Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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The map label for this gene is dnaE

Identifier: 157376278

GI number:

Start: 3800129

End: 3803602

Strand: Reverse

Name: dnaE

Synonym: Ssed_3146

Alternate gene names: NA

Gene position: NA

Preceding gene: 157376279

Following gene: 157376277

Centisome position: NA

GC content: NA

Gene sequence:

>3474_bases
ATGTCTGATCCCCGTTTCGTGCATCTGCGTGTTCACAGTGACTTTTCTATGTCAGATGGTTTGGCGAAGGTTAAACCCAT
CATAGGGAAAGTAACAGAACTCGGCATGCCAGCTGTGGCACTGACCGATCAGACTAACCTGTGTGGCTTGGTCAAGTTCT
ATGGTGCCTGCCACGGAGCCGGGATCAAGCCGCTAATCGGCGCCGATTTTTGGGTCAAGGTGCCGGGATTTGATAAAGAT
CTGTGTTCTGTGACCGTTTTGGCTATGGATAACGATGGGTATTTGAACTTAACCTTACTTATCAGCGATGCCTATCTCAG
AGGTCATATAGATGATAGAGCAGTCATAGACCATGGGTGGCTAGCTAAATACAGTAAAGGATTGATCTTGCTCTCCGGTG
GCAGACTCGGGGATGTTGGGCGGGCACTGTTGAAAGGGAATCAGGCCCAAGTAGACTCATTAGTCGAGTTTTATCAGACA
CACTTTCCCGACCGATATTATCTGGAGTTATTGCGTACCGGTCGTCCCGATGAGGAGCGCTACCTGCATATGGCGGTAGA
GCTTGCTACTGAGAAAGGTTTACCTGTCGTCGCCACTAATCAGGTGGTCTTTAATAGTCCTGATCTGTTCGAAGCTCATG
AGATCCGTGTGGCTATCTCAGATGGTTTTACCCTGGCCGATCCTCGCCGTCCGAAGAAGTACAGCGCCGAGCAGTATTTC
AAGAGCAGTGAGCAGATGTGTGAGTTGTTTGAAGACATTCCCGAAGCGATTGATAATACGGTTGAGATAGCTAAGCGCTG
CAATGTTACCGTTCGGCTCGGCGAGTATTTCCTGCCTAACTTCCCTACAGGAGATCTGAGCATTGAAGACTTCCTGGTCG
AAGTGTCTGAGAAGGGGCTCGAAGAGCGATTAGAGTTTCTCTTTCCCGACCCTGAGGTGAGGGCTGAGAAACGACCTGCG
TATGATGAGCGTCTCGATGTCGAACTTAAGGTCGTTAACCAGATGGGGTTCCCCGGCTACTTCCTCATCGTGATGGAGTT
TATTCAGTGGGGGAAAGATCAGGATATTCCTATCGGTCCGGGTCGTGGTTCCGGTGCCGGGTCCCTGGTTGCATATGCCC
TCAAAATCACCGATCTCGATCCCTTGGAATATGAGCTGCTGTTCGAGCGATTCCTGAACCCGGAACGTGTTTCTATGCCG
GATTTCGATATCGATTTCTGTATGGATAGGCGAGATGAGGTGATCGACCATGTGGCCGAACTCTACGGCCGAGATGCGGT
ATCTCAAATTATTACCTTCGGTACTATGGCCGCAAAAGCGGTTATTCGCGATGTAGGACGTGTCTTAGGTCACCCTTATG
GTTTCGTTGACCGGATATCGAAAATGGTGCCAGCCGAGCCCGGAATGACTCTGGCGAAGGCGTTCGAGGTGGAACCTGCA
CTGCAGGAGTCATACGACGCCGATGAGGAGGTGAAAGACCTTATCGACATGTGCCGCACCTTAGAAGGTGTCACGCGTAA
CGCGGGTAAGCACGCCGGTGGTGTGGTGATCTCACCCACCACTATTACCGATTTTGCGCCAATTTATTGTGATGCCGAAG
GTCTTAATCCGGTGACTCAGTTCGATAAGAACGACGTCGAGACCGCCGGTTTAGTTAAGTTCGACTTCTTGGGGCTGCGA
ACCCTGACGATTATCGATTGGGCGTTGCAGATGATCAATCCCAAACTGAAGAGGCTGGGCAAAGATCCTGTGCGTATCGA
GTCGATTCCACTGGACGATCCTGCCAGCTTCAGGTTATTGCAGCGTTATGAGACGACGGCGGTATTCCAGCTTGAATCTC
GTGGAATGAAAGACTTGATTAAGCGTCTTCAGCCGGATTGCTTCGAAGATATGATCGCACTGGTCGCCCTGTTCAGACCA
GGACCGCTTCAATCGGGCATGGTAGATAACTTTATTGAGCGTAAGCATGGCCGTGAAGCCGTCTCTTATCCCGATGCTGA
ATATCAACATGAGTCGCTGCAATGGGTACTCGAGCCCACCTACGGCATTATCCTCTATCAAGAGCAGGTGATGCAGATTG
CTCAGGTTCTCGCGGGATACTCACTGGGTGGGGCGGATATGCTTCGCCGTGCTATGGGTAAGAAAAAGCCCGAGGAGATG
GCCAAGCAGCGTGGTACCTTCGAAGAGGGCGCGATTAATAATGGTATCGACGGTGAACTGTCGATGAAGATCTTCGATCT
GGTGGAAAAATTCGCGGGTTACGGGTTTAACAAATCTCACTCTGCGGCTTATGCTTTGGTTTCCTACCAAACTCTCTGGC
TGAAGACGCATTATCCGGCCGAATTTATGGCGGCGGTAATGTCTGCCGATATGGATAACACAGATAAGATCGTTATCTTA
GTCGATGAGTGTGAGCGCATGGGCATGCCTCTGCTACCGCCTGATGTTAACAAGGGACTGCTAAAATTCAACGTCGATGA
TGAGGGGAAAATTGTCTACGGCATTGGCGCGATTAAAGGGGTGGGTGATGGGCCGGTAGAGTCAATTTTGTCGGCTCGAA
AAGATGGTCCATTTAAAGACCTATTCGATTTTTGTGCTCGTGTGGATCTGAAAAAGCTCAATAAACGTATCATGGAAAAG
CTGATCTGTGCCGGAGCCCTGGATAATCTGGGCCCTCACCGCGCCGCTATGCTAGCAACTTTACCCGAGGCGATTCGGGC
GGCAGATCAAAATGCTAAGGCCGAAGCTATCGGTCAACATGATATGTTCGGTTTGCTCAATAGCGATCCTGAAGATGTGA
AACAGCAATTTGTTGAATGTACCCCTTGGCCCGATAAGGTGTGGTTGGAAGGCGAGCGGGAGACATTAGGCCTGTATCTG
ACGGGCCACCCGATTAATCAGTACCTGAAAGAGTTAAAGCATTATACGTCGGGACGCCTTAAGGATGTGCATCCTACCGA
GCGTGGCAAGACCATGAAGGCGGCGGGCTTAGTGGTTGCGACCCGTGTGATGATGACTAAACGTGGTTCTAAGATGGGGC
TTGTGACGCTTGACGATAAGAGTGCTCGTTTAGAGGTGATGCTATTTACCGAGGCGTTCGAGAAGTTTAATCACCTGCTG
GAGACCGACCGCATTTTAATCATCGAAGGTGAGGTGAGCTTCGACGATTTTTCCGGTGGGAACCGTATGACGGCCAGAAA
TATCATCGATATGGGTGAGGCCAGAAGCCATTTCGCCAAAGGTGTCGAGGTCGATATAGATGCAGAAGCTATCGATCTGC
CCTGGTTGGAGACATTTAAAGAAGCCGTTGAGCCATGGAAAAATGGTGCCGTGCCCGTGGTCGTTAATTACGCGCAATCT
CAAGCCAAGGCTCAGTTCAGGCTCGGTGAGAGTTGGCGGGTAAACCCGACCGATGAGTTGATGCTGGCGTTGGAGACCTT
AACGGGGGCCGGTAAGGTGAGGATCCTTTTTTAA

Upstream 100 bases:

>100_bases
AATTCATTTTTACTGTAACGAGTAAGCTAGCTTGGTGAGATTGACTCTGTTAATCTCACCTAAATCTGAGTTCTCCCCAA
TTTAAAAAGTAATAGGTACT

Downstream 100 bases:

>100_bases
GATGAGTGATCGTACCCCTGTCCCGGAATTTGATGCCAGCAGTTTAATTGCCGACTGTGTCGCTAAGGCGTCTGTCGGTT
CCGGCTCTCAGTTAGTGCTC

Product: DNA polymerase III subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1157_residues
MSDPRFVHLRVHSDFSMSDGLAKVKPIIGKVTELGMPAVALTDQTNLCGLVKFYGACHGAGIKPLIGADFWVKVPGFDKD
LCSVTVLAMDNDGYLNLTLLISDAYLRGHIDDRAVIDHGWLAKYSKGLILLSGGRLGDVGRALLKGNQAQVDSLVEFYQT
HFPDRYYLELLRTGRPDEERYLHMAVELATEKGLPVVATNQVVFNSPDLFEAHEIRVAISDGFTLADPRRPKKYSAEQYF
KSSEQMCELFEDIPEAIDNTVEIAKRCNVTVRLGEYFLPNFPTGDLSIEDFLVEVSEKGLEERLEFLFPDPEVRAEKRPA
YDERLDVELKVVNQMGFPGYFLIVMEFIQWGKDQDIPIGPGRGSGAGSLVAYALKITDLDPLEYELLFERFLNPERVSMP
DFDIDFCMDRRDEVIDHVAELYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKMVPAEPGMTLAKAFEVEPA
LQESYDADEEVKDLIDMCRTLEGVTRNAGKHAGGVVISPTTITDFAPIYCDAEGLNPVTQFDKNDVETAGLVKFDFLGLR
TLTIIDWALQMINPKLKRLGKDPVRIESIPLDDPASFRLLQRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRP
GPLQSGMVDNFIERKHGREAVSYPDAEYQHESLQWVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAINNGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAEFMAAVMSADMDNTDKIVIL
VDECERMGMPLLPPDVNKGLLKFNVDDEGKIVYGIGAIKGVGDGPVESILSARKDGPFKDLFDFCARVDLKKLNKRIMEK
LICAGALDNLGPHRAAMLATLPEAIRAADQNAKAEAIGQHDMFGLLNSDPEDVKQQFVECTPWPDKVWLEGERETLGLYL
TGHPINQYLKELKHYTSGRLKDVHPTERGKTMKAAGLVVATRVMMTKRGSKMGLVTLDDKSARLEVMLFTEAFEKFNHLL
ETDRILIIEGEVSFDDFSGGNRMTARNIIDMGEARSHFAKGVEVDIDAEAIDLPWLETFKEAVEPWKNGAVPVVVNYAQS
QAKAQFRLGESWRVNPTDELMLALETLTGAGKVRILF

Sequences:
NA

Specific function: NA

COG id: COG0587

COG function: function code L; DNA polymerase III, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA