| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825153
Identifier: 157825153
GI number: 157825153
Start: 21109
End: 21303
Strand: Reverse
Name: 157825153
Synonym: A1C_00150
Alternate gene names: NA
Gene position: 21303-21109 (Counterclockwise)
Preceding gene: 157825154
Following gene: 157825152
Centisome position: 1.73
GC content: 30.77
Gene sequence:
>195_bases ATGATTAATAATATTATTAATCGTGATGCTAATAATTACCGTATTACAGGCAAGGCGGTTTTAGGAGAAGAATTAGTATA TGGCAATAAAAACGCGAAAGTGCAAATCGATCTTTTAGAATCGTTAAATGATGTTAAATTAATTATTACCGGCAATGATA TTAGTGCTATTGATTCTATAGTAATGAGCGGCTGA
Upstream 100 bases:
>100_bases TGCAAGTCCCCTTATTGACAATTGGCATAACGGTATTAGCGATCGAAAAGGAATTGGACGAATTATAATTACTCCTGGGT TTGAGGGTAACATTAATGTC
Downstream 100 bases:
>100_bases ACTAATGAAATAATTTTCCAAATATTTATGAAGTTGGTGCAGTAAATAAAAGGATTGAGAAGTTAGCATTTATTGGTAAT CATGTTCATAACCTACGTAA
Product: cell surface antigen-like protein Sca10
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MINNIINRDANNYRITGKAVLGEELVYGNKNAKVQIDLLESLNDVKLIITGNDISAIDSIVMSG
Sequences:
>Translated_64_residues MINNIINRDANNYRITGKAVLGEELVYGNKNAKVQIDLLESLNDVKLIITGNDISAIDSIVMSG >Mature_64_residues MINNIINRDANNYRITGKAVLGEELVYGNKNAKVQIDLLESLNDVKLIITGNDISAIDSIVMSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6976; Mature: 6976
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNIINRDANNYRITGKAVLGEELVYGNKNAKVQIDLLESLNDVKLIITGNDISAIDSI CCCCCCCCCCCCEEEEEEEEECCEEEECCCCCEEEEEECCCCCCEEEEEECCCHHHHHHH VMSG CCCC >Mature Secondary Structure MINNIINRDANNYRITGKAVLGEELVYGNKNAKVQIDLLESLNDVKLIITGNDISAIDSI CCCCCCCCCCCCEEEEEEEEECCEEEECCCCCEEEEEECCCCCCEEEEEECCCHHHHHHH VMSG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA