Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157376285

GI number:

Start: 3808498

End: 3810981

Strand: Reverse

Name: Not Available

Synonym: Ssed_3153

Alternate gene names: NA

Gene position: NA

Preceding gene: 157376286

Following gene: 157376284

Centisome position: NA

GC content: NA

Gene sequence:

>2484_bases
ATGAGATTTAATAAACTTTTTGCCTCGATGGTATTAGTCGGTGCGTCTTTATCAGGGAACGGTTGGGCAGAAACATTCCA
ACCTTTTGAAGTAACCGATATACAAGTGCAAGGGTTACAGCGTGTAGCTCTTGGTGCCGCGCTACTGACCATTCCAGTTA
AGGTCGGTGATACGGTTGATCAAGTTAAACTCCAACAAGCAATTAAGAGCTTGTATGCCTCGACTAACTTCGAACATATC
GAAGTGAGTCGTGATGGCGGTGTATTGGTGGTCACGGTCAAAGAGAGACCGACAATCAGTACCGTGACATTTGAAGGCAA
CAAAGATATCAAAGATGAACAGCTTCAGGAGAGTCTGGATGGCTCCGGGGTCAAGGTCGGTGAGTCATTAGACCGTACCA
TGTTATCGGGTATCGAGAAGAGTCTTCAGGATTTCTATTATGGTGTGGGTAAATACGGAGCTAAAGTTGAAGCTCAGGTT
ATTAACTTGCCTCGTAATCGTGTAGAGCTAAAGTTCAACTTTACTGAAGGGTTAGCCGCAGAGATCAAACAGATCAACGT
CGTTGGTAATGAAGTCTTCTCCGATGCTGAACTTATCGGCATGCTGGAACTAAAAGACTATGTCGCCTGGTGGGATCTGT
TCGGTGAGCGCCGCTATCAGAAACAGAAACTTCAAGCCGATCTCGAGACGGTAAAATCTTTCTACCATAACCGAGGTTAT
ATTCGCTTCGATGTCACCTCGACACAAGTTGCGATGACGCCTGACCGTAAGGGTCTCTATATCACTATCAATGTCGATGA
GGGCGAGCAGTATAAGGTTACAGAAGTTAACCTGACTGGCGACCTGATGGGGCGTGAGAAAGTGATGAAGGGTATTCTTC
CTATTAAAGAGGGAGACATGTATAACGGTGCCGATGTGACATTTGCCGAAGAGATGTATGGCAAGTATCTGGGCCGTTTC
GGTTATGCCTACCCGGAAGTTAAGACCTACCCGGAAATTAATGATGAGACTAAAGAAGTTACTCTTAACGTTAATATTCA
ACCGGGTAAACGCGTCTATGTACGTAATATCAACTTTTCCGGTAACCAGGTCACCAAAGACGAAGTAATGCGTCGTGAGC
TTCGTCAGATGGAAGGTGCGTGGTTAAACTCGGCACAGGTTGAGCAATCTAAAGCCCGCCTGAACCGTTTAGGTTATTTT
GAAACCGTAGATACCGAAACGGTTCAAGTACCAGGTACCGATGATCTGGTCGATGTTGCCTTCAATGTAAAAGAGCAGCC
ATCGGGTTCATTTAATGCCGGTGTCGGTTATGGTACTGAATCAGGGTTGAGTCTGCAGTTTGGTGTTCAGCAGAGTAACT
TCTTAGGTACGGGTAACCAAGCGGGTATTAACCTAAATACTAACAAGTATTCAAAGAACGTGAATGTCTCTTATACCGAC
CCATACTTTACCAAAGATGGTGTTAGTTTAGGTGGTAGTATTTACTGGAACGAGTTTGACGCGCATGAGGCCAACCTCGA
GCGTTATAAGAACAGCTCTTATGGTATTGCGCTTAACTCTGGTTTCCCTATCAACGAAACCAATCGAATTAACGGTGGTA
TTGGCTATCGTCATAACTCGATCTCTGAGATCTCGGCTTATGAGCAGGCGCTGCGCTTCTATAATATCTACCGTGACTCA
GACGATCCGAATGCCGACCTGGCCTTCAATAACTTCGAGGCTAACTTAGGTTGGTACCGTAGTACGCTTAACCGGGGTAC
CTTCCCATCAGATGGTTCATCTCAGCGCTTGAGCACTAAGGCGACGATACCGGGTTCAGATCTGCAATACTTTAAGGCAG
ATTTTGATACCAGCTTCTACTTCCCAATCAACCGTAGTCACAGCTTTGTTATGTTGACTAAGGCTCGTGTTGGTTACGGT
AATGGTTATGGTCAGTTTAACGATAACGATCAGATATTACCTTTCTGGGAAAACTATTACTCAGGTGGTAGTAGTTCCTT
ACGTGGCTTCAAGTCTAACTCTGTAGGCCCACGTTCATTCTACCTGTATCGAGGTAGTGAGCCATGTTCTCCGGATCCTT
CGGGTTCGGGCTGTTATCTACCGGGCGATCCAAACCAAATTCAGGTCAGCGATGGTCGCTCAATTGGTGGTAATGCGATT
GCAACAGCCAGCATAGAGATGATTGTGCCAACGCCATTTTTGGATGAGGCTTATACCAATTCAGTACGTACCAGTTTCTT
CGTCGATGCCGGTAACGTATGGGATACCGAGTTTGATTATGACTCATACCGTTATCTTCCTGCACACGAGTTTGATAAGC
TTGAAGATTATGCCGACCCGAGCCGGATCCGCGCATCTGCGGGTATGAGCGTACAGTGGCTGTCACCGATGGGACCTATG
GTGTTTAGTCTTGCTTGGCCAATTAAGGAATACGAGGATGATGAGACTGAGATCTTCTCGTTCAATATTGGCAAAACTTT
CTAA

Upstream 100 bases:

>100_bases
TCAGATTTGGGGCAGCGATGCTGCTAATGTTGATGAGCATAGCGCTTTTCAACGATTTCTCCCGACTCTGAGCAAGACAC
ACACATAACTAGAAGCGTCT

Downstream 100 bases:

>100_bases
ATTAAAACTAAGTTAAATTAAGAATAATCGGCAAGTTTTGCTGAATTAAAGGAGTCTATTTTGAAAAAGATGTTTAATCG
CGCGATGATGGTTTTGGTTC

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>827_residues
MRFNKLFASMVLVGASLSGNGWAETFQPFEVTDIQVQGLQRVALGAALLTIPVKVGDTVDQVKLQQAIKSLYASTNFEHI
EVSRDGGVLVVTVKERPTISTVTFEGNKDIKDEQLQESLDGSGVKVGESLDRTMLSGIEKSLQDFYYGVGKYGAKVEAQV
INLPRNRVELKFNFTEGLAAEIKQINVVGNEVFSDAELIGMLELKDYVAWWDLFGERRYQKQKLQADLETVKSFYHNRGY
IRFDVTSTQVAMTPDRKGLYITINVDEGEQYKVTEVNLTGDLMGREKVMKGILPIKEGDMYNGADVTFAEEMYGKYLGRF
GYAYPEVKTYPEINDETKEVTLNVNIQPGKRVYVRNINFSGNQVTKDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGYF
ETVDTETVQVPGTDDLVDVAFNVKEQPSGSFNAGVGYGTESGLSLQFGVQQSNFLGTGNQAGINLNTNKYSKNVNVSYTD
PYFTKDGVSLGGSIYWNEFDAHEANLERYKNSSYGIALNSGFPINETNRINGGIGYRHNSISEISAYEQALRFYNIYRDS
DDPNADLAFNNFEANLGWYRSTLNRGTFPSDGSSQRLSTKATIPGSDLQYFKADFDTSFYFPINRSHSFVMLTKARVGYG
NGYGQFNDNDQILPFWENYYSGGSSSLRGFKSNSVGPRSFYLYRGSEPCSPDPSGSGCYLPGDPNQIQVSDGRSIGGNAI
ATASIEMIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYDSYRYLPAHEFDKLEDYADPSRIRASAGMSVQWLSPMGPM
VFSLAWPIKEYEDDETEIFSFNIGKTF

Sequences:
NA

Specific function: NA

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA