Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157376472

GI number:

Start: 4060294

End: 4061796

Strand: Reverse

Name: Not Available

Synonym: Ssed_3340

Alternate gene names: NA

Gene position: NA

Preceding gene: 157376473

Following gene: 157376469

Centisome position: NA

GC content: NA

Gene sequence:

>1503_bases
GTGGAAAGCGACTGGTATATCTGGTTTTTACTCATTTTATCTGTCGCTGGTATCATCTATTGGTACCGGCATAAAAAAGG
TGACACTGAGTTCATTCAAGCTTTAGTACAATACCTGAAAAGGCCTCACGGCTATCATCAGTTGCATGTTTCAGAGGTTC
CCACAAAATACATTCAGCTTTATCAAGCATTACAATACTTTATTGCAACCCTTCCTCTTCCGAGTGATAAAGATAAGTTA
ACTGGTTTTTCTAACCGTTTAGGACTGAAATCAAAACTTATGAGTCTGATGCCATTAACACAGGGAACCTTAGTGTTAAT
CGATGTCTATCGCTTTCGGTTCGTCAATGATCTGTTTGGCTTCTCTGTCGGTGATAAATTACTCCTCTCACTATCAAAGC
GCCTCACCGCTCTCGATGAAGAGGTGACGTTTCTGGCTCGCATGAACGAAGATGAGTTTTTGCTTTATTTTGACAGTGCC
CAAGCGGAAGATACACTGCTTTCTATCCGTCACGAGTTACAAGTTCCTTTTGAGATAGATGATACCCCGATAACGGTTCA
AATTCAGATGGGCTATCTGGATTTGGAGCAACATCATACAGATATGAGTCAGCTCTTAAGACGGCTGGATCTTGCCCTTA
TTAAAGCCAAACAAGATAAATATTTCTTCGCCAGCTATGTTAAAGGTGACGATGTCAGTCAACACCGCCAGCTCAGTATC
ATTAACCGACTTCCTAAGGCCTTAGCGTTAGGGGAGTTGTATATGGTTTACCAACCAAAACTAACTCTATCTGATGGGCG
ATGTGTACAGGTGGAGGCGTTAATGCGCTGGGAGCACCATCAATTAGGCGTGTTATCGCCGGCTGAATTTATTCCGCTTG
TAGAGTGTGCCGGGATGATAAAGGTTGTGAGCCAGTGGGCGCTGGATCAGGTTATCTCTCAACAGGCCAAATGGAAGCAG
TCGGGCTTACATCTGCAAGTCGCGGTGAATCTTTCTACTCAAGATCTTATCAGCGGCACACTATGTGATGATATTCAGGC
TAAGTTACACCGACATAAGGTCGATGCCAGTGCACTTTCCATTGAGATAACCGAGAGCACACTGATGGACGACATGGAGA
CTGCGGTTCAAACGATTAAGAGATTGAAGCAGGTTGGTGTTGACGTTGCTATCGATGATTTCGGTACGGGTCACTCTTCT
CTGGCTTATTTGAAAAACTTTCCCGTGGATGAGGTGAAAATTGATAAGGCGTTTATCGATGACCTGTTAGTCGACTCTCG
TGCATTACACATCATGAAATGCAGCATTGAGTTGGCAAAGGGGCTTGCCTTTAAGGTGACGGTTGAGGGAGTTGAAACCG
AGGAGATATATTTGGCATTGACGAATATGGGGGTCGATAAAATTCAAGGCGATCTCTTCGCGAAGCCGATGAGTGCCAAG
GAGCTCGAAGAGAGTTGGGGACTGCTTCAGCAGAGCTGTCTGCCCCGGATAAGCGAGCGTTAA

Upstream 100 bases:

>100_bases
ATACCACTCTATTAAACTGAGTTATGAGTAGGTGAACAGAGGACTTATTGTCTTCAGCTTTTAATTGATAAATAAACTAA
CATAGGGTTGACGGACTCGC

Downstream 100 bases:

>100_bases
CTTACCCGATTATCTTACGGGGATTTATTTTAATTATTCTATGAAAGTGCCGGTGAGTCGAAAGACTGACTGAGCCGCTC
GATTAAATCTGCCGACATGG

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>500_residues
MESDWYIWFLLILSVAGIIYWYRHKKGDTEFIQALVQYLKRPHGYHQLHVSEVPTKYIQLYQALQYFIATLPLPSDKDKL
TGFSNRLGLKSKLMSLMPLTQGTLVLIDVYRFRFVNDLFGFSVGDKLLLSLSKRLTALDEEVTFLARMNEDEFLLYFDSA
QAEDTLLSIRHELQVPFEIDDTPITVQIQMGYLDLEQHHTDMSQLLRRLDLALIKAKQDKYFFASYVKGDDVSQHRQLSI
INRLPKALALGELYMVYQPKLTLSDGRCVQVEALMRWEHHQLGVLSPAEFIPLVECAGMIKVVSQWALDQVISQQAKWKQ
SGLHLQVAVNLSTQDLISGTLCDDIQAKLHRHKVDASALSIEITESTLMDDMETAVQTIKRLKQVGVDVAIDDFGTGHSS
LAYLKNFPVDEVKIDKAFIDDLLVDSRALHIMKCSIELAKGLAFKVTVEGVETEEIYLALTNMGVDKIQGDLFAKPMSAK
ELEESWGLLQQSCLPRISER

Sequences:
NA

Specific function: NA

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA