Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157375703

GI number:

Start: 3117755

End: 3119896

Strand: Reverse

Name: Not Available

Synonym: Ssed_2568

Alternate gene names: NA

Gene position: NA

Preceding gene: 157375704

Following gene: 157375702

Centisome position: NA

GC content: NA

Gene sequence:

>2142_bases
ATGAAAAAATTAAAAGGTTTTGCAGGCAAAATCCTGCACATTGATTTAAATAATCTGACACATCATATTTTGCCGACGGA
GGATTATTATGAATGGGGCGGTGGCCACGGATTTGGCGCTAAATTGTTTTGGGATCTGTGTGAAGATATCGAAGCCGTGA
CCGATGGTCGCGACCCGCGTAACGTCATCACTATCGCGGGTTCACCCTTTTCAGGGACGAATGTTCCCTCTGCCGGTGGC
CGTTGTGAAGTGACGAACATGTCGGTGGGTTTGATCCCCCGTAACCGGTTCACCCGTTCCAACTTTGGCGGTCATTTTTC
CTCTATGATGAAGCATGCAGGCTGGGATGCGGTAACCGTCACTGGTAAAGCACCCTATCCCGTCTATATTGATGTGCGCA
ATGACCATGTGATGATCCGGGAAGCCAGCCATTTATGGGGTAAAGATACCCATGAAACCCAGCAAATTATTCAGGAGGAT
GTTGCCAGTGTCGAGGTGACCTCCGGCTGGAGTGGCCAATTAGACGGCAACAGCTTTGGCCGTACTACTCAAAAGGCCTC
GGTGTTAACTGTAGGCCAGGCTGGTGAAAATCAATCGGCACTAGGCTGCCTGATCCATGGCGCGGGTAATGCGGCAGGTC
AGGGCGGAAGCGGTGCGGTATTTGGCTCAAAAAACCTGAAGGCAATCAGCTTCATCGGCACGGGGGCTGTAGAAATTGCC
GATCCTGAAGCCTTGATAAAAGCTCGTTTTATAACCCGTGACTTTTACGCTGCGGATGTTGACAAATCAGCAGCATTTGC
CTACCCCAGTTTGGGAGGGAAACCCGAAGCCGTCACTTTTTCTACCATGCCAACAGGGCACCGGGTGTCTTCATGCCATG
GATGCGTTAATGGCTGTAAACAACGTAACGCCATCGGCTATGGCAATGAAGTCACCTGTCAAACCTCTCTTTGGTACCTT
GGGGCGGTACGTTCCTATAAATTTGGCGGGGATGCCAAGCTTAGTCTGTCCAACAGGGGGTTAGAATTAACCGAAGATAG
CCTTTATGCCGGGGATTTGGCCAACAAACTGGGGATCAACACTTATCCAATTATGGGGCTCATACCATGGCTGCAAAAAA
TGCATGCCAAAGGGGAGTTAGGTTCAGGCAAAGAGATCCATAGCGAACTACCCTATGAGCTCTTGGGGACCAGAGAATTT
GCCGAGCAGTTCTGTCAAGCCATTGCGACGGGGACCGATATTGGCGCTCATTTTATTGATGGTATAGTGCCTGGTATTGA
ATCGTTAGGGCATGGCGCAGATGTTGATAATGGCACACTTCACTACCCTTACTATGGCATGCCGGAACACGGTTATGATC
CTCGCGCAGAACTGGAGTGGGGCTATGCTACGTTAATGACCGATCGGGACATGAACGATCACGGCTTAAATTGGATCTAT
TGGACCGTTAATCTTGCCAAACTGGAAGGTATTAATTTCCCGATCCCTGCTGAGACATTGGTAACGCGGTTTGTTGAAAA
AATGGCGCCGTATGTACAACCAAATGAAGTCAGTGCCATGGATTACGCCAGCCATAACATGTACTCAGAGGTGTTAGCTC
GCCAGGTTCAGTGGATAAATCACTATGGCCGCTTCTGGAAAAATTCTGCCCTGATGTGTGACTTCCGCTGGCCGGACTGT
GTGAATACACATCGTGAGGATCTCCGCGGTGCAACCGGCAATGATGAGGTGGGTGAGCAAGTCTGGTGGAACGCGGTAAC
CGGTGAAGGTATCAGCTATGTTGACGGTATCGAGCGTGGTCGCCGGATCTTTAACTTAGATAATGCAATTTGGGTGCTGC
AGGGGCGCCACCGTGATGATGCCAAGTTTGCCGATTATATCTATGACCAAAAGATGACCCACAACAAGCTACCCACCTAC
CTGTGGCCCGCCACAAACGAAGCCGGAGAGTGGGATTACCGTGAGATGCTGGGGCGTCAACATAGCCGCGAGGGCGTGGA
GGAGTGGAAGAGCCACTATTACCGTGCCGAAGGCTGGGATATTGCTACAGGCTGGCCAACTCGCTCACTGCTTGAGGGCA
TGGGCATGAAAGATGTTGCCGACCGATTGGAGCAAGTGGGTAAACTTGGCAGTGAGACGTAA

Upstream 100 bases:

>100_bases
CCGAGCTACCAGAACAAAACCTGCCCCAGAGTTACGTAGTCAATCTGCGAAATGAGAACTGGGCCAAGACCGGTAAGACC
ATCGAAGACTGAGAAATTCC

Downstream 100 bases:

>100_bases
TGTAATGACTATGACTACAGAATTTGCCAGGAAAATTACTCGTAAGCTGACGCCGGACGAAGAGTTGACGGCGGCAATTT
TGCGCAAACCACGTGGTATC

Product: aldehyde ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>713_residues
MKKLKGFAGKILHIDLNNLTHHILPTEDYYEWGGGHGFGAKLFWDLCEDIEAVTDGRDPRNVITIAGSPFSGTNVPSAGG
RCEVTNMSVGLIPRNRFTRSNFGGHFSSMMKHAGWDAVTVTGKAPYPVYIDVRNDHVMIREASHLWGKDTHETQQIIQED
VASVEVTSGWSGQLDGNSFGRTTQKASVLTVGQAGENQSALGCLIHGAGNAAGQGGSGAVFGSKNLKAISFIGTGAVEIA
DPEALIKARFITRDFYAADVDKSAAFAYPSLGGKPEAVTFSTMPTGHRVSSCHGCVNGCKQRNAIGYGNEVTCQTSLWYL
GAVRSYKFGGDAKLSLSNRGLELTEDSLYAGDLANKLGINTYPIMGLIPWLQKMHAKGELGSGKEIHSELPYELLGTREF
AEQFCQAIATGTDIGAHFIDGIVPGIESLGHGADVDNGTLHYPYYGMPEHGYDPRAELEWGYATLMTDRDMNDHGLNWIY
WTVNLAKLEGINFPIPAETLVTRFVEKMAPYVQPNEVSAMDYASHNMYSEVLARQVQWINHYGRFWKNSALMCDFRWPDC
VNTHREDLRGATGNDEVGEQVWWNAVTGEGISYVDGIERGRRIFNLDNAIWVLQGRHRDDAKFADYIYDQKMTHNKLPTY
LWPATNEAGEWDYREMLGRQHSREGVEEWKSHYYRAEGWDIATGWPTRSLLEGMGMKDVADRLEQVGKLGSET

Sequences:
NA

Specific function: NA

COG id: COG2414

COG function: function code C; Aldehyde:ferredoxin oxidoreductase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA