| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825149
Identifier: 157825149
GI number: 157825149
Start: 19433
End: 19570
Strand: Reverse
Name: 157825149
Synonym: A1C_00130
Alternate gene names: NA
Gene position: 19570-19433 (Counterclockwise)
Preceding gene: 157825150
Following gene: 157825148
Centisome position: 1.59
GC content: 40.58
Gene sequence:
>138_bases TTGCCCGGTAGTTTCGTTTCAAGTAATCAAGATGCATATAAAGGTAATCCTAGCTATAAAGGCACGGTATCCGGCGGTAC TATCAATTGTGATCTTTACATCGGGGAAAATAGCCTCGTTGATATTGCATATAGCTGA
Upstream 100 bases:
>100_bases GCAACTGCTAATATTAAGAATCACTTATCAAGCGGTACTATGATATCCGTTGCAGCAGGTTATGAAGAAAACCATATAAT GACTAAAAAAGGATTATGGG
Downstream 100 bases:
>100_bases ATGAACTGTGACTTTTTAGCAACACCAAGCTCAACTTTCACTTTAAGTTTAAAGGTTCAAGCACCGGTGATAAATTATCA GCAGAAAGCGATATGATTTC
Product: cell surface antigen-like protein Sca10
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MPGSFVSSNQDAYKGNPSYKGTVSGGTINCDLYIGENSLVDIAYS
Sequences:
>Translated_45_residues MPGSFVSSNQDAYKGNPSYKGTVSGGTINCDLYIGENSLVDIAYS >Mature_44_residues PGSFVSSNQDAYKGNPSYKGTVSGGTINCDLYIGENSLVDIAYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4721; Mature: 4590
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGSFVSSNQDAYKGNPSYKGTVSGGTINCDLYIGENSLVDIAYS CCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCEEEEEEC >Mature Secondary Structure PGSFVSSNQDAYKGNPSYKGTVSGGTINCDLYIGENSLVDIAYS CCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA