Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157375887

GI number:

Start: 3319397

End: 3321607

Strand: Reverse

Name: Not Available

Synonym: Ssed_2752

Alternate gene names: NA

Gene position: NA

Preceding gene: 157375888

Following gene: 157375886

Centisome position: NA

GC content: NA

Gene sequence:

>2211_bases
ATGTCTATTTTTAAACCGTTTACTTTTAAACCATTTACTTTTAAATCACTTAGTTTCAGATCTGATACGTTAAAACGCGT
ATCACCAGTCGCACTTGCCATCTCTACGGCATTGACCAGCGGCTATGCCTTCTCTGCCGAACCAGCCAATGAACCTACCA
CCTCCGATGAGATGGAAGTGATTGTGGTTACTTCCGATTTCAGAGGCGCTTCCTTAGACAAAATGCCGTCGAGTATTACC
GTTATCGATCAACAGCAGATTGAGGATGAGGGGGCTCAGCATTTTGAAGAGGTGCTCAACTCGATTGCTAACTTCAACTG
GTCCGGTGGAAGTTCGAGACCTAAATACTTCCAGATCCGAGGTGTCGGAGAGCAGGAGGAGTATCAAGGGGCACCTAATT
CTTCGGTCGGTTACATCATCGATGATATCGATATGTCCGGTCTTGGCATGATCTCCAGCATGTATGATCTTCAGCAGGTT
GAAGTGCTTCGCGGCCCTCAAGGAACGCGCTACGGTGCTAACGCATTAGCAGGCTTAATCTACCTTAAGAGTAATGATCC
CACCGATGTCTTTGAGCATGGCGCCGAAGTGTCGATGGGTGATGATGACCTCACTACATTCAGTGGTTTTAGCTCGGGTC
CATTGACTGATTCGGGCAAGTTACTCTATCGGGTATCTTTGCAGCAACATAAACAAAACGGCTATAGAGATAACCTCTAC
CTGGGCCGGGATGATACCAATGGGCGTGATGAGTTTACCGGACGTGCCAAATTACGCTGGTATGCGACCGACCATCTTGA
GCTCGACCTTACCCTGCTTCATGCCGATTATGATAATGGCTACGATGCCTGGACATTAGATAACAATGGCTTCGATACGC
TCACCGATGAGCCCGGTGTCGATAAACAGCGCACCACAGGTAGCTCGCTGAAGATGACCTATTCCGGAGCCGAGTCATTC
GAGCTCGTCTCTTTGACCTCTTATGCGCAAACTCAGCATCATCATGGTTACGATGGCGATTGGGCTAACCCGGATTATTG
GGGGGATCTGACCTGTTATGGCGAGGCTTGCCAATATGACTACACCTGGAACAAAGAGGGTGAACGCAAATCCGTTAGCC
AGGAGTTCAGACTGAGTTCAACCGAAGCCGGACGGATCTTTGCCGGGAGTACCGACTGGTTAGTGGGTCTCTATGGCATG
AAACTCGATGAAGATAACGACACATTAGAGATCTATAACGGTTGGGAAGATCCGTTAACGGCAGAATATGAGGCTGAAAA
TCTGGCCGTCTTTGCTCAAATAGACTCAGACTTAGGCAATGATTACTCCCTCTCTGTTGGTGCCAGAGTCGAGAGCCGTG
ACAGTGAGTATGCCGATAGTGCCGGCGATGCGTTTAACCCGAGTGAAACGATGTGGGGCGGGCATATTGCTCTGAGTAAG
GCTATAAGTCTCACTCAGCAGGCCTATGTCAGAGTCGCGCGTGGTTATAAGGCGGGTGGCTTTAATATGTCGCTGCCAAC
CGAGCTGTCGGACAAGAAAGAGTACGATACCGAGACCCTATATAACTATGAAATAGGACTTAAATCCAACTGGTTAGAGG
GGCAGGCGTCAACCAATTTATCATTTTTCTATATGGACAGACGTGATCAACAGGTGTCGGCCTCACAGCAGAACCCTGAT
GAGCCACAGAAATTCATCTTATATACAGAGAACGCGGGAAGCTCGCACAATTATGGAGCCGAGTTAGAGGGGAACTGGTA
CGCGACTGATAATCTAAAGCTTTATGCCACTCTGGGCTGGCTTGAAACTGCCTATGGTGATTATGAGTATCAGGATAAGT
ATGGCGGAACCGTCGACCTGTCGGGCCGTGAACTCGCTCATTCTCCTAACTTTACCTATAGTGCCGGTGCCACCTATCGC
ACCGATTCAGGCTGGTTCGCTAACCTGACGACCAGTGGTAAGAGTGATTTCTACTACTCAGACAGCAACGAGTCTAAGTC
TGATGCCTATACTATCTTTAATGCGCGTATGGGTTATGAGACCGATCTCTGGTCAGCCTACCTGTGGGGGCGTAACTTGT
TTGATGAACAATATGGCACCCGTGGCTTCTACTTCGGGAACGAGCCGGATCAGGATTGGGCCGATAAGCAATATATTCGT
TATGGGGATCCGCGCCAGTTAGGATTAACCGTTAACGTCAAGTTTATGTAA

Upstream 100 bases:

>100_bases
CTAATACCGGCGTAGGAATGGGCCAATAAGTACAATTGTATTTGTACCACCTTTCTCGCTTTTCCAGTTGCCGGATCTCA
AAATATTAATTTGGGGTCCT

Downstream 100 bases:

>100_bases
TTTACTACCTGCGGGATTAAATTGCTAAAACATGTGCAAGCAAACAAGAAATTAACTTAATTGTGGCGGTTTTCTTCTTA
TAAAGAGGGCTGCCTGAGGT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>736_residues
MSIFKPFTFKPFTFKSLSFRSDTLKRVSPVALAISTALTSGYAFSAEPANEPTTSDEMEVIVVTSDFRGASLDKMPSSIT
VIDQQQIEDEGAQHFEEVLNSIANFNWSGGSSRPKYFQIRGVGEQEEYQGAPNSSVGYIIDDIDMSGLGMISSMYDLQQV
EVLRGPQGTRYGANALAGLIYLKSNDPTDVFEHGAEVSMGDDDLTTFSGFSSGPLTDSGKLLYRVSLQQHKQNGYRDNLY
LGRDDTNGRDEFTGRAKLRWYATDHLELDLTLLHADYDNGYDAWTLDNNGFDTLTDEPGVDKQRTTGSSLKMTYSGAESF
ELVSLTSYAQTQHHHGYDGDWANPDYWGDLTCYGEACQYDYTWNKEGERKSVSQEFRLSSTEAGRIFAGSTDWLVGLYGM
KLDEDNDTLEIYNGWEDPLTAEYEAENLAVFAQIDSDLGNDYSLSVGARVESRDSEYADSAGDAFNPSETMWGGHIALSK
AISLTQQAYVRVARGYKAGGFNMSLPTELSDKKEYDTETLYNYEIGLKSNWLEGQASTNLSFFYMDRRDQQVSASQQNPD
EPQKFILYTENAGSSHNYGAELEGNWYATDNLKLYATLGWLETAYGDYEYQDKYGGTVDLSGRELAHSPNFTYSAGATYR
TDSGWFANLTTSGKSDFYYSDSNESKSDAYTIFNARMGYETDLWSAYLWGRNLFDEQYGTRGFYFGNEPDQDWADKQYIR
YGDPRQLGLTVNVKFM

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA