTSGICQ
CEEEEECCCCCEEEEEEECEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
DGDFQKNRRFWYTADGKGGKGPTGLIYQMNDSGSVSQALPSKLEFAEFVAETEQPHDYKD
CCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
KDGKYLYKVIYNRPFNSNIEKSYLQYRLWSPASQDASKNTGGYVLNIKQTKCYRENGNSF
CCCCEEEEEEECCCCCCCHHHHHHHEEECCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCC
NDTFDDRGRVQYIIVKPSENPNTSGKTYSPQGISVDSDGKYNFNANEAGYIWMKILNDPS
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCC
NNLRDYKDSEGSYKVHFSTSLKVGSFTIKVMNPLLQLFKTKVQGAATSIFKNMVCYKATD
CCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC
NASCTNFFTYIKAILILYVMTYGAMFLLGFAKINQKELVIRIAKIGVVSGLMNGNTFEFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
NNYLFDAITNFSDAIIANMSGYSLFTSTNTISNPFMFLDAVMSKVFFSQTFIAQLLSLLS
HHHHHHHHHCCCHHHEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLSGIIYFIITFIAVGIVIITALRAVAVYIMAFMATCILIGIAPLFISFLLFDFTRYLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNWVRFTIRYMIEPVVMMAGIIVLTQLFTIYLDFVLGYSVCWKCALPIKIPFIGTILPIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHH
LLNVPIFCINWFAPWGMDYMSGMMGVNMQNIVALVIIAYGMYGYVEFSGRMVAKLTSAAG
HHCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCEEEEHHHHCCC
PSATDIGGRMSHDAGQKALSPIGMDDKTRQGITSRAAARLKQRNKTLDQAEKNRKNTPKE
CCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
GGEKTNEEPPKPETLK
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA