| Definition | Shewanella sediminis HAW-EB3, complete genome. |
|---|---|
| Accession | NC_009831 |
| Length | 5,517,674 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 157375588
GI number:
Start: 2974857
End: 2976254
Strand: Reverse
Name: Not Available
Synonym: Ssed_2451
Alternate gene names: NA
Gene position: NA
Preceding gene: 157375589
Following gene: 157375587
Centisome position: NA
GC content: NA
Gene sequence:
>1398_bases ATGGCGCTAAGAAATCTTGTTTGGTTGATATGCACCGGCTTTCTATTGGTTCTGTATGTAACTCCAGTTGCAGCAATGGA CAGAAGCGATGCCGGGCTGAACTCTCTACGCTATCAGCTACAGCTAGTAAACTTAGTCAGACCAAGTAAGCAGTCTGAAG ATTCCTATCGAATATTACGAAGCGGTACAGTGCAGGAGAAACTCGACAGAGTCGGCGGTATTCAAGCTGACTTGAAATAT TTTTGGCAAAATAAAAATATTCCTAATGATGCCAATAGGCTAGATGACACAGAGGATCTTTACCAACGTGCCATCTCTTT AGAACCCACTTCGAGTGATTACCTTCCCGTTAGCAATAGACTGCGTTACTTGCTATGGCTAAGCGAGCATTATCCCTGGA AACCACTTGTTATTGGTGGCTGGCTTAAAGAGGGCGATTATCATAAATCGATACCTGAGATAAGTTTTCGGCTCAACATG CTAGGCGATTTAGATAGCTATGACAGAAACAACAAGCAACTGAACCGAACACTTGCAACTAGTTTACTGCGTTTCCAGCG ACGACATGGTTTAAAGCAAGATGCGATAATAGGGCCTGAGACCTTGAGATGGTTGAATGCTTCGCCTAAGAATCGAGCGC GTTTATTAGCAAACAACTTCTTAAAAAAATCCAGTTACTTAGCCTCATTGGATAGTCGATTTTTACTGATTAATATCCCG GCATTTGAGATGGTACTCGTTGACCATGATGAGATACAGCTAAAATCCAGGGTCATTGTCGGTAAACCCTATCGTCAAAC TCCCATGTTGAGTAGTCAAATATCTAATGTTGTTCTCAACCCCAGTTGGCGGGTACCCAGACGCCTGCTTTGGCGAGATC TATTACCTAAGGTGAGAGAGAATGGTAGCTATATTACTCAACGAAATTTTGATGTGTTCGATGCTAAAGGCGTGATCATT GAGAAAAGCCCTGATGAGTGGCAAGAGTTAGCCCAAGGCCGCTTTCCGTATCGATTGGTACAGAGACCCGGTGAAGAGAA TACATTAGGGCGGTACAAATTTTACTTTGCAAATGACTACAATGTTTACCTTCATGATACCGTCGACAAATCTCTGTTTG AAGAGTCTAACAGAGCGTTGTCATCTGGCTGTATTCGGGTCGAAAATGTGGAGAGCCTGGCAAATTGGATGGCATCGAAT TTAGTCAGGGATAAGCAAACCTGGGTAGATATGCAAGTTGAGAGGCAAAAAACACAATGGTTTTCTCTCGATGACTCCTT AGCCGTACATTTAGTATACTGGACCGCATGGATAGATAGTGAAGGGGACTCGCAATTTAGAAATGATATTTATAACCAAA ATTCAACAGGTAACCTTGCTTTAATCGAAAATCGATAG
Upstream 100 bases:
>100_bases TATTTTCCTCGCATGCCTTAAATTTTGCCATACTTGTATCAACTGCATCAGGAAAGTATGACGATTACTCACCCTGTGCT TGATATTAGAGAGGGGAATT
Downstream 100 bases:
>100_bases TTCAAAGCAAATCCTCACGTCGTTATCGCTTGTCTCGTTAACTTGATTTCACCGCCAATAACGTTTAGTTTATTGGCATT CGTGATTAAAAAGTAGGCAG
Product: peptidoglycan binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>465_residues MALRNLVWLICTGFLLVLYVTPVAAMDRSDAGLNSLRYQLQLVNLVRPSKQSEDSYRILRSGTVQEKLDRVGGIQADLKY FWQNKNIPNDANRLDDTEDLYQRAISLEPTSSDYLPVSNRLRYLLWLSEHYPWKPLVIGGWLKEGDYHKSIPEISFRLNM LGDLDSYDRNNKQLNRTLATSLLRFQRRHGLKQDAIIGPETLRWLNASPKNRARLLANNFLKKSSYLASLDSRFLLINIP AFEMVLVDHDEIQLKSRVIVGKPYRQTPMLSSQISNVVLNPSWRVPRRLLWRDLLPKVRENGSYITQRNFDVFDAKGVII EKSPDEWQELAQGRFPYRLVQRPGEENTLGRYKFYFANDYNVYLHDTVDKSLFEESNRALSSGCIRVENVESLANWMASN LVRDKQTWVDMQVERQKTQWFSLDDSLAVHLVYWTAWIDSEGDSQFRNDIYNQNSTGNLALIENR
Sequences:
NA
Specific function: NA
COG id: COG2989
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA