Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

Click here to switch to the map view.

The map label for this gene is 157825176

Identifier: 157825176

GI number: 157825176

Start: 37122

End: 37631

Strand: Reverse

Name: 157825176

Synonym: A1C_00275

Alternate gene names: NA

Gene position: 37631-37122 (Counterclockwise)

Preceding gene: 157825177

Following gene: 157825175

Centisome position: 3.06

GC content: 22.94

Gene sequence:

>510_bases
TTGCTTCAAAAAGTTTGGTTGAAAACGCAAAGTTTAGTGTACTTAGACTCTGATTTTATTAACATAGATTTTTTTAAAGA
ATTGTTTCTAATAGATGAAGAGAAATTGCAAGAATCTATAAAAAGATTAGAACCATTACCTATAGTAAACGTGATATGCC
AAAATGGACAAAATAATTTGCAATTACATAGGTTAGTACAAATCTCAATAAAAAATTATATAAGCGACAACTTAGATCAT
ATAATAAATAAAAAAGAAATTCATGCTAAACTAATAGAAGCCTTAGATGATTTATTACCCCAATTAACTAATATTCCAAA
TGAAGACTTGAATAGTGCAAAAATACTTTATCCTCATGTGATTAAAATATTAAATTATAATATTGAAATTGATAAATTTA
GAAAGGCAAATTTATATCAAAAAATAGGTTGTTATCAAGACTATATATTATATAAATTTGAGGAGTCATTAAAATATCAT
AAAGAAACTTTTAAAATATATAAAGTATGA

Upstream 100 bases:

>100_bases
CCGTAGGGGTCACCATTCTATGTTTTCCTATAAACTCATTATCTCAAACAATCTAATTTTAATAAAAATAATAATTGAAA
GTAATAACTTTTAATTTATT

Downstream 100 bases:

>100_bases
TTTAAAGGAAATCATATGGATATTGCAATTTCTCTTAATAATGTTGGAGCAGTTTACGATAAACTGATAAACTAGGTGAT
ACTGAAAAAGCACTAAAATA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MLQKVWLKTQSLVYLDSDFINIDFFKELFLIDEEKLQESIKRLEPLPIVNVICQNGQNNLQLHRLVQISIKNYISDNLDH
IINKKEIHAKLIEALDDLLPQLTNIPNEDLNSAKILYPHVIKILNYNIEIDKFRKANLYQKIGCYQDYILYKFEESLKYH
KETFKIYKV

Sequences:

>Translated_169_residues
MLQKVWLKTQSLVYLDSDFINIDFFKELFLIDEEKLQESIKRLEPLPIVNVICQNGQNNLQLHRLVQISIKNYISDNLDH
IINKKEIHAKLIEALDDLLPQLTNIPNEDLNSAKILYPHVIKILNYNIEIDKFRKANLYQKIGCYQDYILYKFEESLKYH
KETFKIYKV
>Mature_169_residues
MLQKVWLKTQSLVYLDSDFINIDFFKELFLIDEEKLQESIKRLEPLPIVNVICQNGQNNLQLHRLVQISIKNYISDNLDH
IINKKEIHAKLIEALDDLLPQLTNIPNEDLNSAKILYPHVIKILNYNIEIDKFRKANLYQKIGCYQDYILYKFEESLKYH
KETFKIYKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20184; Mature: 20184

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKVWLKTQSLVYLDSDFINIDFFKELFLIDEEKLQESIKRLEPLPIVNVICQNGQNNL
CCCHHHCCCCEEEEECCCEECHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCCCH
QLHRLVQISIKNYISDNLDHIINKKEIHAKLIEALDDLLPQLTNIPNEDLNSAKILYPHV
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
IKILNYNIEIDKFRKANLYQKIGCYQDYILYKFEESLKYHKETFKIYKV
HHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MLQKVWLKTQSLVYLDSDFINIDFFKELFLIDEEKLQESIKRLEPLPIVNVICQNGQNNL
CCCHHHCCCCEEEEECCCEECHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCCCH
QLHRLVQISIKNYISDNLDHIINKKEIHAKLIEALDDLLPQLTNIPNEDLNSAKILYPHV
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
IKILNYNIEIDKFRKANLYQKIGCYQDYILYKFEESLKYHKETFKIYKV
HHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA