Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157375670

GI number:

Start: 3079852

End: 3081789

Strand: Reverse

Name: Not Available

Synonym: Ssed_2535

Alternate gene names: NA

Gene position: NA

Preceding gene: 157375671

Following gene: 157375669

Centisome position: NA

GC content: NA

Gene sequence:

>1938_bases
TTGACCAGCACAACGACAAGCAGACTGACAAAAGAGATCGCACTGGCGTTCGGAAGCGATGGCATGCTTGCCCGCCATAT
TCAAGGCTATAGCGCACGTGATGTGCAGGTTCAGATGGCTGAGGCCGTTTGTGATGCTATCAATAACAAGAGCGACCTGG
TTGTTGAAGCGGGCACCGGTGTCGGTAAAACCTTTGCGTATCTTATTCCTGCGTTGCTCAGTGGCAAGCAGGTGATTATC
AGTACCGGCAGTAAAAACCTGCAAGAGCAGCTGTTTTATAAAGACCTGCCCAGTTTACTCTCCATGTTGGACATTTCCCC
TAAGGTCGCACTGTTAAAAGGACGGAATAACTACCTGTGTCAGGATCTGATGGAGAAGCAGCTTAATGGTTGTGATTCAT
TAGATCCTAAGGTGTTAGACGACCTGTTGCGCATCAATCAGTGGGCGGGGCAGACCAGCGATGGCGATCTTGGCGGGTTA
ACCTCGGTCTCTGAAAATGCCGATGTGTTACCGCTTATTGCCAGCAGCCGCGAAAAGTGTACCGGGAAAAGGTGCGATCA
CTATGAGGTGTGCTTTACCCGCAAAGCGAGAAGTCGCGCCATGGATGCCAAGGTTATCGTGGTCAACCATCATCTGTTCT
TTGCCGACAGGGTGCTCAAAGAGACGGGGTTTGCCGAGCTGCTACCCGACTCCGATGTGGTGGTATTCGATGAGGCGCAC
TTGCTCAGTGATATTGCAGTGACCTATTTCGGTCAGCAAACTTCTACACGTGGCCTGACCGAACTGCTTAACTCCATTAT
CGAAATATATCGCAAGGAGCTGAGAGACTCGCCGCAGATTGAAGCCTTAACGTCTCGTTGCATCAGTCAGTTAAATGATT
GGCATCAACAGATGTTCGACCGCGATGGTTCTGATTGGCGTCAATTGATGGGTGACAAGGATCTGGCTGCCTGTTCATGG
GGACTATTAAAAGAACTTCAGTCACTCGAGGCCCTGTTGCAATCTCACGTGGGACGGAGTGAAGATCTGGATGATGGCCT
GGAGAAACTCAACGGATTTACCAATAAGTTAGCCCTGTTTTTTCAATGTGAAAATAATCAAGCTGCCTATAGTGTCGAGT
ATGGTCACCGTTATCTTACGTTACGTATCGCGCCAATCAATGTCGCTCGTGAGTGCGAGAAGCTGTTTGATGCCCAAACC
AGCTGGGTGTTTACCTCTGCAACCTTGCAGATAAACCGAGATCTGACCCTGTTTACCAAGGGACTCGGGATCGCCAAGGC
CAGGCAGTTGATCTTAGACAGTCCCTTCGATTACCCAAATAATGCGCTTTTATGTGTGCCAAGGCATCTGTCGAAGGTGA
GCAATCAGGAGGCTGCGGTCAGAGAGTTAGTCGATATTGCAACTCAGGCTATCAATGCCGCTCAGGGACGTACCTTCATC
CTGTTTACCAGTCATCGTATGATGAATGCCTGCGCAAGGGTGCTTCAAAGCAGGGTTGCCTATCCCTTGTTAGTGCAGGG
ACAGGGTAGCAAACAGAGTCTGCTAAAAAAGTTTCGTCAACTGGGTAATGGCGTGTTACTCGGAACCGGTGCATTCTGGG
AAGGGGTCGATGTGCGGGGTAAACTCCTGAGCTGCGTGATCATCGATAAACTGCCTTTTGTGTCACCCGATGATACGCTG
TATAAGGCCAGAGCCGACAGTATCTCCCGCGAGGGAAAAGATCCTTTCTCGACGATCTCATTGCCCCAGGCGGTGATCTC
ACTCAATCAAGGGGTAGGTCGATTGATACGTGACGAGAAAGACAAAGGTGTATTGATACTCTGTGATAACCGCATCGTTA
ACCGTCCATACGGTCAGGCCTTCCTGAACTCACTGCCGCCCATGGCAAGAACCCGGGACATGGGCAAGGTGGTGAATTTC
TTGAAACAGATAAAATAG

Upstream 100 bases:

>100_bases
CTTTGTATATAAATCTGAAAACGAGACTTGAAGCAGGATGATAATCAAGGATAATGCCCAGCTGATGATTTTCAATTTTC
CCGTCTGAGAAGAGAGCGTC

Downstream 100 bases:

>100_bases
GTACATAAGGAAATCGACCTTGAAGGTTTTAGTGACAGGAAGCGCTGGCAGAGTCGGACGCGCCATCTATATCAAGCTGA
TGCAGCAACACCATGTGGTC

Product: helicase C2

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>645_residues
MTSTTTSRLTKEIALAFGSDGMLARHIQGYSARDVQVQMAEAVCDAINNKSDLVVEAGTGVGKTFAYLIPALLSGKQVII
STGSKNLQEQLFYKDLPSLLSMLDISPKVALLKGRNNYLCQDLMEKQLNGCDSLDPKVLDDLLRINQWAGQTSDGDLGGL
TSVSENADVLPLIASSREKCTGKRCDHYEVCFTRKARSRAMDAKVIVVNHHLFFADRVLKETGFAELLPDSDVVVFDEAH
LLSDIAVTYFGQQTSTRGLTELLNSIIEIYRKELRDSPQIEALTSRCISQLNDWHQQMFDRDGSDWRQLMGDKDLAACSW
GLLKELQSLEALLQSHVGRSEDLDDGLEKLNGFTNKLALFFQCENNQAAYSVEYGHRYLTLRIAPINVARECEKLFDAQT
SWVFTSATLQINRDLTLFTKGLGIAKARQLILDSPFDYPNNALLCVPRHLSKVSNQEAAVRELVDIATQAINAAQGRTFI
LFTSHRMMNACARVLQSRVAYPLLVQGQGSKQSLLKKFRQLGNGVLLGTGAFWEGVDVRGKLLSCVIIDKLPFVSPDDTL
YKARADSISREGKDPFSTISLPQAVISLNQGVGRLIRDEKDKGVLILCDNRIVNRPYGQAFLNSLPPMARTRDMGKVVNF
LKQIK

Sequences:
NA

Specific function: NA

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA