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The map label for this gene is ompW [C]

Identifier: 157825235

GI number: 157825235

Start: 96288

End: 97022

Strand: Reverse

Name: ompW [C]

Synonym: A1C_00570

Alternate gene names: 157825235

Gene position: 97022-96288 (Counterclockwise)

Preceding gene: 157825238

Following gene: 157825234

Centisome position: 7.88

GC content: 34.56

Gene sequence:

>735_bases
ATGTTAAGAATAGTGCAAAAATTAGGGATAATTTTGTTTGTATCCAGCATAAGTATTAATAGTTTTGCTAAAATCATGTA
TGATGATGTAGATTCTGCTCCTGATTATGATAGTACACCGTATTACGAAAACGAAGGAAATTTAGTTTTCAAGATGCGTC
TAGGAGGTGTTTTCTCAAGTGCTAAGCAAAAAGTACTACCTACGCCTACCTCTCCTCAACCTGTTCCAGTGGGAGAAGTT
GCAAAAAACGGTTATGGAGGTGATGCATCTACTACTATATTCTTTAACAATTATTTAGCTACTGAATTATCGCTTGGCTT
TAATGTTTTACGCACTAAATATACATCCCTTGCATCCGTTGCTCATAATTATAGCGTTGATAATGTCAAACTAGGAAAAC
ACAAACCTATTTATATGATTCCTGCAACGGTTACCGGACAATTTCATATAGCCCCTTACGGTGGAATAAGACCGTATATA
GGCATAGGTTATCACGGTTCTTATATGCTTACGCAAGCTACCGGTCTTAAAATTAGAAACGGATACGGTGCCGTAGGACA
AATAGGTGTAGATTTTTATGCTAAAGATGAGACTTTAATCAATATTGACGTAAGGCAATTTTTCTTAAATCCTAAACTTG
AGTATAAACCGAATTTAGTAGGTACTAAAACCATTACCTCTAAAGTGAAACTTAATCCTTTAATAGTTTCTATAGGTATA
GGATTTACTTTTTAA

Upstream 100 bases:

>100_bases
AAAGAATTCTATCATTTATAACGATAGTATAAATATATAAATAAAAATTTTATATACTAATACGGTAATCAATTTTAAGC
AAGTAAAGGTTATAATTAAT

Downstream 100 bases:

>100_bases
GAATATACGGCACTTTTCTATGTCATGCCCCAGCGCAAAAGCGGGAATCCAGAATAAAAGTGTAGATACAGCAAATTTTT
AAAATTAAAAGCTCGATTTA

Product: OmpW family outer-membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MLRIVQKLGIILFVSSISINSFAKIMYDDVDSAPDYDSTPYYENEGNLVFKMRLGGVFSSAKQKVLPTPTSPQPVPVGEV
AKNGYGGDASTTIFFNNYLATELSLGFNVLRTKYTSLASVAHNYSVDNVKLGKHKPIYMIPATVTGQFHIAPYGGIRPYI
GIGYHGSYMLTQATGLKIRNGYGAVGQIGVDFYAKDETLINIDVRQFFLNPKLEYKPNLVGTKTITSKVKLNPLIVSIGI
GFTF

Sequences:

>Translated_244_residues
MLRIVQKLGIILFVSSISINSFAKIMYDDVDSAPDYDSTPYYENEGNLVFKMRLGGVFSSAKQKVLPTPTSPQPVPVGEV
AKNGYGGDASTTIFFNNYLATELSLGFNVLRTKYTSLASVAHNYSVDNVKLGKHKPIYMIPATVTGQFHIAPYGGIRPYI
GIGYHGSYMLTQATGLKIRNGYGAVGQIGVDFYAKDETLINIDVRQFFLNPKLEYKPNLVGTKTITSKVKLNPLIVSIGI
GFTF
>Mature_244_residues
MLRIVQKLGIILFVSSISINSFAKIMYDDVDSAPDYDSTPYYENEGNLVFKMRLGGVFSSAKQKVLPTPTSPQPVPVGEV
AKNGYGGDASTTIFFNNYLATELSLGFNVLRTKYTSLASVAHNYSVDNVKLGKHKPIYMIPATVTGQFHIAPYGGIRPYI
GIGYHGSYMLTQATGLKIRNGYGAVGQIGVDFYAKDETLINIDVRQFFLNPKLEYKPNLVGTKTITSKVKLNPLIVSIGI
GFTF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 26757; Mature: 26757

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIVQKLGIILFVSSISINSFAKIMYDDVDSAPDYDSTPYYENEGNLVFKMRLGGVFSS
CCHHHHHCCEEEEEEECCCCHHHHHEECCCCCCCCCCCCCCEECCCCEEEEEEECCHHHH
AKQKVLPTPTSPQPVPVGEVAKNGYGGDASTTIFFNNYLATELSLGFNVLRTKYTSLASV
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCEEEEHHHCCHHHHHHHHHHHHHH
AHNYSVDNVKLGKHKPIYMIPATVTGQFHIAPYGGIRPYIGIGYHGSYMLTQATGLKIRN
HHCCCCCCEEECCCCCEEEECCEECCEEEEEECCCCCCEEEECCCCCEEEEEECCEEEEC
GYGAVGQIGVDFYAKDETLINIDVRQFFLNPKLEYKPNLVGTKTITSKVKLNPLIVSIGI
CCCCEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCEEECEEEECEEEECEEEEEEEC
GFTF
EECC
>Mature Secondary Structure
MLRIVQKLGIILFVSSISINSFAKIMYDDVDSAPDYDSTPYYENEGNLVFKMRLGGVFSS
CCHHHHHCCEEEEEEECCCCHHHHHEECCCCCCCCCCCCCCEECCCCEEEEEEECCHHHH
AKQKVLPTPTSPQPVPVGEVAKNGYGGDASTTIFFNNYLATELSLGFNVLRTKYTSLASV
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCEEEEHHHCCHHHHHHHHHHHHHH
AHNYSVDNVKLGKHKPIYMIPATVTGQFHIAPYGGIRPYIGIGYHGSYMLTQATGLKIRN
HHCCCCCCEEECCCCCEEEECCEECCEEEEEECCCCCCEEEECCCCCEEEEEECCEEEEC
GYGAVGQIGVDFYAKDETLINIDVRQFFLNPKLEYKPNLVGTKTITSKVKLNPLIVSIGI
CCCCEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCCCEEECEEEECEEEECEEEEEEEC
GFTF
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA