Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 157376118

GI number:

Start: 3612206

End: 3613489

Strand: Reverse

Name: Not Available

Synonym: Ssed_2983

Alternate gene names: NA

Gene position: NA

Preceding gene: 157376119

Following gene: 157376117

Centisome position: NA

GC content: NA

Gene sequence:

>1284_bases
GTGCCTTCCGGAGTGCTCAACAATGCAAGTTGGCTTCTGCTCGAAAAAGGCTTGCTATTAGGCAGTGGCTTTCTATTTAC
TATCGTTTTAACACGGTATTGGTCTGTGTCGGAGTTAGGGGATTACCAGTACCTGTTAGCTTTAGTGGCGCTTCTGGTTC
CATTTTCTAATCTTGGGTTAAACTCACTGGTGAGTCGAGAGCTCGTGACCAGAGCCGAGCATACCGATGTGATTATGGGG
ACGGCTGTTGTTCTCAGGTTGCTAGGGGCGCTACTCGGCGGGGTCATATTTAGTCTACTATCGATTTGGTTGGTAGCTCC
CACCCTACAACCTCTATTTTTCGTCTTGTTATTCGCGCAATTATCCCATGCATTTGGGGTCTTCGATTACTATTTTGAAG
CAAAAGTACAATCGAGAGTTTCGGCAATTCTGAGGACCTGTGTAGGCCTTAGTTTTATGGCGGTTAAACTTTCATGTGTA
GTGCAAGGTGCTGACCTTTATACAGTATTGTTGCTTACCGTCGTAGAATGGGTAGTACTCAGTTTGATGTGGTTATTGGT
ATATCAGCTTTATCACAAGCGTCTCAAAGAGATGTCTTGGTGCTCTGCCCAAGCTCGAAGATACCTTAGTCGCTGCGGTT
GGCTAATACTCTCCAGTATCGCTGCAATCGTCTATCTAAAGATTGATCAAGTCATGTTAGGCTCTCTGCATTCCAGTGAA
TCAGTCGCTTTTTATAGTCTTGCGAGTCGATTATCTGAGGTCTGGTATCTGGTACCAGGAATCGTTGTAGCTTCATTTTA
TCCCTCTTTAATCAAAGCTAAAGAGCAGAATGAAGACTACCAGGGATCATTGCAGCGTCTATCTGATAGCCTTTGTTGGG
CCGCGATTACTATTGCGATTTTGATGAGTGTTATTGCTCCCGTTCTCGTGCCGTTGCTATTTGGTGATACTTACCTGCCT
GTAGTTGCCATATTGCAGATCCATATCTGGGCGGGCGTGTTTATTTTTATGAGAGCGTTATTTAGTAAGTGGCTCCTCAT
TGAGGATCTACCCAAATATTCTTTGGTTACCCACGGAAGTGGCGCCATTATTAACTTATTACTGAATAGCCTACTCATAC
CTGAGCATGGTGCGTTAGGTGCAGCTTGGGCTACGCTGGCATCCTATGCGGTGGCTTCATATTTAGGTTTGTTTATTTTT
CCTAAGACCCGCTGTATGGGAGTGTTGATGACGTACTCCCTATTGGCACCTGTGTGTAGGTTTAGATTGAGAAAGAGGGG
CTAA

Upstream 100 bases:

>100_bases
GCACTGTATGAGTCTATTGGAACTGATAAAAGAGGCTAATGAAAAACATTGGTATTGTTAATTGAACAATAAAAAATATC
TTAGTGGACTATCTAAGTTC

Downstream 100 bases:

>100_bases
ACTCCTCTTGTCAACGTACTCATTGCCGTAGTGTTTTATGTTCTAACCACGAGTACGCATATGCGTGGTCAATAGTGTAA
ATTGACACATTTTTTTGAAT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>427_residues
MPSGVLNNASWLLLEKGLLLGSGFLFTIVLTRYWSVSELGDYQYLLALVALLVPFSNLGLNSLVSRELVTRAEHTDVIMG
TAVVLRLLGALLGGVIFSLLSIWLVAPTLQPLFFVLLFAQLSHAFGVFDYYFEAKVQSRVSAILRTCVGLSFMAVKLSCV
VQGADLYTVLLLTVVEWVVLSLMWLLVYQLYHKRLKEMSWCSAQARRYLSRCGWLILSSIAAIVYLKIDQVMLGSLHSSE
SVAFYSLASRLSEVWYLVPGIVVASFYPSLIKAKEQNEDYQGSLQRLSDSLCWAAITIAILMSVIAPVLVPLLFGDTYLP
VVAILQIHIWAGVFIFMRALFSKWLLIEDLPKYSLVTHGSGAIINLLLNSLLIPEHGALGAAWATLASYAVASYLGLFIF
PKTRCMGVLMTYSLLAPVCRFRLRKRG

Sequences:
NA

Specific function: NA

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA