Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 157376133

GI number:

Start: 3630106

End: 3631671

Strand: Reverse

Name: Not Available

Synonym: Ssed_3001

Alternate gene names: NA

Gene position: NA

Preceding gene: 157376134

Following gene: 157376132

Centisome position: NA

GC content: NA

Gene sequence:

>1566_bases
ATGAGCAATAGTGAGTACCTTTTAAGTAATCTAGACGATGTCATAAGCGTTAACTCTTCTTCTCTTTCAGAGTTGGCTCA
AGTAATTGACAAAAATTTAGGTTTTCTCAATATTGCTAAATCAAGAACTAGAATTCGGCCAGACCCTTTTCTTCCTCCAT
ATGGGGCAAAAAAGTTTTTCAATCCTATTGAAAAATATGATGAGAATATGCATCTGATTGCTTTTCTAGCAAAGCAAGCT
ATTTCTAATTCAAGAGTCAACACACAAGCATATAACTTGTTGGCCTCTAGCTTATATAATCTAAATATGATGCAACAAGT
TATAGAGGTTATTGAGTGTGCAGAGAAGTATGATATTTCCACTACTTTATTAAATGAGCTACAGAGCAAGGCCACTTTAG
AGCTTGGTATACGTGAAACAATCAACCAAAAATTTACACAATTAGGATACGAAAATGTTGAACAGTTTGAACATATGCAA
CTATCACCGTTCTTATCTTATAAAGGTTGGGCTAAAGAAATTAGTGGGAAACTCATAACAATTTGCGATACAAAAAATAC
TGTATCAAACATTTATCGGCATGCTCATCAGGATTTTGATGACGTAAAGGTACATACAAACAAAATAAGTGCAGAACCTT
TGGTTGGTATCCAAGTTAAGCAACTAAATATCCTTTTAGGTACTATTCCCTTTATCGATAATAAAGGGCTATATGAGTTG
GACTTACTACATAATCATCTGAAAAAACAATTGGTTAAAGTTGCGGACACAAGTTTACTTTATAACCCTGCACAGCTAGA
TAAGTATTTATTTAGCGGAAAGTATCTAATTTCTGCTGTTCCGAATAATTATTTTACAAATTACTTTCATGCTTTAATTC
AAGTTAGCTCTAGAATATTACTTACTATTGAGAACCCTGAATTCGATGATCATAAAATTCTCATGCCTGACAATACCCCC
AGGTGGGTGATAGAATTCCTCATTTTAGCTGGCGTTACGGAGTCTAGAATTGATATTATGCCAACAAATGGTATATCGAC
TATAGAACACGCAACGATCCTCCCTATGAATTGGGATGTATGCCCTAATGAAATAGCTGCATCACGAAGAGCATTATTGA
AAAATAATAGCTCATTAGCAGGCAAGAAAGATTATTACCTTATTCGAAAGGATGTTCAAAACTACACACGGGCATTGGTA
AATGAAGAAGAAATAATTGATGCCTGTAACCAGAGAGGTATTGAGGTTATTGATCCCCTTGATTATACCTTACCAGAACA
AATGCAACTATTTTCTAACGCTCGTACATTGATCTCTAGTGGGAGCTCATCAATTACCAACATGTTGTTTGCAGGTCCTG
AAACTGAGATCATTATTCTTGGCCCTCGCTTATTTTGGGGAATGTTATTTCCTGACATGGCAGCGGCATGCGGCCATAAT
TTTTCAGTTGTTTTTGGTGACTTTATCGCAGGTAACAACCATACAAAAAATCCTCATAATTTGTATGTCTCCGATGTTAA
ATCTTTTACTACTTTATTGGACGAGCATATTTGCAACAAATGGTAA

Upstream 100 bases:

>100_bases
ACTTGAATAGGCTTTCTCAACGCATGAGTTTTCTCAAGTTTTATGGTGAAGAAAGTTTGTTAGTCCCATGTTTTGATAAT
AGTATTACAGGAATTTATAC

Downstream 100 bases:

>100_bases
CAAAAAGGTAATCAGATAACACTAGATTGAGCAATAACTCTCTTAATAATATACCTTCAAAAGAATCTAAGATTAGCACT
AATTAAAATACACCCATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>521_residues
MSNSEYLLSNLDDVISVNSSSLSELAQVIDKNLGFLNIAKSRTRIRPDPFLPPYGAKKFFNPIEKYDENMHLIAFLAKQA
ISNSRVNTQAYNLLASSLYNLNMMQQVIEVIECAEKYDISTTLLNELQSKATLELGIRETINQKFTQLGYENVEQFEHMQ
LSPFLSYKGWAKEISGKLITICDTKNTVSNIYRHAHQDFDDVKVHTNKISAEPLVGIQVKQLNILLGTIPFIDNKGLYEL
DLLHNHLKKQLVKVADTSLLYNPAQLDKYLFSGKYLISAVPNNYFTNYFHALIQVSSRILLTIENPEFDDHKILMPDNTP
RWVIEFLILAGVTESRIDIMPTNGISTIEHATILPMNWDVCPNEIAASRRALLKNNSSLAGKKDYYLIRKDVQNYTRALV
NEEEIIDACNQRGIEVIDPLDYTLPEQMQLFSNARTLISSGSSSITNMLFAGPETEIIILGPRLFWGMLFPDMAAACGHN
FSVVFGDFIAGNNHTKNPHNLYVSDVKSFTTLLDEHICNKW

Sequences:
NA

Specific function: NA

COG id: COG4421

COG function: function code G; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA