| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825176
Identifier: 157825176
GI number: 157825176
Start: 37122
End: 37631
Strand: Reverse
Name: 157825176
Synonym: A1C_00275
Alternate gene names: NA
Gene position: 37631-37122 (Counterclockwise)
Preceding gene: 157825177
Following gene: 157825175
Centisome position: 3.06
GC content: 22.94
Gene sequence:
>510_bases TTGCTTCAAAAAGTTTGGTTGAAAACGCAAAGTTTAGTGTACTTAGACTCTGATTTTATTAACATAGATTTTTTTAAAGA ATTGTTTCTAATAGATGAAGAGAAATTGCAAGAATCTATAAAAAGATTAGAACCATTACCTATAGTAAACGTGATATGCC AAAATGGACAAAATAATTTGCAATTACATAGGTTAGTACAAATCTCAATAAAAAATTATATAAGCGACAACTTAGATCAT ATAATAAATAAAAAAGAAATTCATGCTAAACTAATAGAAGCCTTAGATGATTTATTACCCCAATTAACTAATATTCCAAA TGAAGACTTGAATAGTGCAAAAATACTTTATCCTCATGTGATTAAAATATTAAATTATAATATTGAAATTGATAAATTTA GAAAGGCAAATTTATATCAAAAAATAGGTTGTTATCAAGACTATATATTATATAAATTTGAGGAGTCATTAAAATATCAT AAAGAAACTTTTAAAATATATAAAGTATGA
Upstream 100 bases:
>100_bases CCGTAGGGGTCACCATTCTATGTTTTCCTATAAACTCATTATCTCAAACAATCTAATTTTAATAAAAATAATAATTGAAA GTAATAACTTTTAATTTATT
Downstream 100 bases:
>100_bases TTTAAAGGAAATCATATGGATATTGCAATTTCTCTTAATAATGTTGGAGCAGTTTACGATAAACTGATAAACTAGGTGAT ACTGAAAAAGCACTAAAATA
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MLQKVWLKTQSLVYLDSDFINIDFFKELFLIDEEKLQESIKRLEPLPIVNVICQNGQNNLQLHRLVQISIKNYISDNLDH IINKKEIHAKLIEALDDLLPQLTNIPNEDLNSAKILYPHVIKILNYNIEIDKFRKANLYQKIGCYQDYILYKFEESLKYH KETFKIYKV
Sequences:
>Translated_169_residues MLQKVWLKTQSLVYLDSDFINIDFFKELFLIDEEKLQESIKRLEPLPIVNVICQNGQNNLQLHRLVQISIKNYISDNLDH IINKKEIHAKLIEALDDLLPQLTNIPNEDLNSAKILYPHVIKILNYNIEIDKFRKANLYQKIGCYQDYILYKFEESLKYH KETFKIYKV >Mature_169_residues MLQKVWLKTQSLVYLDSDFINIDFFKELFLIDEEKLQESIKRLEPLPIVNVICQNGQNNLQLHRLVQISIKNYISDNLDH IINKKEIHAKLIEALDDLLPQLTNIPNEDLNSAKILYPHVIKILNYNIEIDKFRKANLYQKIGCYQDYILYKFEESLKYH KETFKIYKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20184; Mature: 20184
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQKVWLKTQSLVYLDSDFINIDFFKELFLIDEEKLQESIKRLEPLPIVNVICQNGQNNL CCCHHHCCCCEEEEECCCEECHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCCCH QLHRLVQISIKNYISDNLDHIINKKEIHAKLIEALDDLLPQLTNIPNEDLNSAKILYPHV HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH IKILNYNIEIDKFRKANLYQKIGCYQDYILYKFEESLKYHKETFKIYKV HHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC >Mature Secondary Structure MLQKVWLKTQSLVYLDSDFINIDFFKELFLIDEEKLQESIKRLEPLPIVNVICQNGQNNL CCCHHHCCCCEEEEECCCEECHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCCCH QLHRLVQISIKNYISDNLDHIINKKEIHAKLIEALDDLLPQLTNIPNEDLNSAKILYPHV HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH IKILNYNIEIDKFRKANLYQKIGCYQDYILYKFEESLKYHKETFKIYKV HHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA