Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157376000

GI number:

Start: 3466109

End: 3472750

Strand: Reverse

Name: Not Available

Synonym: Ssed_2865

Alternate gene names: NA

Gene position: NA

Preceding gene: 157376001

Following gene: 157375999

Centisome position: NA

GC content: NA

Gene sequence:

>6642_bases
ATGAATTTCATTACCCGGTTTTTTTCTTTTCTGCTTCTTCTATGTATCACAAGCGCATTTTGTAATGCAGAAACTATAAA
GGTTGGGTTTGGTTATGGAAAGCCTCCCTTTGTATTTGCATCAACCCCAGAGGGACAATCAGAACCGAGAGGAATAGAGG
TTGATATTATGCGTGAAGCACTCGCTTTGCGCGGACATGATTTGGAAGTTCACTACTTCTCTAATAACAATCTTGTTGAA
CAGTTGCGGCAGGGAAATATTGATGCGGCTACAACTATTCCTTCTGAACAAAATTCATCTGTTTACTATTCTAATCAAGT
TATCTACTTCTGGAATTATGCGGTAACGCAACCCGAAGACAGAACCACATTATCTTCTATCGATGAGCTGAAGAGCAGGA
AAGTGCTTTCATGGCAAGGTGCCAGTAAAGACCTGGGTAAAAGCTTTGAACAAGCCATTCCACAAATGAACTTTTATCGC
GAGGTCGAGGATCAATCAGAGCAAGTATTACTGTTCTTACAAAAAAAGGCTGATACGCTCGTTATTGACTGGAGTATTTT
TTCGTATTGGGCGCGGTATTTTGGTTATGAGCCGGAACGCTATAATCAATACAATATTTTTGGCGGTAAGACTTGGTTTT
CAGTTGGATTTTCAGATAAATCATTGAGAGATGACTTCAGTCAGGGGCTATCACAATTAAAATCAAATGGGCAATACCAG
AAAATTTATGACCGATTATGGTCAGCCAGTAATCTGGAAGATAACAGTAATAAGTCAGTGCTTCATTTGACAGCAGATGA
ACAAACTTGGTTGGATAACCATCCTAACATCCGTTTGGGTATTGACCAGAACTATCCGCCTTTTGACTTCATTGGAGATA
GAGGCAACTATTCCGGGATCTCTGCGGACTACCTTGCGCTGATTAATGAGCGCCTTGGGACTGATATGCGTGTCATTTCT
GGCTTGAATTGGACTGATGTCATTGCGGGGGCTCAGAGCGGCGATATTGATGTCATCTCCACAATTGTGGAAACGAAAGA
ACGAAGTGCTTATCTTAACTTTACTCGCCCCTACATTAGCTTTCCGACTATTTTTTTGACCAGGAAAGATCAAGAGCCAG
TGAATGCTTTTCATGATTTGAACCGTGGAAAGCTGGCAATGGTGAAAGATTTTTTTTATGAGGAGATGATCCTTAAAAAC
TATCCGGAAATAGAGCCATATTTTGTCAACTCTCCTTTAGAAGCAATACGAGCTCTAGATAACGGTAAAGTGGATGCTGC
AATTGTTAATTATGCCGTGGCTAACCACCTTATTCTGAAATATGACTTAACCTCGATTAGAGTTGATGCTGAAACGCAAC
TTGAAAGAACATTTTTTAGTTTCGGTGTTCGTAAAGATTGGCCTGAACTTCTCTCTGTCCTTAATAAGGTGCTCGCTTCT
ATCGATGAGGAAAAACATAAGCAGATAACAGAACGATGGATCGCTAGACCTTCAACTGTAAGCCAAGTTACTGATGAAAT
TGACTTAACTGCTAAAGAAAAAGCATGGGTTGCAAGCAATCCTGTTGTACGAGTCTCAGGAGATATTAGTTGGCCACCAT
TTAATTTTAAAAGGAATGGTGTGACACAAGGGTTCTCTATCGACTATATGAACCTGATAGCGAAAAAGGCAGGGCTATCT
ATTGAATATGTTGAAGGGCCTACATGGGGGGAATTTCTGCTGATGATGAGAGATGGCTCTCTCGATGTTATGTTAGATAT
TGTTAAAACCCCTGAGCGTGAAAAATACTTACTTTACACTAAACCCTATGCTGATAACCCCAATGCGATCCTGAGCAAGA
AGAGTATGCCTTATCGCTCTTTAGAAGCCTTGTTTGGCAAAACGGTTGCGGTTACTAAGGGATTTTTTTATGAAGAGATT
TTGAGTAGAGAATATCCACAAATTAAAATACTTCCTCTTGAGAATACATATCAAACCATGATTGCTGTCAGTGTTGGGGA
AGCTGATGCAGCCTTGGGGGAGATGGCAGTACTGAATCACTTTATCTCTGAAAGCCTGATGACCGATGTTTCTGTTTCAA
GTGAAATTAAGATTGGCGATCACGAATTGAGCCTGCTCAATATCGCCACGCGCAAGGATCTTCCATTATTGATTTCTATC
TTGAGAAAAGGTGTGGAATCTATAAGCCAGAAAGAGCTAAGTTTAATTAAAAATAAGTGGCTTGCTAGTGCTTCAGTTGA
ACAGAGTGTAGATGCTCCTGTATCGAAACTGTTTAAACAGTATTTTTCGGTATATCCATTGATAATCATTGCAGTATTCA
CCTTTATAGTTTTGACAGTTACGGCATTCCTGCTTCCGAAACTATTATCTAATGAAGTTATTGCTAAATTTGTGGCTTCT
CGGGCTTTTACTTATTCAATGATGCTGCTCACCAGCATCATTGTATTAATCGTCTTACTATTGGTTTGGTATACCCTTGA
ACAAAACAGGCAATCAACATTAAGCGATACAAAGGAAGATTTGACGTTTATTCTTGAAAGAACTTCAGAAAACCTAGACA
CCTGGATTAATGATCGAAAGCGATATCTGTCTAGATTAGGAGAGCACCCTGAGTTAGTTGAGCTTACGCAACACTTATTG
TCTCTGCCTGCAGAAAAGCGTGTATTGAAAGATGACAATATACAGGGGGATATCCGTTCGTTTTTCGAACGTCATGTAGA
GGATTTTGGTCATGTTGGTTTTTTCCTTATTAATAAGGATAGGATTAGCATCGCTTCACGTAGAAACATTAACTTAGGCT
CGAAAAACCTGATTGCAATCCATGCGCCGGAGTTGCTCGATCGAGCCTTTAGTGGTGAAACGGTATTTGTGCCACCTATT
CCATCCGATGTTAAAGTCGGTGAGTACAGCTCAGGTTTCTCGAACCTGAATGCCTTAAGCATGTTTTTTATCACGCCGGT
AAAAGATCATACAGGAAAGGTTTTTGCGGTTCTTACCCAGCGCTTATTACCTAGTGGCCGCTTATCCCAAATCTTGCAAC
AAGGAAGTATTGGCCGTTCCGGAGAGAGCTATCTAATCAATCGAGACGGTGGAATGGTCACCGAAAGCCGCTTCAAAGAC
TCACTGGTAGAAATTGGGCTGCAAAGCATAGATTCAGAAGGTGAATCATTTTTAATGCTGAAGGATCCAGGTGGCAACAT
GACAGAGGGCTACTTGCCAGAACGTTCTTTTACTGAGTTACCTTTCACATTTATGACGCAAGCGATTATCAATCAGGCAC
AGCAAGCAACCGGAAGGGCAAATATTCAGTCTAATATCGAGGGGTATCGCGACTACCGAGGAGTTGCTGTATTGGGAGTT
TGGCGCTGGGATAGCAGACTTGGTTTAGGGGTAACAACTGAGATTGATCTCCAAGAGGCACTTGACGCATTTTATCAAAT
GCGTATTCACCTGATCACAACGGCAATAGTTGCGCTATTGCTGGCGATTGCCTCTAGTATGCTCACTGTAACTATCGGGC
AACGAGCCACTACTTTTATGCGAAGGTCCAATGAGGAGCTTGAAGAGCGGGTTAAAGAGCGGACGATGAGACTACGCAGT
ATTATCGAGAATGCTGCGGACGGTATAATCGTGATGAATAGTAGAGGAATTGTTCAAAATTTCAGTCCTGCAGCTGAAAC
AATATTTGGTTTTTGTGCTTCAGAGGTTGTCGGCAACAATATAAAAATGCTTATGCCTGAACCAACACGAAAAGAACATG
ACGGTTATTTAAAGCACTATATTGATGATGTCAAAACCAAAGTTGTAGGTAAAACAAGAGAAGTTGTCGGCCTGCGTAAA
AATGGCGAAACCTTCGACATGGATCTTGCGGTAGGTGAGTTCTTCATAGACGGTGAACACCTATTCACAGGAATGGTTCG
TGATATTACCGAACGAAAGCGCATGGATAAGGAGCTACGTTTATCTAAAGAAGATCTTGAAAAAACGCTGTATGAAAAAA
CGAGCTTGGAGGAGAAACTTAAGCAAAATGTGGCCTATATGACTACTTTGCTTGAGAATTTACCGATAGCCGTTTTTGCC
AAGGATGTTAAAAATGACTATCGTTTTACTCTGTGGAATCACGTCGCTGTAGAAATTTTTGGATTTAAATCTGGGCAAAT
AATTGGCCGCAATGATTATGATCTATTTTCAACTGAAGAAGCTAATCATTTTCGTCGTACAGATGAAGAGATCGTTAAAC
ATCTAGGCATCAAGGATATACAAGAAGAGACAATAACTACTTCTCATGGAGAACGCATTCTTCATACGGTAAAAGTGGCG
GTTCCTAACGAAAGCGGTGAATCGAATATCTTATTAGGCATAACCCAAGATATTACTGATCGTAAGCAGGCTGAAGAAGA
GCTAATGAGAGCGAAGCGGGTCGCCGAAAATGCAACAAGAGCAAAATCCGACTTCCTGGCTAATATGTCTCATGAGATCC
GAACTCCAATGAATGCCATTATTGGTATGAGTCATTTAGCTCTTCAAACCGGGCTAGACCGTAAACAGCGTGACTATATC
AATAAAATTCAAAGTGCTTCTGAATCCTTACTTGCTCTTATCAATGACATCCTCGATTTCTCGAAGGTCGAGGCGGGAAA
AATGGAAATTGAGAGAAAGCCGTTTAACTTGAATGATACCTTGGATAAGTTGGCTCAACTCATAACGGTTAAGACTCGTG
AAAAGAAATTGGAACTGCTGATAGATACTCATAAAGACGTTCCTTGTGGGCTGATAGGTGATTCGTTACGACTCGGACAA
ATTCTTATTAATCTGACTAACAATGCCGTTAAATTCACCGAGAAGGGGGAGGTTGTTGTCAGCATTGAGAAGGTATGTGT
TGATGATGAACAAGTGACCTTAAAGTTCACTGTTAAGGATACCGGCATTGGTATGACAAAGGAGCAAATGGGTAAATTGT
TCCAGTCCTTTAGTCAGGCGGATGCTTCCACGACCCGAAAATATGGTGGTACCGGTTTGGGTCTGACCATCAGCAAAAAA
CTGACGGAGTTGATGGGAGGGGCAATAAGTGTTGAGAGTACTTTTGGAAAGGGGAGTAGCTTTGTATTTACTGCTAACTT
CGGCCTTTCACAAGCAGCAGAAGTCGTCAGCCAGTTACCTAAGCCTGATTTACGGCATCTGCCCATACTTATTGTTGATG
ACAGCCCTGTTGCTCGGCAGATATTACGTCAAAATGGCGAGGCACTCACGTTTGTTGTTGATGAGGCAAGTAGTGGTGAA
GAAGCTATTGAAAAATTACATGACTACGACCAGTTGGGGACTCCTTTTAAAGTCGTCTTCATAGATTGGAAAATGCCGGG
CATGGATGGAGTAGAAACTTGCCATCGAATCAAATCTGAAGAAAATATCGAGAGTCCTCCAAATATCGTTATGGTTACAG
CCTATGATCGGCATGAGTTGATACATGAAATGGAAGGTATGGAGGTCAGTGGAGTTTTAACTAAGCCAGTAACTCAGTCC
AGCATGTTGGATGCCACTATGGTTGCTATGGGATATGAAGAGGCTAAACGAGATGAACAAGCATATGATCTAGGCTTGGA
TGCGGCGAAGGCAATAAGGGGAACACATGTATTACTTGTTGAAGATAATGACATAAATCAACAGGTTGCTACTGAGTTGC
TCGAAATGGCGGGCTTAGTAGTGACAACAGCCTCTGATGGACAAGAAGCATGTGAAAGAGTGAAAACCGAGTTATTCGAC
GTGATACTCATGGATATTCAAATGCCTGTAATGGATGGTTATACCGCGACACGACATATCCGTAAATTTTCAGGTTATGA
AGAACTCCCTGTAATAGCTATGACTGCAAATGCTATGGATGGAGATCGTGAAAAATGCCTGGATGCCGGTATGAATGATC
ATATAGCTAAGCCAATAGACCCTGCTTCGATGTTTGCCGCGCTGGTTAAGTGGGTAACTCCTCAAGAGGGGGCTGATGAG
GTATTTGTTCCGGATGCGAGTGTTAGTGATGCTGAAGTGAAATTGCCAGAGCTGCCCGGTGTGAACCTGGAGTTGGGATT
GATGCGAGTAGCCGGAAAACATAAACTTTATCTCGATCTGATGAAGCGGTTTGTGGCCGAACAATCGAATGTCCCTATGC
GTATAGAGCAGGCTCTGGCCACTGGTGACATCATGCTTGCTGAGCGCCTTTCCCATACTATCAAAGGTATTTCAGGTACT
CTTGGCGCAATAGAGCTGCAGGAGTTGGCTGCGAAATTGGAAACAGCAATTCAGGCAGAAGACGAGAATCAAATCGCAAC
GGTTATGCCTGCATTCACAGGTGAGTTGGAACGTTTGGTGGAAGCTATAAGAGTCAAGACTGTCGAAAAACAGGAACAGG
TAACTCATATTCCACTCACCGCTGAGGAACGTAAGAAGACTCTTGATGTTCTTATTAATATTAGAGATTTACTGTCTAAT
GATGATGGCGATGCGTTAGATATCTTTTCTGAAAATCACGAACAGTTGTCTATACTGGTAGAGCCAGAGGAGTTGTCTCG
ATTGGAAAGTACCATTGAAAGTTTTGATTTCCAGGGAGCGATAACTGTTGTAGATGATTTACTCAAAAATGCCGAGGAAT
AA

Upstream 100 bases:

>100_bases
ACCATAGACAAAATTGTTAATTTGCAAGGCCGTACCTTGAGGAAACAAGTGGTTAAAAAGGATTTTCTCTGTATATAGTA
AAAACATCAGAGGTTGATAT

Downstream 100 bases:

>100_bases
TGTGATGAATGCAAAACCAACGCTTCTGGTTGTTGACGATACCCCTGCCAACATTTCTCTGCTGCGTGAAATTTTGAAAG
ATCAATATAAGGTAAAAATT

Product: Signal transduction histidine kinase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>2213_residues
MNFITRFFSFLLLLCITSAFCNAETIKVGFGYGKPPFVFASTPEGQSEPRGIEVDIMREALALRGHDLEVHYFSNNNLVE
QLRQGNIDAATTIPSEQNSSVYYSNQVIYFWNYAVTQPEDRTTLSSIDELKSRKVLSWQGASKDLGKSFEQAIPQMNFYR
EVEDQSEQVLLFLQKKADTLVIDWSIFSYWARYFGYEPERYNQYNIFGGKTWFSVGFSDKSLRDDFSQGLSQLKSNGQYQ
KIYDRLWSASNLEDNSNKSVLHLTADEQTWLDNHPNIRLGIDQNYPPFDFIGDRGNYSGISADYLALINERLGTDMRVIS
GLNWTDVIAGAQSGDIDVISTIVETKERSAYLNFTRPYISFPTIFLTRKDQEPVNAFHDLNRGKLAMVKDFFYEEMILKN
YPEIEPYFVNSPLEAIRALDNGKVDAAIVNYAVANHLILKYDLTSIRVDAETQLERTFFSFGVRKDWPELLSVLNKVLAS
IDEEKHKQITERWIARPSTVSQVTDEIDLTAKEKAWVASNPVVRVSGDISWPPFNFKRNGVTQGFSIDYMNLIAKKAGLS
IEYVEGPTWGEFLLMMRDGSLDVMLDIVKTPEREKYLLYTKPYADNPNAILSKKSMPYRSLEALFGKTVAVTKGFFYEEI
LSREYPQIKILPLENTYQTMIAVSVGEADAALGEMAVLNHFISESLMTDVSVSSEIKIGDHELSLLNIATRKDLPLLISI
LRKGVESISQKELSLIKNKWLASASVEQSVDAPVSKLFKQYFSVYPLIIIAVFTFIVLTVTAFLLPKLLSNEVIAKFVAS
RAFTYSMMLLTSIIVLIVLLLVWYTLEQNRQSTLSDTKEDLTFILERTSENLDTWINDRKRYLSRLGEHPELVELTQHLL
SLPAEKRVLKDDNIQGDIRSFFERHVEDFGHVGFFLINKDRISIASRRNINLGSKNLIAIHAPELLDRAFSGETVFVPPI
PSDVKVGEYSSGFSNLNALSMFFITPVKDHTGKVFAVLTQRLLPSGRLSQILQQGSIGRSGESYLINRDGGMVTESRFKD
SLVEIGLQSIDSEGESFLMLKDPGGNMTEGYLPERSFTELPFTFMTQAIINQAQQATGRANIQSNIEGYRDYRGVAVLGV
WRWDSRLGLGVTTEIDLQEALDAFYQMRIHLITTAIVALLLAIASSMLTVTIGQRATTFMRRSNEELEERVKERTMRLRS
IIENAADGIIVMNSRGIVQNFSPAAETIFGFCASEVVGNNIKMLMPEPTRKEHDGYLKHYIDDVKTKVVGKTREVVGLRK
NGETFDMDLAVGEFFIDGEHLFTGMVRDITERKRMDKELRLSKEDLEKTLYEKTSLEEKLKQNVAYMTTLLENLPIAVFA
KDVKNDYRFTLWNHVAVEIFGFKSGQIIGRNDYDLFSTEEANHFRRTDEEIVKHLGIKDIQEETITTSHGERILHTVKVA
VPNESGESNILLGITQDITDRKQAEEELMRAKRVAENATRAKSDFLANMSHEIRTPMNAIIGMSHLALQTGLDRKQRDYI
NKIQSASESLLALINDILDFSKVEAGKMEIERKPFNLNDTLDKLAQLITVKTREKKLELLIDTHKDVPCGLIGDSLRLGQ
ILINLTNNAVKFTEKGEVVVSIEKVCVDDEQVTLKFTVKDTGIGMTKEQMGKLFQSFSQADASTTRKYGGTGLGLTISKK
LTELMGGAISVESTFGKGSSFVFTANFGLSQAAEVVSQLPKPDLRHLPILIVDDSPVARQILRQNGEALTFVVDEASSGE
EAIEKLHDYDQLGTPFKVVFIDWKMPGMDGVETCHRIKSEENIESPPNIVMVTAYDRHELIHEMEGMEVSGVLTKPVTQS
SMLDATMVAMGYEEAKRDEQAYDLGLDAAKAIRGTHVLLVEDNDINQQVATELLEMAGLVVTTASDGQEACERVKTELFD
VILMDIQMPVMDGYTATRHIRKFSGYEELPVIAMTANAMDGDREKCLDAGMNDHIAKPIDPASMFAALVKWVTPQEGADE
VFVPDASVSDAEVKLPELPGVNLELGLMRVAGKHKLYLDLMKRFVAEQSNVPMRIEQALATGDIMLAERLSHTIKGISGT
LGAIELQELAAKLETAIQAEDENQIATVMPAFTGELERLVEAIRVKTVEKQEQVTHIPLTAEERKKTLDVLINIRDLLSN
DDGDALDIFSENHEQLSILVEPEELSRLESTIESFDFQGAITVVDDLLKNAEE

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA