| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825178
Identifier: 157825178
GI number: 157825178
Start: 43287
End: 43862
Strand: Direct
Name: 157825178
Synonym: A1C_00285
Alternate gene names: NA
Gene position: 43287-43862 (Clockwise)
Preceding gene: 157825174
Following gene: 157825179
Centisome position: 3.52
GC content: 30.03
Gene sequence:
>576_bases ATGTCGCAGCTACAAATTATAGAACGTAACGATACAAATTTTGATAGCTTTATTTATAGAGTGCGTTCTTATATTTATAA TAATTTAATAAAAAAGCTAGGAAATGATAAAGGAAATTTTGCAGCTGCGATATTACTCGGTAATACGAAAGGTTTAAACA TGCAAATAACGCAGGATATAAGACAAAGCGGTATATCACACGTGCTTTGCGTTTCAGGTTTGCATTTATCTTTAGTTGTG ATGATTATTTTCCTTATTACAAGATTTTTATTAAATCTCTCAAATTATTTTGCATATCATTTCAATATAAAATTAATCTC TGCTTATTGTTCACTAATAGGAAGTTTTGGTTATTTAGAGCTAAGCGGTATGCAAATTGCAGCAACTAGAGCCTTTATTA CTGCTGCAATCTTTATTTACTGTATTATTATCGAACGTTCTTGCTTTCCTCTTCGTTCACTTACAATTGCAGCTTTTATA ATATTATCGTTAAATCCAGAATATATTTTTCATCCAAGTTTCCAATTATCTTTTATCGCCGTATTATCACCTATTACAGG TTACGAGTTTTACTGA
Upstream 100 bases:
>100_bases GCTTTTTAAACTCTATAAGCCGCAAAATAGTATACTCCCCGGGGATATGATTTTGGTTTTTATGCTTATCTATCGGATAT AGGTGGCAAACTGCTATGCC
Downstream 100 bases:
>100_bases AAAAATTCGTGGTTAATTAGGGAAAATAAAGGCATTTTTGGAGCAGTAAATTATTATATGGCTTCAAATATTTATTCAAG CTTCTTAGACAGTATTATCA
Product: ComEC/Rec2 family protein
Products: NA
Alternate protein names: Competence Protein; ComEC/Rec2 Family Protein; DNA Uptake Protein; DNA Internalization-Related Competence; DNA Uptake Protein ComEC; DNA Translocation Competence Protein; DNA Translocation Competence; DNA Translocation Competence Protein ComA; Transmembrane DNA Uptake Competence-Related Protein; Competence Locus E; ComEC/Rec2-Like Protein
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSQLQIIERNDTNFDSFIYRVRSYIYNNLIKKLGNDKGNFAAAILLGNTKGLNMQITQDIRQSGISHVLCVSGLHLSLVV MIIFLITRFLLNLSNYFAYHFNIKLISAYCSLIGSFGYLELSGMQIAATRAFITAAIFIYCIIIERSCFPLRSLTIAAFI ILSLNPEYIFHPSFQLSFIAVLSPITGYEFY
Sequences:
>Translated_191_residues MSQLQIIERNDTNFDSFIYRVRSYIYNNLIKKLGNDKGNFAAAILLGNTKGLNMQITQDIRQSGISHVLCVSGLHLSLVV MIIFLITRFLLNLSNYFAYHFNIKLISAYCSLIGSFGYLELSGMQIAATRAFITAAIFIYCIIIERSCFPLRSLTIAAFI ILSLNPEYIFHPSFQLSFIAVLSPITGYEFY >Mature_190_residues SQLQIIERNDTNFDSFIYRVRSYIYNNLIKKLGNDKGNFAAAILLGNTKGLNMQITQDIRQSGISHVLCVSGLHLSLVVM IIFLITRFLLNLSNYFAYHFNIKLISAYCSLIGSFGYLELSGMQIAATRAFITAAIFIYCIIIERSCFPLRSLTIAAFII LSLNPEYIFHPSFQLSFIAVLSPITGYEFY
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21655; Mature: 21524
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLQIIERNDTNFDSFIYRVRSYIYNNLIKKLGNDKGNFAAAILLGNTKGLNMQITQDI CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEHHHH RQSGISHVLCVSGLHLSLVVMIIFLITRFLLNLSNYFAYHFNIKLISAYCSLIGSFGYLE HHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCEEE LSGMQIAATRAFITAAIFIYCIIIERSCFPLRSLTIAAFIILSLNPEYIFHPSFQLSFIA ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCEEECCCHHHHHHH VLSPITGYEFY HHCCCCCCCCC >Mature Secondary Structure SQLQIIERNDTNFDSFIYRVRSYIYNNLIKKLGNDKGNFAAAILLGNTKGLNMQITQDI CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEHHHH RQSGISHVLCVSGLHLSLVVMIIFLITRFLLNLSNYFAYHFNIKLISAYCSLIGSFGYLE HHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCEEE LSGMQIAATRAFITAAIFIYCIIIERSCFPLRSLTIAAFIILSLNPEYIFHPSFQLSFIA ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCEEECCCHHHHHHH VLSPITGYEFY HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA